Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 1.4e-93 346.3 172 100.0
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 1.8e-85 319.3 172 93.0
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 4.9e-75 284.6 174 84.5
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 9.9e-68 260.4 178 78.7
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 2.4e-66 255.8 179 76.0
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 1.1e-63 246.9 177 74.6
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.1e-63 246.9 180 72.8
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 9.6e-63 243.8 181 74.0
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 2.1e-62 242.7 177 72.9
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 3.6e-62 241.9 176 72.2
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 6.2e-62 241.1 177 73.4
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.8e-61 239.6 197 66.5
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 9.3e-58 227.3 180 68.9
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 2.4e-53 212.6 177 65.0
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 7.1e-42 174.5 89 92.1
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 6.7e-40 167.9 149 61.1
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 8.7e-40 167.5 149 61.1
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 7.4e-39 164.5 182 56.0
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.1e-38 162.9 116 69.0
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 2.8e-38 162.5 150 60.0
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.8e-38 162.5 150 60.0
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 3.7e-38 162.2 116 69.0
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 4.8e-38 161.8 150 60.7
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 8.2e-38 161.0 169 53.8
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.4e-37 160.2 164 57.3
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 1.4e-37 160.2 164 57.3
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 4.0e-37 158.7 158 57.0
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 5.3e-37 158.3 89 82.0
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 5.3e-37 158.3 155 58.1
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 6.9e-37 157.9 149 57.0
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 6.9e-37 157.9 135 62.2
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.2e-36 157.1 158 54.4
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 1.2e-36 157.1 111 70.3
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 1.5e-36 156.8 135 62.2
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 2.0e-36 156.4 132 64.4
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 2.6e-36 156.0 111 69.4
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 3.4e-36 155.6 133 60.2
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 3.4e-36 155.6 149 57.7
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 4.5e-36 155.2 90 80.0
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 5.8e-36 154.8 133 60.9
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 7.6e-36 154.5 120 66.7
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 7.6e-36 154.5 130 62.3
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 7.6e-36 154.5 133 58.6
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.0e-35 154.1 96 74.0
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 1.3e-35 153.7 120 63.3
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.7e-35 153.3 136 62.5
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 2.2e-35 152.9 120 65.0
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 2.9e-35 152.5 133 59.4
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 3.8e-35 152.1 136 60.3
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 4.9e-35 151.8 139 59.0
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 6.5e-35 151.4 145 57.2
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 6.5e-35 151.4 145 58.6
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 6.5e-35 151.4 107 68.2
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 1.1e-34 150.6 146 57.5
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 1.1e-34 150.6 100 73.0
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 1.4e-34 150.2 136 60.3
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.4e-34 150.2 160 51.2
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.4e-34 150.2 160 51.2
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 1.4e-34 150.2 110 67.3
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 2.5e-34 149.4 98 73.5
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 4.2e-34 148.7 127 61.4
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 5.5e-34 148.3 94 76.6
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 5.5e-34 148.3 113 63.7
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 7.1e-34 147.9 136 58.8
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.2e-33 147.1 107 67.3
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 1.6e-33 146.7 92 73.9
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 2.1e-33 146.4 165 50.3
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.7e-33 146.0 106 67.0
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 3.5e-33 145.6 101 70.3
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 6.0e-33 144.8 146 56.8
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 6.0e-33 144.8 160 53.1
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 6.0e-33 144.8 101 70.3
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 7.9e-33 144.4 144 56.2
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 7.9e-33 144.4 101 71.3
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 1.3e-32 143.7 123 57.7
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 1.3e-32 143.7 135 57.8
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 1.8e-32 143.3 135 58.5
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 2.3e-32 142.9 109 64.2
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 3.0e-32 142.5 89 76.4
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 3.0e-32 142.5 89 77.5
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 5.1e-32 141.7 120 60.8
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 6.7e-32 141.4 89 73.0
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 8.7e-32 141.0 94 74.5
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 1.1e-31 140.6 104 65.4
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 1.1e-31 140.6 91 73.6
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 2.5e-31 139.4 91 70.3
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 4.3e-31 138.7 105 63.8
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 5.7e-31 138.3 129 61.2
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 2.2e-30 136.3 107 63.6
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 4.8e-30 135.2 101 65.3
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 3.1e-29 132.5 81 77.8
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 9.0e-29 131.0 95 66.3
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 3.8e-27 125.6 107 56.1
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 2.5e-26 122.9 73 78.1
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 2.5e-26 122.9 73 78.1
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 3.2e-26 122.5 129 58.1
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 5.5e-26 121.7 130 51.5
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.6e-25 120.2 91 62.6
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 3.6e-25 119.0 91 63.7
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 3.6e-25 119.0 91 64.8
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.3e-24 117.1 103 57.3
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 3.0e-24 115.9 94 60.6
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 6.7e-24 114.8 92 59.8
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 3.7e-22 109.0 87 60.9
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 1.1e-21 107.5 99 56.6
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 1.4e-21 107.1 84 63.1
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 9.1e-21 104.4 108 50.0
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 9.1e-21 104.4 124 51.6
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 2.9e-19 99.4 109 48.6
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 5.0e-19 98.6 101 54.5
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 9.4e-18 94.4 127 47.2
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.8e-16 90.1 94 44.7
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 3.4e-12 75.9 89 41.6
CARHR118050 Cardamine hirsuta HOM05D006702 ORTHO05D008540 1.4e-10 70.5 68 64.7
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 1.2e-09 67.4 56 53.6
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.7e-09 66.2 89 46.1
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.7e-09 66.2 89 46.1
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.0e-08 64.3 40 72.5
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 1.5e-07 60.5 50 64.0


User provided reference genes

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