Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 6.4e-93 344.0 163 100.0
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 3.1e-87 325.1 163 93.3
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 2.7e-83 312.0 163 89.0
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 3.0e-82 308.5 163 86.5
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 9.6e-81 303.5 163 84.7
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 6.2e-80 300.8 163 83.4
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 1.4e-79 299.7 156 87.8
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 2.1e-75 285.8 161 81.4
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 3.5e-75 285.0 167 81.4
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 9.0e-71 270.4 138 87.0
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 7.7e-70 267.3 138 86.2
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 5.0e-69 264.6 165 75.8
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 3.2e-68 261.9 162 72.8
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 7.2e-68 260.8 166 75.3
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 7.9e-67 257.3 165 71.5
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 1.8e-66 256.1 162 72.8
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.1e-66 254.6 160 71.9
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.5e-65 253.1 165 70.3
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.5e-65 253.1 164 70.7
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.5e-65 253.1 165 69.7
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.5e-65 253.1 165 69.7
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 2.0e-65 252.7 160 73.1
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 4.3e-65 251.5 160 72.5
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 4.3e-65 251.5 159 71.1
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 5.7e-65 251.1 166 68.7
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 7.4e-65 250.8 163 69.9
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 7.4e-65 250.8 159 71.1
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.3e-64 250.0 160 72.5
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.7e-64 249.6 162 71.0
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 4.8e-64 248.1 160 71.2
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 8.2e-64 247.3 162 71.0
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 1.4e-63 246.5 164 68.3
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 1.8e-63 246.1 160 70.6
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 3.1e-63 245.4 162 68.5
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 4.1e-63 245.0 164 67.1
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 4.1e-63 245.0 164 66.5
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 6.9e-63 244.2 162 67.9
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 1.5e-62 243.0 165 66.7
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 2.0e-62 242.7 163 69.9
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 2.0e-62 242.7 164 65.9
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 4.5e-62 241.5 161 68.9
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 4.5e-62 241.5 164 67.7
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 5.9e-62 241.1 163 66.9
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 1.3e-61 240.0 163 68.7
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 2.2e-61 239.2 162 67.3
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 2.9e-61 238.8 164 67.1
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 2.9e-61 238.8 163 68.1
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 3.8e-61 238.4 165 64.8
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 5.0e-61 238.0 165 67.3
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 5.0e-61 238.0 161 68.3
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 6.5e-61 237.7 164 67.1
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.1e-60 236.9 166 66.9
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 1.1e-60 236.9 162 67.9
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 1.9e-60 236.1 163 68.1
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 2.5e-60 235.7 166 67.5
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.2e-60 235.3 164 65.2
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 5.5e-60 234.6 159 69.2
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 5.5e-60 234.6 162 67.9
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.6e-59 233.0 164 65.2
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 4.7e-59 231.5 162 67.3
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 6.1e-59 231.1 165 64.8
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 6.1e-59 231.1 160 66.9
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 7.9e-59 230.7 158 67.1
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 7.9e-59 230.7 162 64.8
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 1.4e-58 229.9 163 65.6
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.4e-58 229.9 163 65.6
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 3.0e-58 228.8 160 64.4
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 3.0e-58 228.8 160 66.9
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 3.0e-58 228.8 160 63.1
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 1.5e-57 226.5 160 62.5
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 3.3e-57 225.3 166 65.1
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 4.4e-57 224.9 164 63.4
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 7.4e-57 224.2 164 63.4
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 2.2e-56 222.6 163 66.9
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 2.2e-56 222.6 162 65.4
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 8.2e-56 220.7 166 63.9
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 2.4e-55 219.2 168 61.3
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 4.1e-55 218.4 161 61.5
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 9.1e-55 217.2 164 64.0
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 1.2e-54 216.9 164 64.0
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.5e-52 209.9 160 61.2
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.9e-52 209.5 160 61.2
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 7.2e-52 207.6 140 67.9
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 7.2e-52 207.6 160 61.9
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.2e-51 206.8 162 61.7
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 1.0e-50 203.8 155 61.3
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 3.0e-50 202.2 165 58.2
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 5.2e-50 201.4 165 57.6
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 6.7e-50 201.1 164 61.0
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 4.4e-49 198.4 170 58.8
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 5.7e-49 198.0 134 70.1
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.7e-48 196.4 143 62.9
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 6.3e-48 194.5 159 58.5
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 2.0e-46 189.5 159 57.2
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 1.1e-44 183.7 164 56.7
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 1.1e-44 183.7 165 58.2
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 1.9e-44 183.0 163 52.1
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.2e-43 180.3 120 65.8
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 4.7e-43 178.3 165 55.8
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 6.8e-42 174.5 167 55.7
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 2.0e-41 172.9 127 65.4
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 9.7e-41 170.6 172 52.3
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.4e-39 166.8 114 66.7
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 3.5e-38 162.2 157 49.7
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 2.2e-37 159.5 161 50.3
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 2.9e-37 159.1 161 46.6
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 7.2e-36 154.5 159 45.3
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 4.7e-35 151.8 165 49.1
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 9.8e-33 144.1 144 50.0
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.8e-31 139.8 149 49.0
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 4.1e-31 138.7 164 43.3
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 1.6e-27 126.7 132 51.5
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 8.9e-26 120.9 160 44.4
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.7e-24 116.7 83 62.7
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 3.7e-24 115.5 93 55.9
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.2e-22 110.5 88 62.5
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.6e-17 92.8 55 72.7
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 9.8e-17 90.9 149 37.6
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 9.5e-12 74.3 116 40.5
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 2.0e-09 66.6 44 63.6


User provided reference genes

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