Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G10750 Arabidopsis lyrata HOM05D013727 ORTHO05D003520 2.1e-191 672.5 428 100.0
AT5G01370 Arabidopsis thaliana HOM05D013727 ORTHO05D003520 1.2e-175 620.2 430 87.7
Thhalv10016075m.g Eutrema salsugineum HOM05D013727 ORTHO05D003520 2.7e-159 565.8 431 81.2
Carub.0006s0045 Capsella rubella HOM05D013727 ORTHO05D003520 4.7e-159 565.1 427 82.9
CARHR211750 Cardamine hirsuta HOM05D013727 ORTHO05D003520 1.6e-143 513.5 433 76.4
BolC2t06018H Brassica oleracea HOM05D013727 ORTHO05D003520 8.3e-132 474.6 430 71.6
Sp6g40680 Schrenkiella parvula HOM05D013727 ORTHO05D003520 1.5e-120 437.2 430 68.6
Aa31LG1G23030 Aethionema arabicum HOM05D013727 ORTHO05D003520 8.3e-116 421.4 436 63.3
BraA02t04692Z Brassica rapa HOM05D013727 ORTHO05D003520 6.4e-108 395.2 432 66.9
THA.LOC104816197 Tarenaya hassleriana HOM05D013727 ORTHO05D003520 6.2e-95 352.1 449 54.8
C02p00200 Brassica napus HOM05D013727 ORTHO05D003520 6.5e-68 262.3 346 59.8
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 4.9e-23 113.2 456 29.8
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 8.3e-23 112.5 451 28.8
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 1.1e-22 112.1 445 30.3
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 1.1e-22 112.1 439 28.2
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.3e-20 105.1 427 28.8
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 1.2e-18 98.6 427 28.6
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 1.2e-18 98.6 449 28.1
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 2.1e-18 97.8 438 26.0
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 6.1e-18 96.3 441 28.1
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 5.2e-17 93.2 436 27.8
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 6.8e-17 92.8 461 26.2
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 6.8e-17 92.8 459 28.1
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 5.7e-16 89.7 250 36.0
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.4e-14 84.3 450 25.8
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.4e-14 84.3 450 25.6
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 3.2e-14 84.0 316 28.8
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 3.2e-14 84.0 460 25.9
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 4.1e-14 83.6 445 24.5
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 5.4e-14 83.2 431 27.4
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 1.2e-13 82.0 422 24.9
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 2.7e-13 80.9 425 25.4
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 3.5e-13 80.5 423 27.4
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 4.6e-13 80.1 417 28.1
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.0e-12 79.0 425 25.2
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 2.9e-12 77.4 321 26.8
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 2.9e-12 77.4 311 32.5
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 3.9e-12 77.0 455 25.9
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 1.1e-11 75.5 460 26.1
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.3e-11 73.9 446 26.0
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 4.3e-11 73.6 430 24.7
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 1.2e-10 72.0 427 24.6
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 2.8e-10 70.9 328 25.9
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.8e-10 70.9 455 25.3
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 4.7e-10 70.1 455 24.6
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.4e-09 68.6 461 21.7
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 1.4e-09 68.6 425 24.7
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.1e-09 67.4 446 25.3
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.5e-08 65.1 335 28.1
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 2.6e-08 64.3 185 30.3
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 5.8e-08 63.2 443 23.7
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.3e-07 62.0 452 22.3
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.2e-07 61.2 441 25.4
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 2.2e-07 61.2 334 28.4
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 2.9e-07 60.8 429 24.0
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 3.7e-07 60.5 427 24.1
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 3.7e-07 60.5 446 23.1
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 3.7e-07 60.5 427 23.0
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 6.4e-07 59.7 111 38.7
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 1.1e-06 58.9 317 27.1
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 1.1e-06 58.9 349 26.9
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.9e-06 58.2 111 32.4
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 3.2e-06 57.4 301 31.2
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 3.2e-06 57.4 241 29.9
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 4.1e-06 57.0 460 23.7
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 4.1e-06 57.0 234 29.9
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 4.1e-06 57.0 232 26.7
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 4.1e-06 57.0 464 23.9
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 4.1e-06 57.0 111 33.3
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 5.4e-06 56.6 169 31.4
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 5.4e-06 56.6 292 25.0
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 7.0e-06 56.2 343 26.5
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 7.0e-06 56.2 466 22.7
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 7.0e-06 56.2 300 26.0
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 7.0e-06 56.2 433 24.5
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 9.2e-06 55.8 166 28.9


User provided reference genes

Program Settings