Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 3.6e-312 1073.5 522 100.0
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 6.4e-304 1046.6 509 97.8
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 3.2e-303 1044.3 508 97.0
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 1.1e-300 1035.8 522 95.0
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 7.4e-292 1006.5 505 94.3
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.3e-291 1005.7 495 95.4
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 5.5e-279 963.8 508 89.4
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 9.4e-279 963.0 508 89.4
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 9.4e-279 963.0 508 89.4
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 1.2e-278 962.6 509 89.8
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.7e-275 952.2 506 88.3
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 3.7e-275 951.0 506 88.1
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 1.5e-268 929.1 508 84.3
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 2.8e-267 924.9 509 84.7
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.6e-239 830.9 511 75.3
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 7.3e-239 830.5 511 75.3
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 1.6e-238 829.3 506 74.9
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 1.0e-237 826.6 499 75.4
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.3e-237 825.5 511 75.0
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.2e-236 823.2 509 74.5
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 2.0e-236 822.4 507 74.0
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 4.1e-234 814.7 509 73.5
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 7.8e-233 810.4 490 75.7
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 8.6e-232 807.0 509 72.9
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 1.1e-231 806.6 511 72.6
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 2.5e-231 805.4 495 74.7
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 3.6e-230 801.6 506 73.5
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 3.1e-229 798.5 497 73.2
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 1.7e-227 792.7 511 72.6
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 2.2e-227 792.3 499 74.9
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.9e-227 791.2 509 72.3
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.4e-226 789.6 509 72.3
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 3.2e-226 788.5 517 71.6
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.1e-226 788.1 509 72.1
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.1e-226 788.1 509 72.1
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 5.4e-226 787.7 492 74.0
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 4.6e-225 784.6 499 72.1
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 6.0e-225 784.3 510 71.4
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 7.8e-225 783.9 509 71.9
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 5.0e-224 781.2 492 73.6
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.9e-223 779.2 521 70.6
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 1.9e-223 779.2 493 72.6
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 3.3e-223 778.5 493 72.2
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 3.6e-222 775.0 499 72.1
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 1.8e-221 772.7 507 71.2
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 4.0e-221 771.5 512 70.7
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 5.2e-221 771.2 502 70.9
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 4.4e-220 768.1 488 71.9
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 7.5e-220 767.3 535 67.5
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.9e-218 762.7 500 71.2
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.4e-218 762.3 502 71.1
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 3.2e-218 761.9 500 70.0
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 2.1e-217 759.2 513 69.4
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 3.5e-217 758.4 502 71.1
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 3.0e-216 755.4 501 69.7
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 3.3e-215 751.9 488 72.5
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 4.3e-215 751.5 487 71.5
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 5.6e-215 751.1 507 69.6
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.8e-213 746.1 506 69.8
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 5.2e-213 744.6 481 72.1
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.2e-212 743.4 500 67.8
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 2.0e-212 742.7 504 69.0
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 3.4e-212 741.9 488 70.9
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 9.9e-212 740.3 501 67.9
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 3.8e-211 738.4 512 70.3
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 3.8e-211 738.4 509 68.8
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 6.4e-211 737.6 502 68.9
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.4e-210 736.5 501 69.9
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 5.4e-210 734.6 501 66.9
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 9.2e-210 733.8 498 69.1
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 1.3e-208 729.9 581 62.0
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 3.0e-208 728.8 511 67.3
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 7.3e-207 724.2 494 69.0
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 7.3e-207 724.2 494 69.0
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 7.3e-207 724.2 499 66.9
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 7.3e-207 724.2 506 66.0
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 6.2e-206 721.1 517 65.8
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 8.1e-206 720.7 513 66.1
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 1.8e-205 719.5 503 65.8
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.8e-205 719.5 496 69.2
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 2.4e-205 719.2 509 65.6
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 2.0e-204 716.1 511 65.4
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.7e-203 713.0 509 65.0
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 4.3e-199 698.4 486 67.5
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 1.8e-197 693.0 462 69.7
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 2.6e-196 689.1 515 63.1
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 7.6e-196 687.6 515 62.7
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 6.2e-190 667.9 491 65.4
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 4.6e-185 651.7 497 61.8
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.1e-183 647.1 515 60.8
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.4e-181 640.2 429 70.2
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 1.0e-179 634.0 430 67.7
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 6.5e-179 631.3 509 63.1
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.5e-178 629.4 502 61.8
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 2.5e-178 629.4 519 58.8
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 8.7e-176 620.9 503 58.4
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.5e-172 610.1 514 58.0
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 5.9e-172 608.2 351 78.3
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 8.5e-171 604.4 507 58.8
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.4e-168 597.0 457 60.4
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 1.3e-163 580.5 418 66.5
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.6e-161 573.5 407 68.1
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.8e-120 437.2 383 54.0
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 5.8e-119 432.2 389 52.2
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 5.8e-119 432.2 398 52.0
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 7.8e-116 421.8 261 72.8
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 4.3e-114 416.0 385 51.2
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 9.2e-109 398.3 386 48.4
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 4.3e-74 283.1 172 75.0
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 1.4e-61 241.5 160 65.6
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 1.1e-53 215.3 120 81.7
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 8.8e-35 152.5 337 29.7
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 3.7e-33 147.1 110 61.8
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 1.6e-31 141.7 132 55.3
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 4.2e-29 133.7 83 78.3
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 4.2e-29 133.7 83 78.3
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 4.2e-29 133.7 83 78.3
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 4.2e-21 107.1 82 57.3
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 1.7e-14 85.1 54 66.7
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 4.9e-09 67.0 71 38.0
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 2.7e-07 61.2 58 36.2


User provided reference genes

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