Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G10120 Arabidopsis lyrata HOM05D006969 ORTHO05D008826 2.7e-73 278.9 176 100.0
Carub.0024s0013 Capsella rubella HOM05D006969 ORTHO05D008826 3.6e-49 198.7 156 77.6
AT5G01910 Arabidopsis thaliana HOM05D006969 ORTHO05D008826 6.2e-49 198.0 136 85.3
BcaB01g06123 Brassica carinata HOM05D006969 ORTHO05D008826 9.9e-39 164.1 156 64.7
CARHR212260 Cardamine hirsuta HOM05D006969 ORTHO05D008826 1.3e-38 163.7 130 75.4
BraA03t09395Z Brassica rapa HOM05D006969 ORTHO05D008826 1.7e-38 163.3 156 64.1
BolC3t12589H Brassica oleracea HOM05D006969 ORTHO05D008826 2.9e-38 162.5 158 63.9
Aa31LG5G11450 Aethionema arabicum HOM05D006969 ORTHO05D008826 4.9e-38 161.8 158 65.8
Sp6g41160 Schrenkiella parvula HOM05D006969 ORTHO05D008826 4.1e-37 158.7 175 60.0
Thhalv10015463m.g Eutrema salsugineum HOM05D006969 ORTHO05D008826 1.0e-35 154.1 143 66.4
C03p00200 Brassica napus HOM05D006969 ORTHO05D008826 5.8e-31 138.3 136 64.0
BcaB01g04376 Brassica carinata HOM05D006969 ORTHO05D008826 2.2e-30 136.3 145 60.0
A03p00060 Brassica napus HOM05D006969 ORTHO05D008826 3.8e-30 135.6 125 66.4
Potri.006G109400 Populus trichocarpa HOM05D006969 ORTHO05D008826 5.2e-24 115.2 143 54.5
Potri.016G138300 Populus trichocarpa HOM05D006969 ORTHO05D008826 1.2e-23 114.0 159 50.9
Manes.09G123300 Manihot esculenta HOM05D006969 ORTHO05D008826 1.5e-23 113.6 142 50.7
Sabra04G0154500 Salix brachista HOM05D006969 ORTHO05D008826 2.0e-23 113.2 161 49.7
THA.LOC104823322 Tarenaya hassleriana HOM05D006969 ORTHO05D008826 4.4e-23 112.1 143 53.1
Cpa.g.sc86.76 Carica papaya HOM05D006969 ORTHO05D008826 2.9e-22 109.4 141 54.6
Sed0006435 Sechium edule HOM05D006969 ORTHO05D008826 6.4e-22 108.2 165 47.9
Sabra06G0085100 Salix brachista HOM05D006969 ORTHO05D008826 1.1e-21 107.5 143 52.4
CsaV3_4G027220 Cucumis sativus L. HOM05D006969 ORTHO05D008826 3.2e-21 105.9 169 46.2
PGR004G2771 Punica granatum HOM05D006969 ORTHO05D008826 3.2e-21 105.9 165 45.5
Cfa017015 Carpinus fangiana HOM05D006969 ORTHO05D008826 5.4e-21 105.1 152 47.4
TWI74G1273 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 5.4e-21 105.1 149 47.7
Haze_21189 Corylus avellana HOM05D006969 ORTHO05D008826 7.1e-21 104.8 154 46.1
ClCG04G006330 Citrullus lanatus HOM05D006969 ORTHO05D008826 1.2e-20 104.0 175 44.6
Ah.15g089930 Amaranthus hybridus HOM05D006969 ORTHO05D008826 2.7e-20 102.8 143 47.6
Duzib212G0164 Durio zibethinus HOM05D006969 ORTHO05D008826 2.7e-20 102.8 152 46.1
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 7.8e-20 101.3 140 47.1
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 7.8e-20 101.3 140 47.1
Prupe.6G295300 Prunus persica HOM05D006969 ORTHO05D008826 7.8e-20 101.3 141 48.2
Dinv16967 Davidia involucrata HOM05D006969 ORTHO05D008826 1.0e-19 100.9 141 48.2
MD04G1175800 Malus domestica HOM05D006969 ORTHO05D008826 1.7e-19 100.1 107 55.1
RcHm_v2.0_Chr3g0460321 Rosa chinensis HOM05D006969 ORTHO05D008826 1.7e-19 100.1 167 46.1
FAN05G1635 Fragaria x ananassa HOM05D006969 ORTHO05D008826 3.9e-19 99.0 144 45.1
Medtr7g073500 Medicago truncatula HOM05D006969 ORTHO05D008826 3.9e-19 99.0 88 60.2
DCAR_023968 Daucus carota HOM05D006969 ORTHO05D008826 6.6e-19 98.2 90 61.1
FAN02G3877 Fragaria x ananassa HOM05D006969 ORTHO05D008826 6.6e-19 98.2 144 45.8
Cc06_g18790 Coffea canephora HOM05D006969 ORTHO05D008826 1.1e-18 97.4 151 45.0
FvH4_6g09670 Fragaria vesca HOM05D006969 ORTHO05D008826 1.5e-18 97.1 144 45.1
FAN09G3593 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.5e-18 97.1 144 45.1
FAN14G4271 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.5e-18 97.1 144 45.1
TAR623G0846 Trochodendron aralioides HOM05D006969 ORTHO05D008826 1.5e-18 97.1 162 42.0
Sc20g0007050 Simmondsia chinensis HOM05D006969 ORTHO05D008826 1.9e-18 96.7 113 52.2
Atru.chr8.92 Acer truncatum HOM05D006969 ORTHO05D008826 2.5e-18 96.3 111 49.5
CiPaw.10G165400 Carya illinoinensis HOM05D006969 ORTHO05D008826 2.5e-18 96.3 155 43.2
TPR.G24295 Trifolium pratense HOM05D006969 ORTHO05D008826 2.5e-18 96.3 98 56.1
Psat3g118680 Pisum sativum HOM05D006969 ORTHO05D008826 3.3e-18 95.9 87 60.9
Solyc06g082850.4 Solanum lycopersicum HOM05D006969 ORTHO05D008826 3.3e-18 95.9 167 42.5
CANSAT25G2928 Cannabis sativa HOM05D006969 ORTHO05D008826 4.3e-18 95.5 178 39.9
Gohir.D10G112800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 7.3e-18 94.7 84 59.5
Gorai.011G124600 Gossypium raimondii HOM05D006969 ORTHO05D008826 7.3e-18 94.7 84 59.5
Sopen06g034210 Solanum pennellii HOM05D006969 ORTHO05D008826 7.3e-18 94.7 167 42.5
Hund19755 Selenicereus undatus HOM05D006969 ORTHO05D008826 1.3e-17 94.0 137 48.2
Thecc.04G150100 Theobroma cacao HOM05D006969 ORTHO05D008826 1.3e-17 94.0 117 48.7
Gohir.A10G153400 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.6e-17 93.6 110 51.8
Ciclev10013711m.g Citrus clementina HOM05D006969 ORTHO05D008826 2.8e-17 92.8 87 59.8
MELO3C025225.2 Cucumis melo HOM05D006969 ORTHO05D008826 2.8e-17 92.8 185 40.5
TWI77G0392 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 2.8e-17 92.8 89 59.6
VMungo1383G3295 Vigna mungo HOM05D006969 ORTHO05D008826 3.6e-17 92.4 87 57.5
QL07p031897 Quercus lobata HOM05D006969 ORTHO05D008826 8.1e-17 91.3 111 49.5
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea HOM05D006969 ORTHO05D008826 1.1e-16 90.9 86 59.3
Lj1g0009458 Lotus japonicus HOM05D006969 ORTHO05D008826 1.1e-16 90.9 88 56.8
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea HOM05D006969 ORTHO05D008826 1.4e-16 90.5 86 59.3
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea HOM05D006969 ORTHO05D008826 1.8e-16 90.1 86 58.1
HanXRQChr01g0000581 Helianthus annuus HOM05D006969 ORTHO05D008826 1.8e-16 90.1 108 46.3
Migut.J00029 Erythranthe guttata HOM05D006969 ORTHO05D008826 2.4e-16 89.7 109 49.5
Glyma.18G213000 Glycine max HOM05D006969 ORTHO05D008826 2.4e-16 89.7 87 56.3
MSTRG.18936 Avicennia marina HOM05D006969 ORTHO05D008826 3.1e-16 89.4 105 48.6
Gohir.D02G003100 Gossypium hirsutum HOM05D006969 ORTHO05D008826 3.1e-16 89.4 84 57.1
Phvul.008G081600 Phaseolus vulgaris HOM05D006969 ORTHO05D008826 3.1e-16 89.4 111 47.7
Glyma.09G273800 Glycine max HOM05D006969 ORTHO05D008826 4.0e-16 89.0 138 44.2
Gohir.A02G002800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 4.0e-16 89.0 99 53.5
Gorai.005G003600 Gossypium raimondii HOM05D006969 ORTHO05D008826 5.3e-16 88.6 99 53.5
Lalb_Chr01g0023811 Lupinus albus HOM05D006969 ORTHO05D008826 9.0e-16 87.8 144 43.1
AUR62006430 Chenopodium quinoa HOM05D006969 ORTHO05D008826 1.2e-15 87.4 111 46.8
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 2.0e-15 86.7 86 57.0
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.0e-15 86.7 86 57.0
ECA248G1739 Erigeron canadensis HOM05D000251 ORTHO05D002506 2.0e-15 86.7 132 43.9
MD05G1222900 Malus domestica HOM05D006969 ORTHO05D008826 2.0e-15 86.7 114 46.5
MD12G1190200 Malus domestica HOM05D006969 ORTHO05D008826 2.0e-15 86.7 114 46.5
PGSC0003DMG400027666 Solanum tuberosum HOM05D006969 ORTHO05D008826 2.0e-15 86.7 136 44.1
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea HOM05D006969 ORTHO05D008826 2.6e-15 86.3 86 57.0
AUR62029780 Chenopodium quinoa HOM05D006969 ORTHO05D008826 2.6e-15 86.3 92 52.2
Nitab4.5_0002758g0050 Nicotiana tabacum HOM05D006969 ORTHO05D008826 2.6e-15 86.3 126 48.4
Nitab4.5_0000430g0190 Nicotiana tabacum HOM05D006969 ORTHO05D008826 3.4e-15 85.9 126 50.0
vmacro08948 Vaccinium macrocarpon HOM05D006969 ORTHO05D008826 7.6e-15 84.7 112 49.1
MSTRG.5490 Avicennia marina HOM05D006969 ORTHO05D008826 9.9e-15 84.3 138 42.8
Peaxi162Scf00732g00235 Petunia axillaris HOM05D006969 ORTHO05D008826 1.3e-14 84.0 125 45.6
QL07p007469 Quercus lobata HOM05D006969 ORTHO05D008826 1.3e-14 84.0 71 63.4
EL10Ac7g17114 Beta vulgaris HOM05D006969 ORTHO05D008826 1.7e-14 83.6 110 47.3
Nitab4.5_0000048g0110 Nicotiana tabacum HOM05D006969 ORTHO05D008826 1.7e-14 83.6 126 49.2
GSVIVG01030170001 Vitis vinifera HOM05D006969 ORTHO05D008826 2.9e-14 82.8 162 40.7
COL.COLO4_03930 Corchorus olitorius HOM05D006969 ORTHO05D008826 3.8e-14 82.4 79 58.2
Duzib151G0817 Durio zibethinus HOM05D006969 ORTHO05D008826 6.4e-14 81.6 142 40.1
Rhsim04G0121200 Rhododendron simsii HOM05D006969 ORTHO05D008826 8.4e-14 81.3 152 41.4
SalBow7G4609 Salvia bowleyana HOM05D006969 ORTHO05D008826 1.1e-13 80.9 93 52.7
unitig_22.g6613 Utricularia gibba HOM05D006969 ORTHO05D008826 1.1e-13 80.9 88 51.1
Aqoxy2G00712 Aquilegia oxysepala HOM05D006969 ORTHO05D008826 2.7e-12 76.3 111 42.3
PSO339G3220 Papaver somniferum HOM05D006969 ORTHO05D008826 1.0e-11 74.3 117 41.0
PSO384G0233 Papaver somniferum HOM05D006969 ORTHO05D008826 1.0e-11 74.3 117 41.0
Oeu038184.1 Olea europaea HOM05D006969 ORTHO05D008826 1.3e-11 73.9 121 41.3
Rhsim04G0114700 Rhododendron simsii HOM05D006969 ORTHO05D008826 2.3e-11 73.2 75 60.0
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 5.1e-11 72.0 120 40.8
vmacro08947 Vaccinium macrocarpon HOM05D000266 ORTHO05D008826 1.1e-10 70.9 64 62.5
Lsat_1_v5_gn_5_152061 Lactuca sativa HOM05D006969 ORTHO05D008826 1.9e-10 70.1 115 40.9
CDE06G1555 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 3.3e-10 69.3 86 47.7
unitig_8.g3270 Utricularia gibba HOM05D006969 ORTHO05D008826 3.3e-10 69.3 79 46.8
Nitab4.5_0002655g0130 Nicotiana tabacum HOM05D006969 ORTHO05D008826 4.3e-10 68.9 95 44.2
Oeu060427.1 Olea europaea HOM05D006969 ORTHO05D008826 2.1e-09 66.6 58 58.6
Rhsim08G0240100 Rhododendron simsii HOM05D006969 ORTHO05D008826 6.2e-09 65.1 70 58.6
Rhsim03G0028100 Rhododendron simsii HOM05D006969 ORTHO05D008826 8.1e-09 64.7 70 57.1
Nn5g26829 Nelumbo nucifera HOM05D006969 ORTHO05D008826 5.3e-08 62.0 112 42.0


User provided reference genes

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