Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 1.7e-38 162.2 81 100.0
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 3.2e-37 157.9 81 96.3
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 1.6e-36 155.6 81 95.1
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 1.5e-34 149.1 81 87.7
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 2.8e-33 144.8 81 85.2
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 6.3e-33 143.7 81 85.2
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 4.1e-32 141.0 81 82.7
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 5.9e-31 137.1 81 81.5
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 1.7e-30 135.6 78 82.1
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 6.6e-30 133.7 78 80.8
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 1.5e-29 132.5 78 78.2
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 1.4e-27 125.9 81 76.5
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 1.4e-27 125.9 81 76.5
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 6.4e-25 117.1 70 77.1
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 6.4e-25 117.1 70 77.1
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 5.4e-24 114.0 80 66.2
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 7.0e-24 113.6 80 66.2
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 7.0e-24 113.6 81 64.2
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 1.2e-23 112.8 80 65.0
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 1.2e-23 112.8 80 65.0
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 7.8e-23 110.2 81 61.7
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 7.8e-23 110.2 81 61.7
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 1.0e-22 109.8 81 64.2
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 1.0e-22 109.8 77 68.8
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 1.3e-22 109.4 81 66.7
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 1.7e-22 109.0 78 62.8
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 2.3e-22 108.6 76 67.1
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 5.0e-22 107.5 78 62.8
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 6.6e-22 107.1 79 63.3
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 1.1e-21 106.3 73 69.9
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.1e-21 106.3 77 63.6
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 1.1e-21 106.3 81 64.2
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 1.5e-21 105.9 80 63.8
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 2.5e-21 105.1 81 61.7
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 2.5e-21 105.1 81 61.7
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 4.3e-21 104.4 78 62.8
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 5.6e-21 104.0 81 61.7
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 9.5e-21 103.2 77 62.3
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 9.5e-21 103.2 71 69.0
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 1.6e-20 102.4 79 60.8
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 2.1e-20 102.1 78 59.0
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 2.1e-20 102.1 78 60.3
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 2.8e-20 101.7 77 61.0
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 2.8e-20 101.7 79 60.8
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 3.6e-20 101.3 80 58.8
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 3.6e-20 101.3 79 58.2
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 4.7e-20 100.9 70 68.6
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 8.0e-20 100.1 77 61.0
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 8.0e-20 100.1 72 65.3
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 8.0e-20 100.1 80 62.5
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 1.1e-19 99.8 78 59.0
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 1.4e-19 99.4 78 57.7
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 1.8e-19 99.0 82 58.5
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 1.8e-19 99.0 64 70.3
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 3.1e-19 98.2 74 60.8
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 4.0e-19 97.8 81 55.6
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 5.2e-19 97.4 79 53.2
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 5.2e-19 97.4 75 60.0
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 6.8e-19 97.1 78 59.0
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 6.8e-19 97.1 77 57.1
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 8.9e-19 96.7 79 58.2
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 8.9e-19 96.7 78 53.8
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 1.2e-18 96.3 68 64.7
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 1.2e-18 96.3 74 56.8
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 1.5e-18 95.9 78 57.7
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 1.5e-18 95.9 78 55.1
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 1.5e-18 95.9 74 59.5
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 2.0e-18 95.5 81 60.5
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 2.0e-18 95.5 75 61.3
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 2.0e-18 95.5 72 62.5
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 2.0e-18 95.5 78 53.8
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 2.6e-18 95.1 78 57.7
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 2.6e-18 95.1 78 56.4
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 4.4e-18 94.4 78 52.6
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 4.4e-18 94.4 78 52.6
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 7.5e-18 93.6 78 59.0
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 2.2e-17 92.0 69 59.4
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 2.9e-17 91.7 64 70.3
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 4.9e-17 90.9 64 67.2
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 1.4e-16 89.4 66 65.2
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 1.9e-16 89.0 79 57.0
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 2.4e-16 88.6 71 56.3
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 5.4e-16 87.4 64 62.5
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 7.0e-16 87.0 53 75.5
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 9.2e-16 86.7 85 48.2
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 2.0e-15 85.5 61 65.6
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 3.9e-14 81.3 65 58.5
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 5.0e-14 80.9 50 74.0
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 5.0e-14 80.9 53 75.5
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 8.6e-14 80.1 54 66.7
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 1.9e-13 79.0 80 55.0
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 5.6e-13 77.4 55 69.1
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 5.6e-13 77.4 65 55.4
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 4.7e-12 74.3 61 57.4
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 6.2e-12 73.9 48 70.8
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 8.1e-12 73.6 54 61.1
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 2.3e-11 72.0 61 54.1
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 5.8e-10 67.4 49 57.1
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 2.2e-09 65.5 55 54.5
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 4.1e-08 61.2 64 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 1.2e-07 59.7 48 52.1


User provided reference genes

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