Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 1.9e-48 195.7 107 100.0
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 2.1e-47 192.2 107 97.2
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 6.6e-46 187.2 107 95.3
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 3.3e-45 184.9 107 94.4
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 6.2e-44 180.6 107 92.5
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 6.2e-44 180.6 107 92.5
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 6.2e-44 180.6 107 92.5
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 6.2e-44 180.6 107 92.5
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 8.1e-44 180.3 107 92.5
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 1.2e-42 176.4 107 88.8
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 2.0e-42 175.6 107 89.7
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 7.6e-42 173.7 107 89.7
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 7.6e-42 173.7 107 89.7
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 8.4e-41 170.2 107 89.7
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 1.6e-39 166.0 107 87.9
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 3.5e-39 164.9 107 84.1
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 1.4e-35 152.9 99 80.8
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.8e-35 152.5 103 79.6
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 3.1e-35 151.8 105 76.2
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 6.9e-35 150.6 105 76.2
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 6.9e-35 150.6 103 79.6
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 9.0e-35 150.2 104 75.0
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 9.0e-35 150.2 105 76.2
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.5e-34 149.4 105 76.2
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 2.0e-34 149.1 105 75.2
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 2.0e-34 149.1 100 78.0
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 2.6e-34 148.7 103 77.7
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 3.4e-34 148.3 99 78.8
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 5.8e-34 147.5 105 74.3
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 2.2e-33 145.6 103 74.8
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 2.2e-33 145.6 103 75.7
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.2e-33 145.6 97 78.4
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 2.9e-33 145.2 103 75.7
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 4.9e-33 144.4 104 72.1
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 4.9e-33 144.4 100 75.0
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 6.4e-33 144.1 105 73.3
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 1.4e-32 142.9 103 74.8
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 1.4e-32 142.9 99 72.7
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 2.4e-32 142.1 104 72.1
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 3.2e-32 141.7 105 70.5
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 3.2e-32 141.7 101 74.3
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 5.4e-32 141.0 100 74.0
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 5.4e-32 141.0 99 74.7
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 7.1e-32 140.6 99 74.7
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 7.1e-32 140.6 99 74.7
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 1.2e-31 139.8 105 67.6
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.2e-31 139.8 105 70.5
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 1.6e-31 139.4 101 71.3
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 2.1e-31 139.0 102 71.6
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.1e-31 139.0 99 73.7
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 2.7e-31 138.7 102 71.6
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 2.7e-31 138.7 105 68.6
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 2.7e-31 138.7 98 76.5
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 6.0e-31 137.5 98 73.5
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 7.8e-31 137.1 105 67.6
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 1.0e-30 136.7 104 70.2
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.0e-30 136.7 99 72.7
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 1.0e-30 136.7 103 69.9
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 1.0e-30 136.7 99 73.7
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.3e-30 136.3 104 70.2
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 1.7e-30 136.0 100 72.0
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 3.9e-30 134.8 102 67.6
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 5.1e-30 134.4 103 70.9
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 5.1e-30 134.4 99 71.7
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 6.6e-30 134.0 100 70.0
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 1.5e-29 132.9 102 66.7
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 2.5e-29 132.1 102 67.6
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 2.5e-29 132.1 99 72.7
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 4.3e-29 131.3 100 70.0
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 4.3e-29 131.3 105 66.7
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 9.6e-29 130.2 102 69.6
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 9.6e-29 130.2 101 69.3
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 9.6e-29 130.2 101 67.3
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.3e-28 129.8 98 71.4
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 8.1e-28 127.1 101 68.3
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 1.8e-27 125.9 104 67.3
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 1.8e-27 125.9 100 67.0
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 1.8e-27 125.9 101 65.3
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 1.8e-27 125.9 101 65.3
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.8e-27 125.9 108 63.9
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.8e-27 125.9 104 67.3
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 2.4e-27 125.6 101 67.3
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 2.4e-27 125.6 101 64.4
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 4.0e-27 124.8 101 64.4
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 5.3e-27 124.4 116 62.1
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 6.9e-27 124.0 99 65.7
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 6.9e-27 124.0 99 65.7
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 9.0e-27 123.6 101 64.4
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 1.5e-26 122.9 104 65.4
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 2.0e-26 122.5 106 63.2
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 3.4e-26 121.7 106 61.3
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 3.4e-26 121.7 104 61.5
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 9.9e-26 120.2 101 63.4
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 1.3e-25 119.8 101 64.4
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 1.3e-25 119.8 97 64.9
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 1.7e-25 119.4 101 65.3
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 1.7e-25 119.4 101 65.3
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 3.8e-25 118.2 104 62.5
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 1.1e-24 116.7 74 87.8
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 2.4e-24 115.5 102 63.7
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 5.4e-24 114.4 80 78.8
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 2.7e-23 112.1 82 74.4
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.7e-23 112.1 77 77.9
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 6.0e-23 110.9 82 72.0
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 7.9e-23 110.5 99 59.6
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 3.0e-22 108.6 156 46.2
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 3.9e-22 108.2 80 71.2
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 5.1e-22 107.8 79 72.2
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 3.3e-21 105.1 80 70.0
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 7.4e-21 104.0 83 68.7
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.1e-19 100.1 85 65.9
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.1e-19 100.1 82 64.6
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 3.1e-19 98.6 100 56.0
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 1.5e-18 96.3 100 56.0
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 4.5e-18 94.7 91 52.7
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 4.5e-18 94.7 91 53.8
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 7.6e-18 94.0 79 64.6
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 2.2e-17 92.4 76 67.1
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 6.4e-17 90.9 52 88.5
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 6.4e-17 90.9 52 88.5
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 7.1e-16 87.4 78 60.3
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 7.1e-16 87.4 76 59.2
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 2.7e-15 85.5 94 50.0
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 3.4e-10 68.6 54 68.5
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 1.9e-08 62.8 74 47.3
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 6.7e-06 54.3 51 51.0


User provided reference genes

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