Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G45170 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 2.1e-171 605.5 286 100.0
Carub.0005s2910 Capsella rubella HOM05D010079 ORTHO05D011550 7.3e-124 447.6 321 69.8
BcaNung03153 Brassica carinata HOM05D010079 ORTHO05D011550 1.1e-90 337.4 316 56.0
AT3G62380 Arabidopsis thaliana HOM05D010079 ORTHO05D011550 8.4e-88 327.8 328 54.6
AL5G45150 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 1.1e-79 300.8 291 57.7
C04p30670 Brassica napus HOM05D010079 ORTHO05D011550 5.7e-60 235.3 297 47.5
AL2G23450 Arabidopsis lyrata HOM05D026666 ORTHO05D026802 2.2e-48 196.8 339 39.2
Sp7g12250 Schrenkiella parvula HOM05D010079 ORTHO05D011550 2.0e-44 183.7 284 41.5
Thhalv10017914m.g Eutrema salsugineum HOM05D010079 ORTHO05D011550 1.3e-43 181.0 296 39.2
CARHR172720 Cardamine hirsuta HOM05D010079 ORTHO05D011550 2.2e-43 180.3 247 42.9
Thhalv10009972m.g Eutrema salsugineum HOM05D010079 ORTHO05D011550 5.3e-42 175.6 324 37.3
BraA09t40629Z Brassica rapa HOM05D010079 ORTHO05D011550 3.4e-41 172.9 136 60.3
Sp1g33930 Schrenkiella parvula HOM05D010079 ORTHO05D011550 7.2e-39 165.2 301 38.2
SpUn0058_0010 Schrenkiella parvula HOM05D010079 ORTHO05D011550 7.2e-39 165.2 301 38.2
AL5G45090 Arabidopsis lyrata HOM05D001738 ORTHO05D011550 2.4e-34 150.2 282 39.0
Carub.0002s1775 Capsella rubella HOM05D010079 ORTHO05D011550 3.8e-32 142.9 337 31.8
AT1G71320 Arabidopsis thaliana HOM05D010079 ORTHO05D011550 4.7e-30 136.0 361 29.9
AL2G29740 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 6.7e-29 132.1 149 45.0
AL2G30500 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 8.8e-29 131.7 364 30.2
CARHR172670 Cardamine hirsuta HOM05D001738 ORTHO05D011550 1.5e-28 131.0 312 31.7
Carub.0002s1777 Capsella rubella HOM05D010079 ORTHO05D011550 9.7e-28 128.3 189 38.6
Thhalv10009802m.g Eutrema salsugineum HOM05D010079 ORTHO05D011550 3.1e-26 123.2 146 46.6
A09p51960 Brassica napus HOM05D010079 ORTHO05D032171 1.3e-24 117.9 200 39.5
AT3G62350 Arabidopsis thaliana HOM05D010079 ORTHO05D011550 2.9e-24 116.7 153 41.2
CARHR045390 Cardamine hirsuta HOM05D010079 ORTHO05D011550 1.0e-21 108.2 67 74.6
Carub.0005s2907 Capsella rubella HOM05D010079 ORTHO05D011550 3.0e-21 106.7 223 33.2
Sp1g29020 Schrenkiella parvula HOM05D001738 ORTHO05D011550 7.2e-15 85.5 199 30.2
CARHR032950 Cardamine hirsuta HOM05D001738 ORTHO05D011550 1.8e-13 80.9 180 32.2
Sp1g28940 Schrenkiella parvula HOM05D001738 ORTHO05D011550 1.2e-12 78.2 208 29.8
BraA05t21312Z Brassica rapa HOM05D001738 ORTHO05D001644 7.5e-12 75.5 258 27.5
AT1G33530 Arabidopsis thaliana HOM05D001738 ORTHO05D011550 2.2e-11 73.9 264 28.0
Carub.0001s3170 Capsella rubella HOM05D001738 ORTHO05D001644 1.1e-10 71.6 185 30.8
A09p63560 Brassica napus HOM05D001738 ORTHO05D001644 9.2e-10 68.6 246 28.9
BraA09t41707Z Brassica rapa HOM05D001738 ORTHO05D001644 9.2e-10 68.6 246 28.9
BcaC03g13251 Brassica carinata HOM05D001738 ORTHO05D001644 1.2e-09 68.2 185 29.2
BcaC07g41674 Brassica carinata HOM05D001738 ORTHO05D001644 1.2e-09 68.2 198 29.3
AL1G24890 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 2.0e-09 67.4 296 25.7
BolC8t52246H Brassica oleracea HOM05D001738 ORTHO05D001644 2.0e-09 67.4 211 28.0
Aa31LG8G6370 Aethionema arabicum HOM05D001738 ORTHO05D001644 3.5e-09 66.6 267 27.7
BcaB08g34245 Brassica carinata HOM05D001738 ORTHO05D001644 5.9e-09 65.9 211 27.5
AL5G11230 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 7.8e-09 65.5 289 23.5
AL4G41930 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 1.0e-08 65.1 201 27.9
BcaC05g28637 Brassica carinata HOM05D001738 ORTHO05D001644 1.0e-08 65.1 150 30.0
C05p47360 Brassica napus HOM05D001738 ORTHO05D001644 1.0e-08 65.1 194 28.4
C08p47070 Brassica napus HOM05D001738 ORTHO05D001644 1.0e-08 65.1 198 27.8
BolC5t33463H Brassica oleracea HOM05D001738 ORTHO05D001644 1.0e-08 65.1 194 28.4
Gohir.A11G248650 Gossypium hirsutum HOM05D000007 ORTHO05D001644 1.3e-08 64.7 287 23.7
BraA05t21965Z Brassica rapa HOM05D001738 ORTHO05D001644 1.7e-08 64.3 194 28.9
Thhalv10006448m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 2.3e-08 63.9 267 28.5
Carub.0001s1264 Capsella rubella HOM05D001738 ORTHO05D001644 2.9e-08 63.5 221 26.2
Thhalv10005659m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 2.9e-08 63.5 131 30.5
BolC5t33470H Brassica oleracea HOM05D001738 ORTHO05D001644 3.8e-08 63.2 156 28.8
C05p47410 Brassica napus HOM05D001738 ORTHO05D001644 5.0e-08 62.8 131 31.3
C05p07170 Brassica napus HOM05D005941 ORTHO05D007879 8.6e-08 62.0 205 26.8
Carub.0006s1692 Capsella rubella HOM05D001738 ORTHO05D001644 8.6e-08 62.0 199 25.6
A05p31320 Brassica napus HOM05D004345 ORTHO05D005192 1.1e-07 61.6 198 26.3
BraA05t21970Z Brassica rapa HOM05D004345 ORTHO05D005192 1.1e-07 61.6 198 26.3
Carub.0005s2945 Capsella rubella HOM05D005941 ORTHO05D007879 1.1e-07 61.6 204 27.0
CARHR168120 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.5e-07 61.2 201 28.9
BcaB03g13154 Brassica carinata HOM05D001738 ORTHO05D001644 1.9e-07 60.8 223 26.5
A08p32410 Brassica napus HOM05D001738 ORTHO05D001644 2.5e-07 60.5 218 26.6
BraA08t35164Z Brassica rapa HOM05D001738 ORTHO05D001644 2.5e-07 60.5 218 26.6
CARHR224500 Cardamine hirsuta HOM05D005941 ORTHO05D007879 2.5e-07 60.5 200 26.0
BcaB08g34244 Brassica carinata HOM05D001738 ORTHO05D001644 3.3e-07 60.1 194 27.8
Sed0024435 Sechium edule HOM05D000007 ORTHO05D000017 3.3e-07 60.1 220 27.3
AL1G22170 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 4.3e-07 59.7 238 26.5
AL4G36610 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 4.3e-07 59.7 133 33.8
AT2G43260 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 4.3e-07 59.7 201 25.4
BcaC04g21963 Brassica carinata HOM05D001738 ORTHO05D001644 4.3e-07 59.7 213 26.3
Duzib128G1891 Durio zibethinus HOM05D000007 ORTHO05D001644 4.3e-07 59.7 300 25.0
MELO3C009392.2 Cucumis melo HOM05D000007 ORTHO05D000039 5.6e-07 59.3 278 19.4
CSS0029460 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 7.3e-07 58.9 170 28.2
Carub.0001s1261 Capsella rubella HOM05D001738 ORTHO05D001644 9.5e-07 58.5 254 27.6
A09p63210 Brassica napus HOM05D001738 ORTHO05D001644 1.2e-06 58.2 285 26.0
C08p47060 Brassica napus HOM05D001738 ORTHO05D001644 1.2e-06 58.2 106 34.0
BraA09t41673Z Brassica rapa HOM05D001738 ORTHO05D001644 1.2e-06 58.2 285 26.0
PSO210G7490 Papaver somniferum HOM05D000007 ORTHO05D000676 1.2e-06 58.2 112 35.7
PSO832G1314 Papaver somniferum HOM05D000007 ORTHO05D000676 1.2e-06 58.2 213 29.6
CARHR211720 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.6e-06 57.8 217 25.8
CiPaw.07G037900 Carya illinoinensis HOM05D000007 ORTHO05D000017 1.6e-06 57.8 179 29.6
AL1G47910 Arabidopsis lyrata HOM05D001738 ORTHO05D011550 2.1e-06 57.4 239 28.5
AT2G05600 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 2.1e-06 57.4 104 34.6
BcaC07g41659 Brassica carinata HOM05D001738 ORTHO05D001644 2.1e-06 57.4 235 26.0
BolC8t52209H Brassica oleracea HOM05D001738 ORTHO05D001644 2.1e-06 57.4 235 26.0
BcaNung02577 Brassica carinata HOM05D001738 ORTHO05D001644 2.8e-06 57.0 226 25.2
C08p16010 Brassica napus HOM05D001738 ORTHO05D001644 2.8e-06 57.0 226 25.2
Carub.0001s1317 Capsella rubella HOM05D001738 ORTHO05D001644 2.8e-06 57.0 235 24.7
Sp6g09040 Schrenkiella parvula HOM05D001738 ORTHO05D001644 3.6e-06 56.6 278 24.1
BolC2t06345H Brassica oleracea HOM05D001738 ORTHO05D001644 4.7e-06 56.2 170 25.9
Thecc.05G284200 Theobroma cacao HOM05D000007 ORTHO05D001644 4.7e-06 56.2 214 24.3
Ah.14g085690 Amaranthus hybridus HOM05D000007 ORTHO05D000017 6.1e-06 55.8 245 24.1
BcaB03g13155 Brassica carinata HOM05D001738 ORTHO05D001644 6.1e-06 55.8 223 26.0
BcaC05g28622 Brassica carinata HOM05D001738 ORTHO05D001644 6.1e-06 55.8 131 29.8
BcaC05g28626 Brassica carinata HOM05D001738 ORTHO05D001644 6.1e-06 55.8 131 29.8
BcaC05g28635 Brassica carinata HOM05D001738 ORTHO05D001644 6.1e-06 55.8 192 26.6
BolC5t33458H Brassica oleracea HOM05D001738 ORTHO05D001644 6.1e-06 55.8 131 29.8
Carub.0004s2574 Capsella rubella HOM05D005941 ORTHO05D007879 6.1e-06 55.8 200 26.0
MD17G1263300 Malus domestica HOM05D000007 ORTHO05D000521 6.1e-06 55.8 119 31.1
AL5G11320 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 8.0e-06 55.5 97 35.1
EL10Ac2g03744 Beta vulgaris HOM05D000007 ORTHO05D000017 8.0e-06 55.5 224 22.3
C05p47290 Brassica napus HOM05D001738 ORTHO05D001644 8.0e-06 55.5 131 29.8
BolC5t33468H Brassica oleracea HOM05D001738 ORTHO05D001644 8.0e-06 55.5 171 28.1
QL07p003237 Quercus lobata HOM05D000007 ORTHO05D000039 8.0e-06 55.5 125 28.0


User provided reference genes

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