Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 4.5e-110 401.4 215 100.0
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 2.9e-101 372.1 215 93.5
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 1.5e-94 349.7 215 89.8
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 9.4e-92 340.5 216 88.4
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 3.7e-88 328.6 209 87.1
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 2.9e-85 318.9 215 83.7
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 1.5e-73 280.0 215 75.3
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 4.4e-73 278.5 215 75.8
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 4.4e-73 278.5 215 75.8
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 6.5e-69 264.6 209 76.1
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 8.5e-69 264.2 197 76.6
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 2.5e-68 262.7 209 75.6
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 2.5e-68 262.7 209 75.6
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 2.7e-67 259.2 211 75.4
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 2.7e-67 259.2 211 75.4
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 3.6e-67 258.8 215 71.2
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 7.7e-62 241.1 224 63.8
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 8.6e-61 237.7 215 64.7
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 1.5e-60 236.9 217 65.9
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 1.0e-58 230.7 215 66.5
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 2.3e-58 229.6 215 66.0
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 3.0e-58 229.2 217 63.6
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 4.0e-58 228.8 220 62.3
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 5.2e-58 228.4 219 62.6
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 8.9e-58 227.6 215 65.6
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 8.9e-58 227.6 215 63.7
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 2.6e-57 226.1 215 64.2
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 1.3e-56 223.8 216 60.6
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.8e-55 219.9 214 60.3
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 1.8e-55 219.9 218 61.9
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 1.8e-55 219.9 221 60.2
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 4.1e-55 218.8 213 59.6
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 4.1e-55 218.8 219 61.2
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 5.4e-55 218.4 225 60.0
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 1.2e-54 217.2 218 59.6
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 1.6e-54 216.9 221 59.3
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 2.7e-54 216.1 213 61.0
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 2.7e-54 216.1 217 62.7
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 4.6e-54 215.3 225 58.7
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 5.9e-54 214.9 223 58.7
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 7.8e-54 214.5 225 59.1
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 2.3e-53 213.0 217 62.7
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 3.0e-53 212.6 214 59.3
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 3.9e-53 212.2 222 59.0
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 5.0e-53 211.8 228 56.1
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 6.6e-53 211.5 213 61.0
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 8.6e-53 211.1 221 58.8
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 1.5e-52 210.3 129 88.4
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 1.5e-52 210.3 221 57.9
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 2.5e-52 209.5 213 58.7
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 4.3e-52 208.8 214 60.3
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 5.6e-52 208.4 219 58.0
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 7.3e-52 208.0 217 59.4
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 9.5e-52 207.6 216 60.2
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 1.6e-51 206.8 228 54.4
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.8e-51 206.1 214 59.3
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 3.6e-51 205.7 220 56.4
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 3.6e-51 205.7 228 53.9
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 6.2e-51 204.9 219 59.8
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 6.2e-51 204.9 214 59.3
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 8.0e-51 204.5 207 60.4
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 8.0e-51 204.5 214 59.3
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 1.8e-50 203.4 230 57.4
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 3.1e-50 202.6 218 57.8
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 3.1e-50 202.6 214 59.3
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 4.0e-50 202.2 220 59.1
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 6.8e-50 201.4 213 58.7
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 1.5e-49 200.3 217 57.6
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 3.4e-49 199.1 212 58.0
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 7.5e-49 198.0 214 57.5
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 9.8e-49 197.6 216 56.9
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 2.2e-48 196.4 220 57.7
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 4.9e-48 195.3 215 55.8
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 8.3e-48 194.5 209 57.9
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.1e-47 194.1 211 58.3
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.4e-47 193.7 235 54.5
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.9e-47 193.4 213 57.3
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 2.4e-47 193.0 230 56.5
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 3.2e-47 192.6 163 67.5
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 1.6e-46 190.3 213 56.3
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 1.6e-46 190.3 213 56.3
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 7.8e-46 188.0 226 52.7
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 7.8e-46 188.0 215 54.0
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 8.6e-45 184.5 213 54.5
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 8.6e-45 184.5 217 54.4
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 2.5e-44 183.0 213 54.0
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 3.3e-44 182.6 123 78.9
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 1.2e-43 180.6 226 51.3
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 2.8e-43 179.5 211 52.6
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 2.8e-43 179.5 203 55.7
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 3.6e-43 179.1 209 51.2
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 1.4e-42 177.2 222 53.2
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 3.1e-42 176.0 208 55.8
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 4.9e-40 168.7 119 74.8
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 1.6e-38 163.7 91 93.4
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 1.6e-38 163.7 230 50.0
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 7.8e-38 161.4 162 58.6
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 1.0e-37 161.0 88 93.2
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 2.3e-37 159.8 107 75.7
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.3e-36 155.6 149 59.7
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 6.2e-35 151.8 119 71.4
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.5e-30 136.0 204 44.1
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 1.2e-27 127.5 213 45.5
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 4.7e-27 125.6 82 81.7
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 4.9e-24 115.5 147 51.0
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 4.9e-24 115.5 162 50.0
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.4e-23 114.0 223 41.3
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 4.6e-22 109.0 208 39.9
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 7.8e-22 108.2 214 41.6
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.0e-21 107.8 209 41.1
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 6.9e-18 95.1 134 44.8
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 1.1e-15 87.8 217 36.4
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 7.1e-15 85.1 45 93.3
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 1.9e-12 77.0 214 36.0
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 5.6e-12 75.5 53 73.6
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 9.6e-12 74.7 44 79.5
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.8e-11 73.2 147 37.4
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 8.1e-11 71.6 152 38.8
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.1e-07 61.2 163 39.3
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 2.1e-06 57.0 46 60.9


User provided reference genes

Program Settings