Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G43170 Arabidopsis lyrata HOM05D004961 ORTHO05D006258 0.0e+00 1326.2 647 100.0
AT3G60850 Arabidopsis thaliana HOM05D004961 ORTHO05D006258 0.0e+00 1231.5 650 94.2
Carub.0005s2761 Capsella rubella HOM05D004961 ORTHO05D006258 0.0e+00 1157.5 663 86.7
CARHR171240 Cardamine hirsuta HOM05D004961 ORTHO05D006258 0.0e+00 1129.8 652 86.8
Thhalv10005830m.g Eutrema salsugineum HOM05D004961 ORTHO05D006258 0.0e+00 1127.5 652 85.6
Sp5g02400 Schrenkiella parvula HOM05D004961 ORTHO05D006258 0.0e+00 1096.6 651 83.9
Aa31LG10G15080 Aethionema arabicum HOM05D004961 ORTHO05D006258 1.5e-310 1068.9 652 82.1
BcaC07g40605 Brassica carinata HOM05D004961 ORTHO05D006258 1.1e-292 1009.6 655 77.7
C08p35800 Brassica napus HOM05D004961 ORTHO05D006258 1.1e-292 1009.6 655 77.7
BolC8t51170H Brassica oleracea HOM05D004961 ORTHO05D006258 1.1e-292 1009.6 655 77.7
BcaC07g42645 Brassica carinata HOM05D004961 ORTHO05D006258 1.8e-292 1008.8 656 78.0
A09p53100 Brassica napus HOM05D004961 ORTHO05D006258 2.7e-291 1005.0 652 78.1
BraA09t40736Z Brassica rapa HOM05D004961 ORTHO05D006258 1.3e-290 1002.7 652 77.9
Thecc.01G375500 Theobroma cacao HOM05D004961 ORTHO05D006258 8.6e-282 973.4 656 74.7
THA.LOC104802441 Tarenaya hassleriana HOM05D004961 ORTHO05D006258 4.3e-281 971.1 660 76.1
Gorai.007G091500 Gossypium raimondii HOM05D004961 ORTHO05D006258 1.1e-271 939.9 655 72.4
Gohir.D11G085600 Gossypium hirsutum HOM05D004961 ORTHO05D006258 4.0e-271 937.9 655 72.4
Duzib133G1444 Durio zibethinus HOM05D004961 ORTHO05D006258 6.8e-271 937.2 657 71.8
Gohir.A11G081100 Gossypium hirsutum HOM05D004961 ORTHO05D006258 1.5e-270 936.0 655 71.9
COL.COLO4_12554 Corchorus olitorius HOM05D004961 ORTHO05D006258 1.9e-265 919.1 658 71.1
Cfa001712 Carpinus fangiana HOM05D004961 ORTHO05D006258 4.3e-265 917.9 661 71.7
Haze_16810 Corylus avellana HOM05D004961 ORTHO05D006258 6.2e-264 914.1 661 71.3
CiPaw.02G167000 Carya illinoinensis HOM05D004961 ORTHO05D006258 1.8e-263 912.5 659 70.4
Manes.05G044700 Manihot esculenta HOM05D004961 ORTHO05D006258 1.2e-262 909.8 658 70.5
QL08p052244 Quercus lobata HOM05D004961 ORTHO05D006258 2.4e-260 902.1 658 69.9
Gohir.D08G042400 Gossypium hirsutum HOM05D004961 ORTHO05D006258 1.2e-259 899.8 654 70.9
Gorai.004G041000 Gossypium raimondii HOM05D004961 ORTHO05D006258 1.2e-259 899.8 654 70.9
FvH4_7g11970 Fragaria vesca HOM05D004961 ORTHO05D006258 1.0e-258 896.7 659 70.9
Gohir.A08G031300 Gossypium hirsutum HOM05D004961 ORTHO05D006258 2.3e-258 895.6 653 71.4
FAN06G1099 Fragaria x ananassa HOM05D004961 ORTHO05D006258 3.0e-258 895.2 659 70.7
FAN10G1405 Fragaria x ananassa HOM05D004961 ORTHO05D006258 6.6e-258 894.0 659 70.7
CiPaw.01G261500 Carya illinoinensis HOM05D004961 ORTHO05D006258 3.3e-257 891.7 670 69.3
TWI59G0003 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 1.2e-256 889.8 660 68.3
FAN01G0106 Fragaria x ananassa HOM05D004961 ORTHO05D006258 2.1e-256 889.0 658 70.5
FAN06G1287 Fragaria x ananassa HOM05D004961 ORTHO05D006258 3.6e-256 888.3 659 70.4
BcaC08g45088 Brassica carinata HOM05D004961 ORTHO05D006258 4.7e-256 887.9 656 72.3
TWI14G0737 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 4.7e-256 887.9 655 68.4
C06p26950 Brassica napus HOM05D004961 ORTHO05D006258 1.8e-255 885.9 656 72.1
BolC6t37869H Brassica oleracea HOM05D004961 ORTHO05D006258 1.8e-255 885.9 656 72.1
FAN10G1351 Fragaria x ananassa HOM05D004961 ORTHO05D006258 1.8e-255 885.9 659 70.3
CANSAT56G2246 Cannabis sativa HOM05D004961 ORTHO05D006258 5.2e-255 884.4 653 68.8
FAN03G2819 Fragaria x ananassa HOM05D004961 ORTHO05D006258 3.4e-254 881.7 658 69.8
Sabra14G0049800 Salix brachista HOM05D004961 ORTHO05D006258 1.3e-253 879.8 655 69.5
Potri.014G070200 Populus trichocarpa HOM05D004961 ORTHO05D006258 2.7e-251 872.1 658 69.0
Ciclev10019247m.g Citrus clementina HOM05D004961 ORTHO05D006258 7.8e-251 870.5 665 67.4
RcHm_v2.0_Chr1g0350691 Rosa chinensis HOM05D004961 ORTHO05D006258 1.3e-250 869.8 666 68.5
MD07G1123000 Malus domestica HOM05D004961 ORTHO05D006258 3.0e-250 868.6 656 69.4
MELO3C006184.2 Cucumis melo HOM05D004961 ORTHO05D006258 2.5e-249 865.5 654 67.6
CsaV3_3G009640 Cucumis sativus L. HOM05D004961 ORTHO05D006258 2.5e-249 865.5 654 67.6
CSS0024555 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 2.8e-248 862.1 665 66.9
Sed0003746 Sechium edule HOM05D004961 ORTHO05D006258 2.0e-246 855.9 654 67.6
A07p25240 Brassica napus HOM05D004961 ORTHO05D006258 3.4e-246 855.1 661 69.9
PGR031G0429 Punica granatum HOM05D004961 ORTHO05D006258 4.5e-246 854.7 653 66.9
BraA07t30166Z Brassica rapa HOM05D004961 ORTHO05D006258 8.4e-245 850.5 657 69.7
Prupe.2G146400 Prunus persica HOM05D004961 ORTHO05D006258 1.1e-244 850.1 659 68.1
Ca_23848_v3 Cicer arietinum L. HOM05D004961 ORTHO05D006258 4.2e-244 848.2 616 69.5
vmacro13395 Vaccinium macrocarpon HOM05D004961 ORTHO05D006258 1.0e-242 843.6 663 66.4
TPR.G21740 Trifolium pratense HOM05D004961 ORTHO05D006258 2.8e-240 835.5 563 72.3
MD02G1203100 Malus domestica HOM05D004961 ORTHO05D006258 3.7e-240 835.1 665 66.0
Medtr8g036115 Medicago truncatula HOM05D004961 ORTHO05D006258 1.8e-239 832.8 616 68.7
Lalb_Chr13g0291711 Lupinus albus HOM05D004961 ORTHO05D006258 2.6e-238 828.9 632 67.4
Dinv43717 Davidia involucrata HOM05D004961 ORTHO05D006258 4.5e-238 828.2 658 65.8
Atru.chr5.317 Acer truncatum HOM05D004961 ORTHO05D006258 1.3e-237 826.6 559 73.5
TAR629G2710 Trochodendron aralioides HOM05D004961 ORTHO05D006258 2.4e-236 822.4 662 65.1
Rhsim07G0027200 Rhododendron simsii HOM05D004961 ORTHO05D006258 9.3e-236 820.5 613 67.5
Hma1.2p1_0033F.1_g021010 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 8.7e-234 813.9 667 64.2
Hma1.2p1_2294F.1_g319110 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 1.5e-233 813.1 667 64.2
SalBow5G3969 Salvia bowleyana HOM05D004961 ORTHO05D006258 5.6e-233 811.2 666 63.7
SalBow5G5559 Salvia bowleyana HOM05D004961 ORTHO05D006258 5.6e-233 811.2 666 63.7
Actinidia12261 Actinidia chinensis HOM05D004961 ORTHO05D006258 1.1e-231 807.0 641 66.6
Nn4g26417 Nelumbo nucifera HOM05D004961 ORTHO05D006258 1.1e-231 807.0 555 71.9
arahy.Tifrunner.gnm1.ann1.T4E2VP Arachis hypogaea HOM05D004961 ORTHO05D006258 2.0e-230 802.7 578 70.4
CSS0035955 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 2.6e-230 802.4 676 62.4
Sed0025415 Sechium edule HOM05D004961 ORTHO05D006258 5.8e-230 801.2 614 67.1
arahy.Tifrunner.gnm1.ann1.0VBM10 Arachis hypogaea HOM05D004961 ORTHO05D006258 1.0e-229 800.4 669 64.1
Lj9P570T30 Lonicera japonica HOM05D004961 ORTHO05D006258 3.5e-227 792.0 532 73.3
PSO478G4809 Papaver somniferum HOM05D004961 ORTHO05D006258 3.5e-227 792.0 576 67.9
Psat4g195520 Pisum sativum HOM05D004961 ORTHO05D006258 6.0e-227 791.2 541 71.7
Nitab4.5_0000457g0390 Nicotiana tabacum HOM05D004961 ORTHO05D006258 7.9e-227 790.8 681 62.8
Aqoxy7G00605 Aquilegia oxysepala HOM05D004961 ORTHO05D006258 1.0e-226 790.4 557 69.7
Lj3g0023798 Lotus japonicus HOM05D004961 ORTHO05D006258 6.7e-226 787.7 638 65.2
Phvul.010G084800 Phaseolus vulgaris HOM05D004961 ORTHO05D006258 8.7e-226 787.3 565 70.3
TAR375G0417 Trochodendron aralioides HOM05D004961 ORTHO05D006258 1.6e-224 783.1 555 70.1
Cc02_g36640 Coffea canephora HOM05D004961 ORTHO05D006258 3.7e-224 781.9 697 59.8
PSO782G4206 Papaver somniferum HOM05D004961 ORTHO05D006258 6.3e-224 781.2 576 67.5
Nitab4.5_0005372g0040 Nicotiana tabacum HOM05D004961 ORTHO05D006258 1.8e-223 779.6 680 62.1
VMungo0331G0268 Vigna mungo HOM05D004961 ORTHO05D006258 9.0e-223 777.3 565 69.2
MBI12_g27776_MAGBIO Magnolia biondii HOM05D004961 ORTHO05D006258 2.9e-221 772.3 618 63.6
Glyma.01G143700 Glycine max HOM05D004961 ORTHO05D006258 1.4e-220 770.0 576 67.9
Lalb_Chr07g0189751 Lupinus albus HOM05D004961 ORTHO05D006258 2.5e-220 769.2 617 65.2
Glyma.03G023401 Glycine max HOM05D004961 ORTHO05D006258 7.2e-220 767.7 618 65.4
EL10Ac1g00903 Beta vulgaris HOM05D004961 ORTHO05D006258 9.7e-217 757.3 624 63.0
SHI25769 Sapria himalayana HOM05D004961 ORTHO05D006258 9.7e-217 757.3 634 60.9
AUR62004223 Chenopodium quinoa HOM05D004961 ORTHO05D006258 1.4e-215 753.4 635 63.0
PGSC0003DMG400012758 Solanum tuberosum HOM05D004961 ORTHO05D006258 3.1e-215 752.3 676 59.8
Ah.05g174990 Amaranthus hybridus HOM05D004961 ORTHO05D006258 7.7e-214 747.7 661 60.1
Migut.B01640 Erythranthe guttata HOM05D004961 ORTHO05D006258 2.2e-213 746.1 671 59.6
Sopen01g037160 Solanum pennellii HOM05D004961 ORTHO05D006258 1.4e-212 743.4 552 67.9
Solyc01g091390.2 Solanum lycopersicum HOM05D004961 ORTHO05D006258 1.9e-212 743.0 552 68.1
CAN.G388.8 Capsicum annuum HOM05D004961 ORTHO05D006258 4.2e-212 741.9 681 59.5
Peaxi162Scf00021g01613 Petunia axillaris HOM05D004961 ORTHO05D006258 6.1e-211 738.0 618 63.8
DCAR_025114 Daucus carota HOM05D004961 ORTHO05D006258 3.7e-208 728.8 613 61.3
Nn4g26286 Nelumbo nucifera HOM05D004961 ORTHO05D006258 6.3e-208 728.0 518 70.5
Migut.N01639 Erythranthe guttata HOM05D004961 ORTHO05D006258 7.7e-206 721.1 672 58.2
ECA236G4958 Erigeron canadensis HOM05D004961 ORTHO05D006258 1.0e-205 720.7 665 58.9
Sc26g0001210 Simmondsia chinensis HOM05D004961 ORTHO05D006258 1.4e-204 716.8 564 64.7
ATR0810G227 Amborella trichopoda HOM05D004961 ORTHO05D006258 7.2e-204 714.5 618 59.9
AUR62013625 Chenopodium quinoa HOM05D004961 ORTHO05D006258 6.7e-202 708.0 533 67.9
SGA_v2.0_scaffold11G05589 Striga asiatica HOM05D004961 ORTHO05D006258 1.2e-198 697.2 670 56.7
ECA234G3702 Erigeron canadensis HOM05D004961 ORTHO05D006258 2.0e-198 696.4 663 57.6
Lsat_1_v5_gn_7_7241 Lactuca sativa HOM05D004961 ORTHO05D006258 2.6e-198 696.0 657 61.8
HanXRQChr03g0093851 Helianthus annuus HOM05D004961 ORTHO05D006258 8.8e-194 681.0 655 57.4
HanXRQChr06g0169541 Helianthus annuus HOM05D004961 ORTHO05D006258 1.6e-190 670.2 534 65.9
HanXRQChr09g0245711 Helianthus annuus HOM05D004961 ORTHO05D006258 1.7e-189 666.8 609 59.9
CDE02G2832 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 2.1e-187 659.8 614 59.3
Oeu005782.1 Olea europaea HOM05D004961 ORTHO05D006258 3.6e-187 659.1 662 55.4
Oeu037913.2 Olea europaea HOM05D004961 ORTHO05D006258 2.7e-182 642.9 660 55.6
HPP92_025672 Vanilla planifolia HOM05D004961 ORTHO05D006258 3.0e-178 629.4 687 52.8
SEGI_19190 Sequoiadendron giganteum HOM05D004961 ORTHO05D006258 1.1e-175 620.9 636 54.9
HanXRQChr16g0519241 Helianthus annuus HOM05D004961 ORTHO05D006258 8.3e-168 594.7 660 54.4
Oeu003482.1 Olea europaea HOM05D004961 ORTHO05D006258 3.5e-166 589.3 673 50.7
GSVIVG01027619001 Vitis vinifera HOM05D004961 ORTHO05D006258 1.8e-162 577.0 504 61.9
CDE11G0257 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 2.6e-161 573.2 494 61.5
Os03g0247100 Oryza sativa ssp. japonica HOM05D004961 ORTHO05D006258 3.4e-161 572.8 649 51.5
unitig_8.g3388 Utricularia gibba HOM05D004961 ORTHO05D006258 5.2e-154 548.9 432 63.9
Zm00001eb398630 Zea mays HOM05D004961 ORTHO05D006258 1.5e-148 530.8 586 52.4
unitig_22.g6802 Utricularia gibba HOM05D004961 ORTHO05D006258 7.1e-143 511.9 421 65.1
ATR0582G166 Amborella trichopoda HOM05D004961 ORTHO05D006258 3.5e-142 509.6 573 48.7
Eucgr.D02450 Eucalyptus grandis HOM05D004961 ORTHO05D006258 3.4e-129 466.5 342 68.7
SMO164G0066 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 1.4e-122 444.5 383 56.4
SMO358G0144 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 2.0e-121 440.7 408 55.9
BcaB02g07397 Brassica carinata HOM05D004961 ORTHO05D006258 7.9e-110 402.1 353 62.6
Nn1g01213 Nelumbo nucifera HOM05D004961 ORTHO05D006258 1.2e-102 378.3 295 63.4
BcaC07g40606 Brassica carinata HOM05D003135 ORTHO05D003715 3.5e-89 333.6 401 49.4
Cpa.g.sc18.116 Carica papaya HOM05D004961 ORTHO05D006258 4.5e-81 306.6 651 35.0
SGA_v2.0_scaffold43G16471 Striga asiatica HOM05D004961 ORTHO05D006258 6.3e-67 259.6 622 31.8
BcaC07g40608 Brassica carinata HOM05D003135 ORTHO05D006258 1.9e-63 248.1 166 78.3
unitig_22.g6801 Utricularia gibba HOM05D004961 ORTHO05D006258 8.9e-45 186.0 219 47.0
BcaNung07135 Brassica carinata HOM05D004961 ORTHO05D006258 7.1e-42 176.4 194 54.6
Zm00001eb010600 Zea mays HOM05D004961 ORTHO05D006258 2.3e-40 171.4 192 49.5
BcaNung07139 Brassica carinata HOM05D004961 ORTHO05D006258 1.0e-32 146.0 101 75.2
SMO115G0102 Selaginella moellendorffii HOM05D004961 ORTHO05D037335 3.6e-30 137.5 296 31.4
BcaNung07137 Brassica carinata HOM05D004961 ORTHO05D006258 1.1e-26 125.9 77 79.2
HanXRQChr16g0519231 Helianthus annuus HOM05D004961 ORTHO05D006258 1.7e-24 118.6 101 59.4
MELO3C015747.2 Cucumis melo HOM05D004961 ORTHO05D044953 2.4e-21 108.2 134 48.5
AagrBONN_evm.TU.Sc2ySwM_344.1101 Anthoceros agrestis HOM05D004961 ORTHO05D006258 3.2e-18 97.8 182 33.0
unitig_8.g3389 Utricularia gibba HOM05D004961 ORTHO05D006258 2.4e-10 71.6 153 38.6
HanXRQChr12g0366651 Helianthus annuus HOM05D001845 ORTHO05D001878 5.1e-08 63.9 57 59.6
BcaC07g40607 Brassica carinata HOM05D003135 ORTHO05D023343 1.5e-07 62.4 40 80.0
Actinidia31413 Actinidia chinensis HOM05D004961 ORTHO05D006258 2.8e-06 58.2 68 44.1


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