Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 1.4e-132 476.5 267 100.0
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 8.3e-122 440.7 268 93.3
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 7.5e-115 417.5 268 88.8
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 1.3e-106 390.2 268 84.3
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 2.3e-103 379.4 269 76.2
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 2.5e-102 375.9 270 80.4
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 3.4e-99 365.5 269 79.6
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 1.7e-98 363.2 269 78.8
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 2.2e-98 362.8 268 79.1
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 2.9e-98 362.5 268 75.7
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 2.9e-98 362.5 268 79.9
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 3.7e-98 362.1 269 78.8
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 1.3e-95 353.6 269 74.7
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 3.3e-94 349.0 269 78.1
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 3.3e-94 349.0 269 78.1
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 3.3e-94 349.0 269 78.1
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 2.1e-93 346.3 269 75.1
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 1.8e-92 343.2 267 71.5
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 5.8e-83 311.6 270 70.0
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 2.8e-77 292.7 279 63.4
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 2.4e-76 289.7 270 66.3
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 6.0e-64 248.4 196 65.8
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.3e-63 247.3 189 66.1
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.3e-63 247.3 189 66.1
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 2.3e-63 246.5 193 63.2
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 5.1e-63 245.4 196 65.3
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.9e-62 243.4 189 65.1
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 1.9e-62 243.4 192 63.5
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 2.5e-62 243.0 189 66.1
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 4.3e-62 242.3 188 63.3
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 7.4e-62 241.5 190 62.6
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 2.1e-61 240.0 198 62.1
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 2.8e-61 239.6 186 65.1
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 4.8e-61 238.8 188 63.8
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 4.8e-61 238.8 186 64.0
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 1.4e-60 237.3 269 50.2
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 3.1e-60 236.1 236 53.0
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 4.0e-60 235.7 191 61.3
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 5.3e-60 235.3 262 55.0
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 9.0e-60 234.6 186 61.8
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 2.0e-59 233.4 205 58.0
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 2.6e-59 233.0 276 56.9
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 3.4e-59 232.6 200 59.5
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 4.5e-59 232.3 197 61.4
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 4.5e-59 232.3 192 60.4
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 5.8e-59 231.9 272 49.3
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.0e-58 231.1 155 71.0
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 1.0e-58 231.1 193 62.7
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 1.0e-58 231.1 193 62.7
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 1.3e-58 230.7 186 61.8
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 1.3e-58 230.7 197 60.4
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 1.7e-58 230.3 168 67.3
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 1.7e-58 230.3 195 59.5
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 1.7e-58 230.3 253 53.4
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 2.2e-58 229.9 154 72.1
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 2.9e-58 229.6 190 61.6
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.9e-58 229.6 204 59.3
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 2.9e-58 229.6 152 73.0
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 2.9e-58 229.6 268 50.0
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 3.8e-58 229.2 153 71.2
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 6.5e-58 228.4 274 48.5
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 6.5e-58 228.4 193 61.7
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 8.4e-58 228.0 274 52.6
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 1.1e-57 227.6 240 59.2
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 1.4e-57 227.3 201 61.7
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 1.4e-57 227.3 184 60.3
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 1.4e-57 227.3 241 51.5
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 1.9e-57 226.9 197 57.9
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 2.5e-57 226.5 186 61.3
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 2.5e-57 226.5 266 50.0
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 3.2e-57 226.1 256 57.4
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 4.2e-57 225.7 257 50.2
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 4.2e-57 225.7 162 66.7
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 4.2e-57 225.7 152 71.7
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 5.5e-57 225.3 199 57.8
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 5.5e-57 225.3 154 70.8
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 9.3e-57 224.6 270 52.2
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 9.3e-57 224.6 194 59.3
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 1.6e-56 223.8 186 59.7
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.6e-56 223.8 150 70.0
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.6e-56 223.8 150 70.0
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 2.7e-56 223.0 253 53.4
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 3.5e-56 222.6 150 70.0
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 4.6e-56 222.2 196 57.7
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 6.0e-56 221.9 191 60.2
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 7.9e-56 221.5 269 56.1
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 1.0e-55 221.1 187 59.9
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 1.0e-55 221.1 189 59.3
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 1.3e-55 220.7 196 57.1
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 1.8e-55 220.3 282 48.9
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 2.3e-55 219.9 146 72.6
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 5.1e-55 218.8 200 55.5
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 5.1e-55 218.8 194 57.2
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 8.7e-55 218.0 191 56.5
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 1.1e-54 217.6 190 59.5
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.5e-54 217.2 207 57.5
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 2.5e-54 216.5 201 56.2
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 2.5e-54 216.5 194 56.2
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 3.3e-54 216.1 186 59.7
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 4.3e-54 215.7 162 65.4
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 4.3e-54 215.7 278 48.6
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 1.3e-53 214.2 264 49.6
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 2.8e-53 213.0 196 56.1
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 1.4e-49 200.7 202 53.5
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 3.2e-49 199.5 178 58.4
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 3.0e-47 193.0 224 51.8
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 3.9e-47 192.6 200 51.5
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 7.4e-46 188.3 158 59.5
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 2.5e-41 173.3 147 57.8
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 2.5e-38 163.3 200 47.0
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 7.4e-38 161.8 189 50.8
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 9.7e-38 161.4 164 50.0
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 2.8e-37 159.8 157 51.0
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 2.8e-37 159.8 165 50.9
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 4.8e-37 159.1 160 49.4
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 1.4e-36 157.5 137 54.0
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 3.1e-36 156.4 159 49.7
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 1.2e-35 154.5 170 45.9
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 1.4e-33 147.5 174 43.7
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 3.3e-30 136.3 162 42.0
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 5.5e-25 119.0 113 54.9
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 7.0e-20 102.1 109 50.5


User provided reference genes

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