Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 1.6e-160 569.3 273 100.0
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 1.1e-153 546.6 274 95.6
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 7.8e-152 540.4 270 94.4
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 9.6e-150 533.5 274 92.3
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 9.6e-150 533.5 273 92.3
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 1.6e-149 532.7 273 91.9
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 4.9e-146 521.2 273 89.4
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 2.4e-145 518.8 273 89.0
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 2.4e-145 518.8 273 89.4
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 1.6e-144 516.2 273 89.0
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 1.4e-137 493.0 273 83.2
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 3.2e-137 491.9 273 83.9
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 5.1e-127 458.0 256 85.9
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 1.5e-126 456.4 256 86.3
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 1.8e-119 433.0 273 72.9
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 9.7e-118 427.2 273 72.9
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 1.3e-117 426.8 273 72.5
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 3.1e-116 422.2 273 70.7
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 3.4e-115 418.7 267 71.5
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 1.7e-114 416.4 273 70.7
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 6.5e-114 414.5 273 70.3
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 6.5e-114 414.5 273 69.6
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 1.4e-113 413.3 264 73.5
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.2e-113 412.1 245 74.7
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 3.2e-113 412.1 273 68.5
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 4.2e-113 411.8 266 71.1
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 7.2e-113 411.0 275 68.7
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 7.2e-113 411.0 275 68.7
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 9.4e-113 410.6 273 68.9
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.2e-112 410.2 275 69.1
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 2.1e-112 409.5 270 69.3
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 2.7e-112 409.1 275 69.1
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 4.7e-112 408.3 267 70.8
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 1.5e-110 403.3 261 70.1
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 7.4e-110 401.0 250 71.2
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.2e-109 399.4 250 69.6
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.2e-109 399.4 250 69.6
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 2.8e-109 399.1 270 68.1
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 2.8e-109 399.1 264 69.7
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 2.8e-109 399.1 266 71.1
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 3.7e-109 398.7 256 69.5
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 6.3e-109 397.9 256 69.5
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 2.4e-108 396.0 262 69.5
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 4.1e-108 395.2 256 70.7
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 1.2e-107 393.7 274 68.6
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 7.7e-107 391.0 267 68.9
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 7.7e-107 391.0 274 66.4
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 8.5e-106 387.5 272 66.9
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 1.1e-105 387.1 273 65.9
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 1.4e-105 386.7 267 66.7
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 1.9e-105 386.3 270 66.3
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 3.2e-105 385.6 270 66.3
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 5.5e-105 384.8 264 67.4
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 1.6e-104 383.3 265 65.7
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 2.7e-104 382.5 263 66.9
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 2.7e-104 382.5 265 65.3
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 3.6e-104 382.1 270 64.8
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 6.1e-104 381.3 268 66.0
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 1.0e-103 380.6 273 62.3
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 2.3e-103 379.4 249 70.7
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 2.3e-103 379.4 249 70.3
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 3.0e-103 379.0 246 69.5
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 8.8e-103 377.5 254 68.1
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 1.5e-102 376.7 274 63.5
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 9.7e-102 374.0 248 68.1
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 9.7e-102 374.0 285 62.1
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 3.7e-101 372.1 250 65.6
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 8.2e-101 370.9 291 61.2
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 1.7e-98 363.2 254 66.5
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 1.1e-97 360.5 269 62.5
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 2.7e-96 355.9 252 66.3
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 8.8e-95 350.9 254 64.2
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 4.4e-94 348.6 244 66.8
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 5.7e-94 348.2 248 65.7
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 3.7e-93 345.5 222 71.2
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 3.1e-92 342.4 269 59.9
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 1.8e-87 326.6 291 57.0
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 2.6e-86 322.8 246 62.2
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 4.4e-86 322.0 247 61.5
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 8.3e-85 317.8 236 61.4
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 1.7e-82 310.1 235 61.7
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 1.7e-82 310.1 234 62.0
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 9.5e-81 304.3 194 71.6
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 2.3e-79 299.7 235 59.1
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 1.2e-75 287.3 236 56.4
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 1.0e-74 284.3 175 72.6
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 1.5e-73 280.4 277 53.8
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 9.5e-73 277.7 192 65.6
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 8.9e-71 271.2 237 49.4
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.2e-69 266.5 183 66.1
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 4.9e-69 265.4 237 49.4
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 5.0e-66 255.4 185 65.9
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 1.1e-65 254.2 163 72.4
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 1.1e-57 227.6 136 72.1
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 5.8e-54 215.3 144 70.1
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 1.6e-51 207.2 170 56.5
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 3.9e-50 202.6 158 58.9
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.4e-47 193.4 129 64.3
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 4.0e-47 192.6 144 62.5
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 5.2e-47 192.2 131 68.7
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 5.2e-47 192.2 131 68.7
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 8.4e-45 184.9 136 64.7
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 3.0e-42 176.4 111 71.2
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 8.4e-37 158.3 144 54.9
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 3.0e-34 149.8 103 64.1
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 2.8e-32 143.3 236 33.5
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 6.4e-29 132.1 250 36.8
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 9.6e-25 118.2 111 52.3
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 4.8e-24 115.9 172 39.5
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 1.1e-23 114.8 95 56.8
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 1.2e-22 111.3 62 79.0
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 2.7e-19 100.1 68 70.6
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.6e-16 90.9 44 88.6
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.6e-16 90.9 44 88.6
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 4.8e-16 89.4 60 71.7
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 1.1e-15 88.2 59 71.2
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 1.8e-15 87.4 53 77.4
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 6.5e-13 79.0 161 28.6
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 9.3e-12 75.1 38 86.8
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 1.6e-11 74.3 58 58.6
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 5.1e-10 69.3 43 76.7
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.6e-08 64.3 38 76.3
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.6e-08 64.3 38 76.3
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.4e-07 60.5 74 44.6
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.2e-06 58.2 87 37.9


User provided reference genes

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