Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G40230 Arabidopsis lyrata HOM05D005267 ORTHO05D006303 6.9e-139 497.3 249 100.0
AT3G58470 Arabidopsis thaliana HOM05D005267 ORTHO05D006303 2.2e-129 465.7 249 93.6
Thhalv10006199m.g Eutrema salsugineum HOM05D005267 ORTHO05D006303 2.6e-125 452.2 249 91.2
CARHR168860 Cardamine hirsuta HOM05D005267 ORTHO05D006303 9.7e-125 450.3 249 90.0
Carub.0005s2521 Capsella rubella HOM05D005267 ORTHO05D006303 3.1e-123 445.3 249 90.0
Sp5g04410 Schrenkiella parvula HOM05D005267 ORTHO05D006303 4.1e-123 444.9 249 89.2
BcaC07g40203 Brassica carinata HOM05D005267 ORTHO05D006303 9.1e-115 417.2 250 84.0
BraA09t40549Z Brassica rapa HOM05D005267 ORTHO05D006303 3.5e-114 415.2 246 84.1
BcaC07g40256 Brassica carinata HOM05D005267 ORTHO05D006303 7.2e-112 407.5 239 84.5
Aa31LG10G13030 Aethionema arabicum HOM05D006729 ORTHO05D008502 3.4e-109 398.7 233 86.7
C08p33850 Brassica napus HOM05D006729 ORTHO05D008502 1.1e-107 393.7 232 84.9
BolC8t50983H Brassica oleracea HOM05D006729 ORTHO05D008502 1.1e-107 393.7 232 84.9
A09p51030 Brassica napus HOM05D006729 ORTHO05D008502 7.8e-106 387.5 232 84.1
THA.LOC104821240 Tarenaya hassleriana HOM05D005267 ORTHO05D006303 1.1e-99 367.1 239 77.0
Atru.chr8.1242 Acer truncatum HOM05D005267 ORTHO05D006303 1.0e-81 307.4 240 66.2
PGR142G1416 Punica granatum HOM05D005267 ORTHO05D006303 1.0e-81 307.4 231 67.1
Thecc.05G181400 Theobroma cacao HOM05D005267 ORTHO05D006303 1.0e-81 307.4 230 66.1
Duzib128G1921 Durio zibethinus HOM05D005267 ORTHO05D006303 1.7e-81 306.6 228 67.1
COL.COLO4_29458 Corchorus olitorius HOM05D005267 ORTHO05D006303 2.3e-81 306.2 230 65.7
Nitab4.5_0008653g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 6.6e-81 304.7 237 64.6
Ciclev10012610m.g Citrus clementina HOM05D005267 ORTHO05D006303 8.6e-81 304.3 247 63.2
Cpa.g.sc85.6 Carica papaya HOM05D005267 ORTHO05D006303 4.3e-80 302.0 225 65.8
Nitab4.5_0006454g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 9.5e-80 300.8 223 67.3
Psat6g110480 Pisum sativum HOM05D005267 ORTHO05D006303 1.2e-79 300.4 247 62.3
Medtr1g054315 Medicago truncatula HOM05D005267 ORTHO05D006303 3.6e-79 298.9 224 66.1
CANSAT64G2985 Cannabis sativa HOM05D005267 ORTHO05D006303 1.4e-78 297.0 255 60.0
Ca_18103_v3 Cicer arietinum L. HOM05D005267 ORTHO05D006303 1.4e-78 297.0 247 61.9
TWI77G0597 Tripterygium wilfordii HOM05D005267 ORTHO05D006303 1.4e-78 297.0 225 63.6
Haze_20086 Corylus avellana HOM05D005267 ORTHO05D006303 4.0e-78 295.4 222 64.9
MELO3C024594.2 Cucumis melo HOM05D005267 ORTHO05D006303 4.0e-78 295.4 226 64.2
Lj5g0006264 Lotus japonicus HOM05D005267 ORTHO05D006303 8.9e-78 294.3 250 60.0
Cc06_g07120 Coffea canephora HOM05D005267 ORTHO05D006303 1.2e-77 293.9 233 62.7
TPR.G30771 Trifolium pratense HOM05D005267 ORTHO05D006303 1.2e-77 293.9 235 63.0
Cfa020104 Carpinus fangiana HOM05D005267 ORTHO05D006303 2.0e-77 293.1 250 58.0
CsaV3_6G041190 Cucumis sativus L. HOM05D005267 ORTHO05D006303 2.0e-77 293.1 246 60.6
BcaC07g40255 Brassica carinata HOM05D005267 ORTHO05D006303 4.4e-77 292.0 204 75.5
ClCG01G015080 Citrullus lanatus HOM05D005267 ORTHO05D006303 4.4e-77 292.0 226 64.2
Rhsim03G0057300 Rhododendron simsii HOM05D005267 ORTHO05D006303 1.7e-76 290.0 226 62.8
Lalb_Chr21g0316191 Lupinus albus HOM05D005267 ORTHO05D006303 2.2e-76 289.7 248 58.9
Sopen10g032100 Solanum pennellii HOM05D005267 ORTHO05D006303 2.2e-76 289.7 223 65.5
Actinidia37788 Actinidia chinensis HOM05D005267 ORTHO05D006303 2.9e-76 289.3 225 62.7
Lalb_Chr02g0153991 Lupinus albus HOM05D005267 ORTHO05D006303 2.9e-76 289.3 221 65.6
QL07p025833 Quercus lobata HOM05D005267 ORTHO05D006303 3.8e-76 288.9 250 60.4
Solyc10g081590.2 Solanum lycopersicum HOM05D005267 ORTHO05D006303 3.8e-76 288.9 223 65.5
Oeu063094.3 Olea europaea HOM05D005267 ORTHO05D006303 4.9e-76 288.5 219 63.9
PGSC0003DMG400028129 Solanum tuberosum HOM05D005267 ORTHO05D006303 4.9e-76 288.5 223 65.5
Glyma.09G103300 Glycine max HOM05D005267 ORTHO05D006303 1.4e-75 287.0 246 60.6
Glyma.02G167800 Glycine max HOM05D005267 ORTHO05D006303 1.9e-75 286.6 246 60.2
arahy.Tifrunner.gnm1.ann1.3RXG3F Arachis hypogaea HOM05D005267 ORTHO05D006303 2.4e-75 286.2 223 62.8
Eucgr.A02521 Eucalyptus grandis HOM05D005267 ORTHO05D006303 2.4e-75 286.2 227 64.3
arahy.Tifrunner.gnm1.ann1.H25EQ1 Arachis hypogaea HOM05D005267 ORTHO05D006303 3.2e-75 285.8 223 62.3
MBI05_g37655_MAGBIO Magnolia biondii HOM05D005267 ORTHO05D006303 5.4e-75 285.0 224 63.4
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 7.1e-75 284.6 215 64.7
GSVIVG01022470001 Vitis vinifera HOM05D005267 ORTHO05D006303 1.2e-74 283.9 213 64.3
Nn6g32442 Nelumbo nucifera HOM05D005267 ORTHO05D006303 2.7e-74 282.7 226 63.7
Eucgr.A02526 Eucalyptus grandis HOM05D005267 ORTHO05D006303 3.5e-74 282.3 220 65.0
Lsat_1_v5_gn_1_56341 Lactuca sativa HOM05D005267 ORTHO05D006303 3.5e-74 282.3 230 63.0
SGA_v2.0_scaffold41G15783 Striga asiatica HOM05D005267 ORTHO05D006303 4.6e-74 282.0 247 59.5
Potri.016G063600 Populus trichocarpa HOM05D005267 ORTHO05D006303 6.0e-74 281.6 216 66.2
Prupe.7G087000 Prunus persica HOM05D005267 ORTHO05D006303 1.0e-73 280.8 256 57.4
Migut.L01860 Erythranthe guttata HOM05D005267 ORTHO05D006303 3.0e-73 279.3 245 57.1
PSO384G1433 Papaver somniferum HOM05D005267 ORTHO05D006303 3.9e-73 278.9 217 64.5
CSS0044429 Camellia sinensis var. sinensis HOM05D005267 ORTHO05D006303 6.6e-73 278.1 227 60.4
FvH4_6g21270 Fragaria vesca HOM05D005267 ORTHO05D006303 6.6e-73 278.1 237 59.9
HanXRQChr01g0026301 Helianthus annuus HOM05D005267 ORTHO05D006303 1.1e-72 277.3 223 63.2
RcHm_v2.0_Chr3g0477741 Rosa chinensis HOM05D005267 ORTHO05D006303 1.1e-72 277.3 221 62.0
RcHm_v2.0_Chr3g0477781 Rosa chinensis HOM05D005267 ORTHO05D006303 1.1e-72 277.3 221 62.0
FAN14G1206 Fragaria x ananassa HOM05D005267 ORTHO05D006303 3.3e-72 275.8 237 59.5
ECA248G0309 Erigeron canadensis HOM05D005267 ORTHO05D006303 4.3e-72 275.4 224 62.5
FAN02G1071 Fragaria x ananassa HOM05D005267 ORTHO05D006303 4.3e-72 275.4 239 58.2
FAN05G1850 Fragaria x ananassa HOM05D005267 ORTHO05D006303 5.6e-72 275.0 239 58.6
CiPaw.10G022300 Carya illinoinensis HOM05D005267 ORTHO05D006303 9.6e-72 274.2 222 60.4
unitig_899.g15196 Utricularia gibba HOM05D005267 ORTHO05D006303 2.1e-71 273.1 231 60.2
TAR623G0682 Trochodendron aralioides HOM05D005267 ORTHO05D006303 4.7e-71 271.9 221 60.6
Sabra16G0066000 Salix brachista HOM05D005267 ORTHO05D006303 6.2e-71 271.6 235 60.4
Sed0012434 Sechium edule HOM05D005267 ORTHO05D006303 1.1e-70 270.8 219 63.0
MD14G1048200 Malus domestica HOM05D005267 ORTHO05D006303 3.1e-70 269.2 230 60.0
Os03g0749900 Oryza sativa ssp. japonica HOM05D005267 ORTHO05D006303 4.0e-70 268.9 228 58.8
Phvul.007G264300 Phaseolus vulgaris HOM05D005267 ORTHO05D006303 2.0e-69 266.5 236 58.1
Zm00001eb057270 Zea mays HOM05D005267 ORTHO05D006303 3.4e-69 265.8 233 58.8
VMungo0720G2658 Vigna mungo HOM05D005267 ORTHO05D006303 4.4e-69 265.4 236 58.1
Aqoxy1G00565 Aquilegia oxysepala HOM05D005267 ORTHO05D006303 5.8e-69 265.0 223 60.1
FAN05G5707 Fragaria x ananassa HOM05D005267 ORTHO05D006303 5.8e-69 265.0 253 54.9
Hund15032 Selenicereus undatus HOM05D005267 ORTHO05D006303 8.4e-68 261.2 231 58.0
EL10Ac5g11779 Beta vulgaris HOM05D005267 ORTHO05D006303 3.2e-67 259.2 227 56.4
AUR62036286 Chenopodium quinoa HOM05D005267 ORTHO05D006303 9.3e-67 257.7 256 53.5
AUR62039735 Chenopodium quinoa HOM05D005267 ORTHO05D006303 1.7e-65 253.4 272 52.9
ATR0697G123 Amborella trichopoda HOM05D006729 ORTHO05D008502 1.1e-64 250.8 219 56.6
Peaxi162Scf00060g01112 Petunia axillaris HOM05D005267 ORTHO05D006303 1.9e-64 250.0 225 58.7
Lj1A1066G52 Lonicera japonica HOM05D005267 ORTHO05D006303 9.6e-64 247.7 225 58.2
Gorai.006G146100 Gossypium raimondii HOM05D005267 ORTHO05D006303 2.1e-63 246.5 247 53.4
CDE05G1441 Ceratophyllum demersum HOM05D005267 ORTHO05D006303 2.8e-63 246.1 221 58.4
Gohir.A09G131300 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.5e-61 240.4 230 53.9
Mapoly0207s0006 Marchantia polymorpha HOM05D005267 ORTHO05D006303 4.3e-56 222.2 248 47.2
Pp3c20_23410 Physcomitrium patens HOM05D005267 ORTHO05D006303 4.3e-56 222.2 234 49.1
Sc01g0005180 Simmondsia chinensis HOM05D005267 ORTHO05D006303 1.5e-53 213.8 199 58.3
Dinv11912 Davidia involucrata HOM05D005267 ORTHO05D006303 4.5e-53 212.2 212 54.7
BolC4t23005H Brassica oleracea HOM05D005267 ORTHO05D006303 3.8e-52 209.1 136 74.3
CAN.G128.157 Capsicum annuum HOM05D005267 ORTHO05D006303 8.7e-49 198.0 129 68.2
Gohir.D09G127600 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.8e-47 193.0 153 61.4
Gohir.D09G127100 Gossypium hirsutum HOM05D005267 ORTHO05D006303 3.7e-47 192.6 154 61.0
vmacro07530 Vaccinium macrocarpon HOM05D005267 ORTHO05D006303 4.8e-47 192.2 123 69.9
Zm00001eb155770 Zea mays HOM05D000737 ORTHO05D006303 6.9e-46 188.3 187 55.1
Hund24299 Selenicereus undatus HOM05D005267 ORTHO05D006303 1.3e-44 184.1 124 66.1
Zm00001eb307210 Zea mays HOM05D005267 ORTHO05D006303 1.7e-44 183.7 194 54.6
Hund24301 Selenicereus undatus HOM05D005267 ORTHO05D006303 2.9e-44 183.0 124 65.3
Rhsim03G0057000 Rhododendron simsii HOM05D005267 ORTHO05D006303 2.5e-43 179.9 150 58.7
C04p14160 Brassica napus HOM05D005267 ORTHO05D006303 4.2e-43 179.1 120 73.3
CBR_g551 Chara braunii HOM05D005267 ORTHO05D006303 2.1e-42 176.8 256 38.7
Manes.08G038900 Manihot esculenta HOM05D005267 ORTHO05D006303 1.3e-41 174.1 172 54.7
SEGI_05913 Sequoiadendron giganteum HOM05D005267 ORTHO05D006303 1.7e-36 157.1 149 55.0
arahy.Tifrunner.gnm1.ann1.TFGA9S Arachis hypogaea HOM05D005267 ORTHO05D006303 3.8e-36 156.0 124 61.3
Zm00001eb020160 Zea mays HOM05D005267 ORTHO05D006303 3.8e-36 156.0 102 69.6
AagrBONN_evm.TU.Sc2ySwM_344.4688 Anthoceros agrestis HOM05D005267 ORTHO05D006303 3.3e-32 142.9 151 49.0
Zm00001eb298070 Zea mays HOM05D005267 ORTHO05D006303 2.2e-31 140.2 141 53.2
BcaB02g08262 Brassica carinata HOM05D005267 ORTHO05D006303 1.2e-29 134.4 103 72.8
A04p02570 Brassica napus HOM05D005267 ORTHO05D006303 1.3e-28 131.0 75 84.0
Gorai.011G111300 Gossypium raimondii HOM05D005267 ORTHO05D006303 3.9e-25 119.4 77 71.4
Gorai.001G205400 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.1e-24 117.9 79 68.4
Gohir.D12G044850 Gossypium hirsutum HOM05D005267 ORTHO05D006303 3.3e-24 116.3 78 70.5
Gorai.013G089700 Gossypium raimondii HOM05D005267 ORTHO05D006303 4.4e-24 115.9 77 68.8
Gohir.D03G023232 Gossypium hirsutum HOM05D005267 ORTHO05D006303 7.4e-24 115.2 79 69.6
Gohir.A01G123000 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.3e-23 114.4 79 68.4
Gohir.A06G056200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.3e-23 114.4 79 68.4
Gohir.D08G106200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.2e-23 113.6 78 69.2
Gohir.D11G259301 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.2e-23 113.6 78 69.2
Zm00001eb334640 Zea mays HOM05D005267 ORTHO05D006303 2.0e-21 107.1 67 70.1
arahy.Tifrunner.gnm1.ann1.74GVQ2 Arachis hypogaea HOM05D005267 ORTHO05D006303 4.2e-19 99.4 68 63.2
Rhsim03G0056100 Rhododendron simsii HOM05D000045 ORTHO05D006303 1.2e-18 97.8 100 54.0
Zm00001eb096050 Zea mays HOM05D005267 ORTHO05D006303 2.1e-18 97.1 129 47.3
MSTRG.10424 Avicennia marina HOM05D005267 ORTHO05D006303 1.1e-16 91.3 109 47.7
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 1.5e-16 90.9 68 63.2
arahy.Tifrunner.gnm1.ann1.HYSL0N Arachis hypogaea HOM05D005267 ORTHO05D006303 8.2e-15 85.1 61 54.1
HPP92_004175 Vanilla planifolia HOM05D002029 ORTHO05D002158 1.1e-14 84.7 96 49.0
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 4.1e-14 82.8 55 63.6
Gohir.D06G067600 Gossypium hirsutum HOM05D003508 ORTHO05D006303 4.1e-14 82.8 79 53.2
Glyma.03G214201 Glycine max HOM05D005267 ORTHO05D006303 9.1e-14 81.6 63 57.1
Cfa022098 Carpinus fangiana HOM05D005267 ORTHO05D125748 2.2e-12 77.0 175 30.9
CBR_g49867 Chara braunii HOM05D000019 ORTHO05D000353 6.5e-12 75.5 166 25.9
Gohir.D06G044601 Gossypium hirsutum HOM05D003508 ORTHO05D006303 8.5e-12 75.1 49 67.3
Gorai.011G067100 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.1e-11 74.7 47 68.1
arahy.Tifrunner.gnm1.ann1.PYJ9JQ Arachis hypogaea HOM05D005267 ORTHO05D006303 5.5e-11 72.4 64 53.1
Pp3c20_11400 Physcomitrium patens HOM05D005267 ORTHO05D006303 3.6e-10 69.7 165 23.0
VMungo0464G2161 Vigna mungo HOM05D005267 ORTHO05D006303 8.0e-10 68.6 56 50.0
Mapoly0004s0240 Marchantia polymorpha HOM05D005267 ORTHO05D006303 1.8e-09 67.4 148 26.4
Cre10.g418700 Chlamydomonas reinhardtii HOM05D005267 ORTHO05D006303 3.0e-09 66.6 114 31.6
MCO14G360 Micromonas commoda HOM05D005267 ORTHO05D006303 8.8e-09 65.1 163 27.6
arahy.Tifrunner.gnm1.ann1.4NE9EM Arachis hypogaea HOM05D005267 ORTHO05D006303 1.3e-07 61.2 36 66.7
FvH4_6g21293 Fragaria vesca HOM05D005267 ORTHO05D006303 4.8e-07 59.3 35 68.6
Pp3c8_10880 Physcomitrium patens HOM05D005267 ORTHO05D006303 1.8e-06 57.4 206 21.8
AagrBONN_evm.TU.Sc2ySwM_362.204 Anthoceros agrestis HOM05D005267 ORTHO05D006303 3.1e-06 56.6 132 25.8


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