Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G39510 Arabidopsis lyrata HOM05D000256 ORTHO05D021431 1.1e-89 333.2 155 100.0
AT3G57840 Arabidopsis thaliana HOM05D000256 ORTHO05D021431 2.1e-56 222.6 156 69.2
AT1G56385 Arabidopsis thaliana HOM05D000256 ORTHO05D021431 5.4e-41 171.4 155 57.4
Carub.0005s2469 Capsella rubella HOM05D000256 ORTHO05D021431 9.3e-41 170.6 158 53.8
Thhalv10006292m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.8e-36 156.4 154 49.4
Carub.0005s2461 Capsella rubella HOM05D000256 ORTHO05D021431 9.9e-35 150.6 160 46.9
CARHR168160 Cardamine hirsuta HOM05D000256 ORTHO05D021431 1.3e-18 97.1 157 40.8
Thhalv10015390m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 2.3e-15 86.3 148 33.8
Aa31LG2G15300 Aethionema arabicum HOM05D000256 ORTHO05D000119 2.5e-14 82.8 118 39.8
AT3G17080 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 2.5e-14 82.8 112 39.3
AT4G16195 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 2.5e-14 82.8 114 36.0
AL7G38890 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 4.3e-14 82.0 115 35.7
BcaB04g18372 Brassica carinata HOM05D000256 ORTHO05D000119 4.3e-14 82.0 126 36.5
BcaB06g25801 Brassica carinata HOM05D000256 ORTHO05D000119 5.7e-14 81.6 115 35.7
Carub.0003s1672 Capsella rubella HOM05D000256 ORTHO05D000119 5.7e-14 81.6 116 32.8
Sp3g15180 Schrenkiella parvula HOM05D000256 ORTHO05D000119 5.7e-14 81.6 116 34.5
Aa31LG10G5940 Aethionema arabicum HOM05D000256 ORTHO05D000119 7.4e-14 81.3 115 33.9
BcaC07g37967 Brassica carinata HOM05D000256 ORTHO05D000119 7.4e-14 81.3 117 35.9
BcaC07g37968 Brassica carinata HOM05D000256 ORTHO05D000119 7.4e-14 81.3 117 35.9
BolC8t48347H Brassica oleracea HOM05D000256 ORTHO05D000119 7.4e-14 81.3 117 35.9
Thhalv10022192m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 9.7e-14 80.9 115 35.7
BraA08t33226Z Brassica rapa HOM05D000256 ORTHO05D000119 1.3e-13 80.5 117 35.9
Thhalv10022389m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 2.8e-13 79.3 115 35.7
Manes.03G153600 Manihot esculenta HOM05D000256 ORTHO05D000119 3.7e-13 79.0 144 30.6
BcaC06g32996 Brassica carinata HOM05D000256 ORTHO05D000119 4.8e-13 78.6 117 33.3
BraA03t09878Z Brassica rapa HOM05D000256 ORTHO05D000119 4.8e-13 78.6 113 35.4
CARHR222580 Cardamine hirsuta HOM05D000256 ORTHO05D000119 6.3e-13 78.2 119 32.8
Thhalv10027197m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.1e-12 77.4 116 36.2
THA.LOC104814028 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 1.1e-12 77.4 115 35.7
A01p37270 Brassica napus HOM05D000256 ORTHO05D000119 1.4e-12 77.0 112 35.7
Aa31LG2G14700 Aethionema arabicum HOM05D000256 ORTHO05D000119 2.4e-12 76.3 159 29.6
Aa31LG2G15310 Aethionema arabicum HOM05D000256 ORTHO05D000119 2.4e-12 76.3 113 37.2
Carub.0006s1058 Capsella rubella HOM05D000256 ORTHO05D000119 3.1e-12 75.9 146 28.8
Manes.03G153351 Manihot esculenta HOM05D000256 ORTHO05D000119 3.1e-12 75.9 110 31.8
BcaC07g37952 Brassica carinata HOM05D000256 ORTHO05D000119 4.1e-12 75.5 115 33.9
BolC8t48334H Brassica oleracea HOM05D000256 ORTHO05D000119 4.1e-12 75.5 115 33.9
CARHR201070 Cardamine hirsuta HOM05D000256 ORTHO05D000119 4.1e-12 75.5 147 30.6
BcaC02g12403 Brassica carinata HOM05D000256 ORTHO05D000119 5.3e-12 75.1 111 34.2
A08p12430 Brassica napus HOM05D000256 ORTHO05D000119 5.3e-12 75.1 115 33.9
A09p43180 Brassica napus HOM05D000256 ORTHO05D000119 5.3e-12 75.1 150 33.3
BraA08t33213Z Brassica rapa HOM05D000256 ORTHO05D000119 5.3e-12 75.1 115 33.9
CARHR092330 Cardamine hirsuta HOM05D000256 ORTHO05D000119 5.3e-12 75.1 112 37.5
Manes.03G153500 Manihot esculenta HOM05D000256 ORTHO05D000119 9.0e-12 74.3 111 30.6
Thhalv10015241m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.2e-11 73.9 148 31.8
Aa31LG10G5930 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.5e-11 73.6 115 31.3
BcaB04g18362 Brassica carinata HOM05D000256 ORTHO05D000119 1.5e-11 73.6 153 28.8
C07p47740 Brassica napus HOM05D000256 ORTHO05D000119 2.0e-11 73.2 117 32.5
BolC7t45299H Brassica oleracea HOM05D000256 ORTHO05D000119 2.6e-11 72.8 117 32.5
Manes.03G154300 Manihot esculenta HOM05D000256 ORTHO05D000119 2.6e-11 72.8 114 29.8
CARHR259490 Cardamine hirsuta HOM05D000256 ORTHO05D000119 3.4e-11 72.4 151 31.1
Ciclev10007065m.g Citrus clementina HOM05D000256 ORTHO05D000119 3.4e-11 72.4 145 31.0
Manes.03G153800 Manihot esculenta HOM05D000256 ORTHO05D000119 3.4e-11 72.4 111 30.6
BcaC06g33456 Brassica carinata HOM05D000256 ORTHO05D000119 4.5e-11 72.0 117 31.6
Thhalv10022076m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 5.9e-11 71.6 111 35.1
Aa31LG2G15350 Aethionema arabicum HOM05D000256 ORTHO05D000119 7.7e-11 71.2 113 33.6
Aa31LG2G15930 Aethionema arabicum HOM05D000256 ORTHO05D000119 7.7e-11 71.2 113 33.6
AT3G16970 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 7.7e-11 71.2 116 30.2
Lalb_Chr15g0076351 Lupinus albus HOM05D000256 ORTHO05D000119 7.7e-11 71.2 150 33.3
A03p05380 Brassica napus HOM05D000256 ORTHO05D000119 1.0e-10 70.9 148 28.4
BraA03t09877Z Brassica rapa HOM05D000256 ORTHO05D000119 1.0e-10 70.9 148 28.4
AL3G29950 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.3e-10 70.5 144 27.1
BcaC05g28829 Brassica carinata HOM05D000256 ORTHO05D000119 1.3e-10 70.5 109 36.7
BolC5t33677H Brassica oleracea HOM05D014510 ORTHO05D000119 1.3e-10 70.5 109 36.7
Aa31LG2G14660 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.7e-10 70.1 140 30.7
A03p49670 Brassica napus HOM05D000256 ORTHO05D000119 1.7e-10 70.1 117 31.6
BraA03t14066Z Brassica rapa HOM05D000256 ORTHO05D000119 1.7e-10 70.1 117 31.6
Duzib268G1414 Durio zibethinus HOM05D000256 ORTHO05D000119 1.7e-10 70.1 150 29.3
Manes.03G153250 Manihot esculenta HOM05D000256 ORTHO05D000119 1.7e-10 70.1 146 27.4
Manes.03G154000 Manihot esculenta HOM05D000256 ORTHO05D000119 1.7e-10 70.1 111 29.7
Ciclev10006406m.g Citrus clementina HOM05D000256 ORTHO05D000119 2.2e-10 69.7 112 32.1
Ciclev10006673m.g Citrus clementina HOM05D000256 ORTHO05D000119 2.2e-10 69.7 112 32.1
Lalb_Chr11g0072401 Lupinus albus HOM05D000256 ORTHO05D000119 2.2e-10 69.7 150 28.7
BNapus_Darmor_BZH_scaffold_38p02240 Brassica napus HOM05D000256 ORTHO05D000119 3.8e-10 68.9 161 32.3
Manes.03G154200 Manihot esculenta HOM05D000256 ORTHO05D000119 3.8e-10 68.9 146 26.7
Phvul.008G063600 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.8e-10 68.9 113 31.9
C03p06210 Brassica napus HOM05D000256 ORTHO05D000119 6.5e-10 68.2 148 28.4
BolC3t13128H Brassica oleracea HOM05D000256 ORTHO05D000119 6.5e-10 68.2 148 28.4
ClCG06G007560 Citrullus lanatus HOM05D000256 ORTHO05D000119 6.5e-10 68.2 145 33.1
COL.COLO4_34098 Corchorus olitorius HOM05D000048 ORTHO05D000207 6.5e-10 68.2 118 33.1
Lalb_Chr11g0072391 Lupinus albus HOM05D000256 ORTHO05D000119 6.5e-10 68.2 150 33.3
BcaC03g13696 Brassica carinata HOM05D000256 ORTHO05D000119 8.5e-10 67.8 76 46.1
Thecc.04G213300 Theobroma cacao HOM05D000256 ORTHO05D000119 8.5e-10 67.8 118 34.7
Lalb_Chr18g0044321 Lupinus albus HOM05D000256 ORTHO05D000119 1.1e-09 67.4 116 32.8
GSVIVG01014872001 Vitis vinifera HOM05D000256 ORTHO05D000119 1.1e-09 67.4 120 30.8
AL6G22850 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.4e-09 67.0 147 29.3
Prupe.1G057200 Prunus persica HOM05D000256 ORTHO05D000119 1.4e-09 67.0 83 39.8
A02p05710 Brassica napus HOM05D000256 ORTHO05D000119 1.9e-09 66.6 76 44.7
BraA02t05523Z Brassica rapa HOM05D000256 ORTHO05D000119 1.9e-09 66.6 76 44.7
Manes.03G153400 Manihot esculenta HOM05D000256 ORTHO05D000119 1.9e-09 66.6 146 28.8
Aa31LG2G15360 Aethionema arabicum HOM05D000256 ORTHO05D000119 4.2e-09 65.5 152 28.9
CiPaw.14G113300 Carya illinoinensis HOM05D000256 ORTHO05D000119 4.2e-09 65.5 152 26.3
Aa31LG2G14670 Aethionema arabicum HOM05D000256 ORTHO05D000119 5.5e-09 65.1 115 33.9
Prupe.1G062000 Prunus persica HOM05D000256 ORTHO05D000119 5.5e-09 65.1 112 33.0
THA.LOC104814027 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 5.5e-09 65.1 83 34.9
Lalb_Chr11g0072411 Lupinus albus HOM05D000256 ORTHO05D000119 7.2e-09 64.7 148 30.4
THA.LOC104814026 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 7.2e-09 64.7 83 34.9
Manes.03G153550 Manihot esculenta HOM05D000256 ORTHO05D000119 1.2e-08 63.9 110 28.2
Sed0017733 Sechium edule HOM05D000256 ORTHO05D000119 1.2e-08 63.9 155 28.4
Carub.0003s1682 Capsella rubella HOM05D000256 ORTHO05D000119 1.6e-08 63.5 114 33.3
Lalb_Chr15g0076211 Lupinus albus HOM05D000256 ORTHO05D000119 1.6e-08 63.5 148 31.1
MD13G1231600 Malus domestica HOM05D000256 ORTHO05D000119 1.6e-08 63.5 113 30.1
Manes.03G153950 Manihot esculenta HOM05D000256 ORTHO05D000119 2.1e-08 63.2 110 28.2
A08p12390 Brassica napus HOM05D000256 ORTHO05D000119 2.7e-08 62.8 71 35.2
BraA08t33217Z Brassica rapa HOM05D000256 ORTHO05D000119 2.7e-08 62.8 71 35.2
BolC8t48341H Brassica oleracea HOM05D000256 ORTHO05D000119 3.6e-08 62.4 71 35.2
Lalb_Chr15g0076201 Lupinus albus HOM05D000256 ORTHO05D000119 3.6e-08 62.4 150 31.3
CiPaw.01G204900 Carya illinoinensis HOM05D000256 ORTHO05D000119 4.6e-08 62.0 138 29.7
Lalb_Chr02g0153181 Lupinus albus HOM05D000256 ORTHO05D000119 4.6e-08 62.0 150 29.3
Lalb_Chr13g0293461 Lupinus albus HOM05D000256 ORTHO05D000119 4.6e-08 62.0 116 29.3
CsaV3_2G012100 Cucumis sativus L. HOM05D000256 ORTHO05D000119 6.1e-08 61.6 119 29.4
Eucgr.H01885 Eucalyptus grandis HOM05D000256 ORTHO05D000119 6.1e-08 61.6 114 25.4
Prupe.1G055500 Prunus persica HOM05D000256 ORTHO05D000119 6.1e-08 61.6 148 25.7
PGR042G0022 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G0549 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G0996 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G1053 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G1377 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G1542 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G1949 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G2280 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G2642 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G3183 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G3343 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
PGR042G3721 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-08 61.6 139 29.5
AL3G29940 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 7.9e-08 61.2 116 27.6
Phvul.008G063700 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 7.9e-08 61.2 115 28.7
BolC3t13132H Brassica oleracea HOM05D000256 ORTHO05D000119 1.0e-07 60.8 154 28.6
Lalb_Chr02g0153171 Lupinus albus HOM05D000256 ORTHO05D000119 1.0e-07 60.8 150 29.3
Sed0024573 Sechium edule HOM05D000256 ORTHO05D000119 1.0e-07 60.8 69 37.7
CiPaw.01G205000 Carya illinoinensis HOM05D000256 ORTHO05D000119 1.4e-07 60.5 138 28.3
PGR042G2906 Punica granatum HOM05D000256 ORTHO05D000119 1.8e-07 60.1 113 29.2
TPR.G15971 Trifolium pratense HOM05D000256 ORTHO05D000119 1.8e-07 60.1 116 30.2
Sed0016424 Sechium edule HOM05D000256 ORTHO05D000119 2.3e-07 59.7 155 27.7
TPR.G14457 Trifolium pratense HOM05D000256 ORTHO05D000119 3.0e-07 59.3 112 31.2
MD09G1134200 Malus domestica HOM05D000256 ORTHO05D000119 6.7e-07 58.2 70 38.6
Prupe.1G062100 Prunus persica HOM05D000256 ORTHO05D000119 8.8e-07 57.8 70 40.0
TPR.G14451 Trifolium pratense HOM05D000256 ORTHO05D000119 8.8e-07 57.8 113 33.6
BcaB07g31553 Brassica carinata HOM05D000256 ORTHO05D000119 1.1e-06 57.4 84 33.3
Prupe.1G026600 Prunus persica HOM05D000256 ORTHO05D000119 1.5e-06 57.0 152 25.7
Phvul.011G123100 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.0e-06 56.6 118 31.4
Lalb_Chr06g0176221 Lupinus albus HOM05D000256 ORTHO05D000119 2.5e-06 56.2 147 27.9
C03p43630 Brassica napus HOM05D000256 ORTHO05D000119 4.3e-06 55.5 117 29.9
Lalb_Chr06g0176191 Lupinus albus HOM05D000256 ORTHO05D000119 4.3e-06 55.5 155 23.9
Lalb_Chr18g0044391 Lupinus albus HOM05D000256 ORTHO05D000119 5.7e-06 55.1 143 29.4
Lalb_Chr23g0277441 Lupinus albus HOM05D000256 ORTHO05D000119 5.7e-06 55.1 67 38.8
BolC3t16632H Brassica oleracea HOM05D000256 ORTHO05D000119 7.4e-06 54.7 117 29.9
Lalb_Chr15g0076171 Lupinus albus HOM05D000256 ORTHO05D000119 7.4e-06 54.7 117 30.8
VMungo1383G2815 Vigna mungo HOM05D000256 ORTHO05D000119 9.7e-06 54.3 121 30.6


User provided reference genes

Program Settings