Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G38310 Arabidopsis lyrata HOM05D005060 ORTHO05D005975 2.1e-61 239.2 152 100.0
Carub.0005s2365 Capsella rubella HOM05D005060 ORTHO05D005975 5.0e-55 218.0 152 93.4
AT3G56910 Arabidopsis thaliana HOM05D005060 ORTHO05D005975 2.7e-53 212.2 152 88.2
CARHR167060 Cardamine hirsuta HOM05D005060 ORTHO05D005975 1.9e-46 189.5 152 80.3
Sp5g05680 Schrenkiella parvula HOM05D005060 ORTHO05D005975 6.1e-45 184.5 153 82.4
Thhalv10006294m.g Eutrema salsugineum HOM05D005060 ORTHO05D005975 4.8e-42 174.9 152 82.9
BcaC07g40003 Brassica carinata HOM05D005060 ORTHO05D005975 1.6e-40 169.9 153 77.8
C08p32160 Brassica napus HOM05D005060 ORTHO05D005975 1.6e-40 169.9 153 77.8
BolC8t50834H Brassica oleracea HOM05D005060 ORTHO05D005975 1.6e-40 169.9 153 77.8
BcaC02g09878 Brassica carinata HOM05D005060 ORTHO05D005975 1.7e-39 166.4 153 77.1
C04p35630 Brassica napus HOM05D005060 ORTHO05D005975 1.7e-39 166.4 153 77.1
BolC4t25241H Brassica oleracea HOM05D005060 ORTHO05D005975 1.7e-39 166.4 153 77.1
A09p49780 Brassica napus HOM05D005060 ORTHO05D005975 2.9e-39 165.6 153 76.5
BraA09t40431Z Brassica rapa HOM05D005060 ORTHO05D005975 2.9e-39 165.6 153 76.5
A04p03610 Brassica napus HOM05D005060 ORTHO05D005975 4.7e-37 158.3 153 75.2
BraA07t29972Z Brassica rapa HOM05D000531 ORTHO05D001630 1.4e-36 156.8 150 75.3
BcaC07g40108 Brassica carinata HOM05D005060 ORTHO05D005975 4.0e-36 155.2 153 77.1
BcaB02g08343 Brassica carinata HOM05D005060 ORTHO05D005975 2.2e-34 149.4 153 71.9
A07p23120 Brassica napus HOM05D005060 ORTHO05D005975 2.2e-34 149.4 150 72.7
C06p23830 Brassica napus HOM05D005060 ORTHO05D005975 1.1e-33 147.1 154 74.0
BolC6t37551H Brassica oleracea HOM05D005060 ORTHO05D005975 3.1e-33 145.6 153 73.2
BcaC08g44810 Brassica carinata HOM05D005060 ORTHO05D005975 1.2e-32 143.7 145 64.1
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 3.7e-18 95.5 84 71.4
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 3.7e-18 95.5 84 71.4
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 3.7e-18 95.5 84 71.4
Aa31LG10G11770 Aethionema arabicum HOM05D005060 ORTHO05D005975 1.8e-17 93.2 157 60.5
BcaB03g14272 Brassica carinata HOM05D005060 ORTHO05D005975 1.1e-14 84.0 119 56.3
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 4.0e-12 75.5 153 42.5
THA.LOC104803240 Tarenaya hassleriana HOM05D005060 ORTHO05D005975 5.7e-11 71.6 157 55.4
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 1.3e-10 70.5 154 45.5
Thecc.05G132800 Theobroma cacao HOM05D005060 ORTHO05D005975 1.1e-09 67.4 152 44.7
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 1.8e-09 66.6 154 41.6
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 7.0e-09 64.7 156 42.3
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 7.0e-09 64.7 160 40.0
Lalb_Chr14g0365381 Lupinus albus HOM05D005060 ORTHO05D005975 9.2e-09 64.3 166 43.4
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 9.2e-09 64.3 156 49.4
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 9.2e-09 64.3 180 41.7
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 1.2e-08 63.9 158 41.1
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 5.9e-08 61.6 154 43.5
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 5.9e-08 61.6 152 41.4
Os01g0278900 Oryza sativa ssp. japonica HOM05D005060 ORTHO05D005975 7.8e-08 61.2 152 35.5
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 1.0e-07 60.8 157 39.5
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 1.7e-07 60.1 152 45.4
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 8.6e-07 57.8 162 39.5
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 1.1e-06 57.4 155 42.6
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 1.5e-06 57.0 162 40.1
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 1.5e-06 57.0 159 45.3
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 1.5e-06 57.0 167 41.9
TPR.G27972 Trifolium pratense HOM05D005060 ORTHO05D005975 1.5e-06 57.0 153 45.8
Lalb_Chr22g0358011 Lupinus albus HOM05D005060 ORTHO05D005975 2.5e-06 56.2 163 39.9
CSS0016899 Camellia sinensis var. sinensis HOM05D005060 ORTHO05D005975 5.6e-06 55.1 156 42.9
FvH4_7g05170 Fragaria vesca HOM05D005060 ORTHO05D005975 7.3e-06 54.7 93 53.8
FAN06G0894 Fragaria x ananassa HOM05D005060 ORTHO05D005975 7.3e-06 54.7 93 53.8
FAN06G1820 Fragaria x ananassa HOM05D002241 ORTHO05D002458 7.3e-06 54.7 93 53.8


User provided reference genes

Program Settings