Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 0.0e+00 1376.3 708 100.0
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 0.0e+00 1134.4 710 85.9
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.4e-301 1039.3 726 77.4
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 3.4e-263 911.8 725 69.2
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 1.5e-234 816.6 823 59.1
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 7.4e-210 734.6 811 56.2
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 7.4e-210 734.6 815 55.6
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 7.4e-210 734.6 811 56.2
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 7.4e-210 734.6 815 55.6
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 1.1e-208 730.7 811 55.7
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 9.9e-207 724.2 815 56.0
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.2e-167 594.3 570 62.1
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 1.6e-140 504.2 741 47.0
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 7.8e-111 405.6 812 37.6
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.7e-57 228.4 965 26.7
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.6e-55 221.9 837 27.6
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 3.6e-55 220.7 832 27.8
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.5e-53 215.3 825 28.7
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 8.2e-52 209.5 791 28.1
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 2.4e-51 208.0 868 27.6
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 5.9e-50 203.4 875 27.4
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 1.5e-48 198.7 890 26.6
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 2.7e-47 194.5 821 28.4
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 1.8e-43 181.8 782 27.9
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 3.5e-42 177.6 721 25.8
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 4.2e-40 170.6 817 26.1
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 4.2e-40 170.6 766 27.0
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 9.4e-40 169.5 813 26.1
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 9.4e-40 169.5 749 26.4
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 6.8e-38 163.3 526 28.9
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 1.2e-37 162.5 769 25.6
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 1.5e-37 162.2 769 28.1
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 3.4e-37 161.0 770 28.1
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.4e-37 161.0 770 27.0
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 7.5e-37 159.8 742 28.2
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 7.5e-37 159.8 254 40.9
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.3e-36 159.1 770 27.8
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 1.7e-36 158.7 443 30.2
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.7e-36 158.7 241 40.2
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 6.3e-36 156.8 260 41.2
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 1.8e-35 155.2 772 26.3
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 5.4e-35 153.7 258 39.1
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 7.0e-35 153.3 772 25.5
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.7e-34 151.4 764 28.0
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 3.5e-34 151.0 789 25.6
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 5.9e-34 150.2 302 36.1
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 1.0e-33 149.4 250 38.8
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 1.3e-33 149.1 257 39.7
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 2.3e-33 148.3 788 24.4
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.3e-33 148.3 233 40.8
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 2.3e-33 148.3 737 27.1
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 3.8e-33 147.5 251 39.4
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 5.0e-33 147.1 238 41.6
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 6.5e-33 146.7 775 26.8
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 8.6e-33 146.4 787 25.2
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 1.9e-32 145.2 296 36.5
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 4.2e-32 144.1 789 26.6
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 4.2e-32 144.1 785 25.1
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 5.5e-32 143.7 251 37.8
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 7.2e-32 143.3 344 32.8
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 9.5e-32 142.9 335 33.7
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.6e-31 142.1 235 40.4
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 2.8e-31 141.4 293 33.8
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 2.8e-31 141.4 738 25.2
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 3.6e-31 141.0 210 42.4
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 6.1e-31 140.2 728 27.5
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 8.0e-31 139.8 223 38.6
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 1.0e-30 139.4 176 43.8
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 1.4e-30 139.0 756 26.3
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 1.8e-30 138.7 818 24.3
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 3.0e-30 137.9 746 25.5
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 4.0e-30 137.5 267 36.0
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 2.0e-29 135.2 792 25.4
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 2.0e-29 135.2 347 32.9
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 2.0e-29 135.2 714 25.8
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 4.4e-29 134.0 784 23.7
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 4.4e-29 134.0 759 23.8
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 7.5e-29 133.3 288 34.7
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 1.7e-28 132.1 278 34.9
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 2.2e-28 131.7 317 33.8
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 2.2e-28 131.7 745 25.8
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 4.9e-28 130.6 712 25.3
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 6.3e-28 130.2 856 25.4
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 3.1e-27 127.9 277 33.2
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 4.1e-27 127.5 731 25.6
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 4.1e-27 127.5 301 34.6
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 9.2e-27 126.3 256 34.4
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 9.2e-27 126.3 277 32.9
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 1.2e-26 125.9 715 24.2
THA.LOC104803300 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 4.5e-26 124.0 170 48.2
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 5.9e-26 123.6 136 49.3
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 5.0e-25 120.6 873 24.6
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 6.6e-25 120.2 300 32.3
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 1.9e-24 118.6 806 24.8
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.1e-23 115.2 347 29.7
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 6.1e-23 113.6 235 36.2
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 8.0e-23 113.2 674 26.3
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 3.0e-22 111.3 283 32.9
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 6.8e-22 110.2 730 24.4
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 8.9e-22 109.8 282 32.3
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 7.5e-21 106.7 815 24.0
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 1.3e-20 105.9 311 28.6
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 6.4e-20 103.6 233 33.5
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 8.3e-20 103.2 233 33.5
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 8.3e-20 103.2 202 33.2
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 8.3e-20 103.2 315 27.9
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 2.4e-19 101.7 132 46.2
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 4.6e-18 97.4 493 25.2
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 7.8e-18 96.7 140 39.3
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 3.0e-17 94.7 256 31.6
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 3.3e-16 91.3 144 39.6
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 4.3e-16 90.9 119 42.0
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.3e-14 85.1 219 32.9
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.4e-11 75.9 223 29.1
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 1.2e-10 72.8 64 56.2
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 4.3e-08 64.3 227 26.4
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 2.1e-07 62.0 238 26.1
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 1.1e-06 59.7 404 24.5
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 6.8e-06 57.0 143 28.0


User provided reference genes

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