Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 1.9e-198 695.7 354 100.0
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 2.7e-181 638.6 354 93.2
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 3.1e-177 625.2 356 90.7
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 4.9e-170 601.3 359 86.4
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 4.5e-168 594.7 357 86.8
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 8.9e-164 580.5 355 85.6
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 3.7e-154 548.5 365 78.6
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 6.4e-154 547.7 365 79.5
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 6.0e-152 541.2 367 77.4
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 3.9e-151 538.5 367 75.7
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 5.8e-147 524.6 356 76.7
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 4.9e-146 521.5 340 77.6
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 1.4e-145 520.0 353 76.8
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 2.4e-145 519.2 350 77.7
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 4.1e-145 518.5 350 77.7
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 3.4e-139 498.8 354 74.0
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 4.6e-136 488.4 362 70.4
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 2.1e-120 436.4 365 67.1
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 3.7e-109 399.1 345 59.4
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 6.5e-98 361.7 354 54.0
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 2.5e-97 359.8 351 55.6
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 4.6e-96 355.5 354 53.4
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 1.8e-95 353.6 350 52.0
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 3.9e-95 352.4 355 53.2
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 3.9e-95 352.4 341 56.0
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 5.1e-95 352.1 354 52.3
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 1.9e-94 350.1 352 53.4
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 7.4e-94 348.2 352 53.4
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 4.8e-93 345.5 355 51.3
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 4.8e-93 345.5 299 57.9
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 1.8e-92 343.6 351 49.0
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 1.8e-92 343.6 354 54.2
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 4.1e-92 342.4 356 50.3
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 9.1e-92 341.3 358 51.7
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 4.5e-91 339.0 344 54.1
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 5.9e-91 338.6 354 50.8
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 1.3e-90 337.4 349 51.9
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 2.2e-90 336.7 352 50.6
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 2.9e-90 336.3 343 52.2
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 2.9e-90 336.3 350 50.9
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 3.8e-90 335.9 349 51.6
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 3.8e-90 335.9 343 52.2
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 3.8e-90 335.9 350 50.9
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 6.5e-90 335.1 342 54.4
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 6.5e-90 335.1 350 50.6
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 1.4e-89 334.0 355 50.4
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 1.4e-89 334.0 344 53.2
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 1.9e-89 333.6 353 49.9
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.9e-89 333.6 349 51.6
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 9.4e-89 331.3 359 50.4
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 1.2e-88 330.9 355 54.1
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.2e-88 330.9 349 51.3
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 1.6e-88 330.5 316 53.2
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 1.6e-88 330.5 340 54.1
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 2.1e-88 330.1 349 49.3
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 2.7e-88 329.7 204 79.9
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 4.7e-88 328.9 358 48.9
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 7.9e-88 328.2 349 48.7
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 5.1e-87 325.5 351 51.9
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 2.0e-86 323.6 299 55.9
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 7.4e-86 321.6 359 47.9
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 1.7e-85 320.5 346 49.7
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 8.2e-85 318.2 296 55.1
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.1e-84 317.8 346 48.6
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 1.8e-84 317.0 359 50.4
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 5.3e-84 315.5 354 47.7
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 9.1e-84 314.7 346 47.1
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 7.7e-83 311.6 316 53.5
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 1.3e-82 310.8 361 48.2
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 3.2e-81 306.2 297 53.5
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 3.2e-81 306.2 401 44.1
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 4.2e-81 305.8 356 48.6
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 7.2e-81 305.1 257 59.9
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 2.1e-80 303.5 361 48.8
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 2.7e-80 303.1 357 48.7
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 6.1e-80 302.0 355 49.0
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 1.4e-79 300.8 310 48.4
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.3e-79 300.1 360 47.2
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 1.5e-78 297.4 360 46.1
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 2.6e-78 296.6 361 46.3
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 9.7e-78 294.7 360 47.5
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 4.8e-77 292.4 360 46.9
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 4.1e-76 289.3 346 48.3
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 5.3e-76 288.9 309 51.1
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 1.2e-75 287.7 349 47.6
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 5.0e-74 282.3 303 48.8
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 6.5e-74 282.0 301 47.2
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 1.1e-73 281.2 332 47.6
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 2.5e-73 280.0 287 51.6
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 7.2e-73 278.5 374 43.0
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 3.6e-72 276.2 362 44.8
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 8.8e-71 271.6 369 43.9
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 3.3e-70 269.6 362 43.4
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 5.7e-70 268.9 366 42.3
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 2.8e-69 266.5 363 43.0
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 6.3e-69 265.4 356 43.5
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 2.4e-68 263.5 358 46.1
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 3.2e-65 253.1 374 42.8
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 1.2e-64 251.1 370 43.2
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 1.8e-63 247.3 401 38.9
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 5.7e-62 242.3 375 41.9
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 3.0e-55 219.9 282 42.2
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 1.9e-49 200.7 173 57.8
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 2.4e-44 183.7 253 39.1
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 1.9e-41 174.1 314 38.2
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 6.8e-39 165.6 314 37.6
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.2e-37 160.6 241 40.7
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 3.7e-37 159.8 205 40.0
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 4.9e-37 159.5 367 35.4
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.0e-36 155.6 205 40.5
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 9.2e-36 155.2 341 35.2
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 2.7e-35 153.7 209 42.6
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.7e-35 153.7 202 42.1
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.0e-35 152.5 202 41.6
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.6e-34 148.7 201 39.8
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.2e-32 144.8 227 36.6
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.6e-32 143.3 208 39.4
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.1e-32 142.1 193 41.5
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 9.9e-30 135.2 209 37.3
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.0e-27 125.9 151 43.0
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 9.9e-22 108.6 175 37.7
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 9.6e-17 92.0 115 44.3
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 4.7e-16 89.7 76 53.9
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 7.6e-14 82.4 115 43.5
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 1.7e-13 81.3 112 42.9
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 8.4e-13 79.0 125 39.2


User provided reference genes

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