Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 9.5e-89 330.1 161 100.0
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 1.1e-47 193.7 156 64.7
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 1.2e-46 190.3 156 63.5
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 1.2e-46 190.3 156 63.5
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 1.2e-46 190.3 156 63.5
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 1.2e-46 190.3 156 64.1
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 1.5e-46 189.9 156 63.5
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 1.5e-46 189.9 156 63.5
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 2.0e-46 189.5 161 62.7
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 2.2e-45 186.0 155 63.9
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 1.4e-44 183.3 157 62.4
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 4.2e-44 181.8 133 67.7
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 4.2e-44 181.8 133 67.7
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 9.3e-44 180.6 161 63.4
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 1.1e-41 173.7 159 59.1
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 1.1e-41 173.7 159 59.1
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 1.1e-41 173.7 159 59.1
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 2.5e-41 172.6 125 67.2
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.8e-39 166.4 167 58.1
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 4.0e-39 165.2 158 57.0
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.8e-34 149.8 174 50.6
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 2.3e-34 149.4 135 53.3
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 3.3e-33 145.6 124 58.9
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 4.8e-32 141.7 172 48.3
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 6.3e-32 141.4 180 48.3
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 6.1e-27 124.8 146 49.3
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 1.8e-26 123.2 130 50.0
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.8e-26 123.2 153 47.7
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 3.0e-26 122.5 139 48.9
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.2e-24 114.4 151 41.1
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 2.4e-23 112.8 151 37.1
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 2.2e-21 106.3 126 38.1
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.2e-20 102.4 153 37.3
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 9.4e-20 100.9 143 42.7
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.2e-19 100.5 154 37.7
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 1.2e-19 100.5 113 45.1
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 2.3e-18 96.3 125 36.0
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 5.1e-18 95.1 128 39.1
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 6.7e-18 94.7 153 38.6
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-17 94.0 126 40.5
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 2.0e-17 93.2 126 40.5
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 5.7e-17 91.7 127 35.4
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 7.4e-17 91.3 138 37.7
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 7.4e-17 91.3 138 36.2
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 7.4e-17 91.3 138 36.2
Carub.0006s0399 Capsella rubella HOM05D008885 ORTHO05D006152 9.7e-17 90.9 162 40.7
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.3e-16 90.5 139 35.3
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-16 90.5 131 34.4
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-16 90.5 129 37.2
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 1.3e-16 90.5 129 37.2
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.8e-16 89.4 139 38.1
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 4.8e-16 88.6 129 36.4
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 4.8e-16 88.6 141 36.2
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 4.8e-16 88.6 153 36.6
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 8.2e-16 87.8 127 38.6
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 1.4e-15 87.0 129 36.4
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 2.4e-15 86.3 129 35.7
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 3.1e-15 85.9 128 35.2
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 3.1e-15 85.9 145 34.5
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 3.1e-15 85.9 151 31.8
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 4.1e-15 85.5 148 35.8
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.3e-15 85.1 110 40.9
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 5.3e-15 85.1 137 33.6
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 9.1e-15 84.3 139 36.0
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.5e-14 83.6 132 36.4
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.0e-14 83.2 136 35.3
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.5e-14 82.0 136 36.0
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.5e-14 82.0 146 34.2
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 7.7e-14 81.3 114 40.4
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.3e-13 80.5 143 37.8
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 1.7e-13 80.1 144 34.0
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-13 79.7 115 38.3
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.9e-13 79.3 141 33.3
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 2.9e-13 79.3 112 36.6
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 3.8e-13 79.0 137 35.0
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 3.8e-13 79.0 141 31.9
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 8.5e-13 77.8 111 38.7
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-12 77.0 128 31.2
BcaC03g13145 Brassica carinata HOM05D008885 ORTHO05D006152 1.9e-12 76.6 78 52.6
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 1.9e-12 76.6 139 34.5
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 1.9e-12 76.6 139 34.5
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.9e-12 76.6 143 30.8
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.5e-12 76.3 146 30.1
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 2.5e-12 76.3 138 34.1
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 2.5e-12 76.3 142 31.0
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 3.2e-12 75.9 111 37.8
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 7.2e-12 74.7 139 33.8
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 7.2e-12 74.7 151 30.5
C02p02170 Brassica napus HOM05D008885 ORTHO05D006152 9.4e-12 74.3 156 36.5
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.2e-11 73.9 139 33.8
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 2.1e-11 73.2 124 35.5
BolC2t06186H Brassica oleracea HOM05D008885 ORTHO05D006152 2.1e-11 73.2 156 35.9
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 3.6e-11 72.4 157 32.5
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 3.6e-11 72.4 139 33.8
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 3.6e-11 72.4 111 36.0
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 3.6e-11 72.4 139 33.8
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 3.6e-11 72.4 117 35.9
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 3.6e-11 72.4 111 36.0
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 4.7e-11 72.0 126 33.3
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 6.1e-11 71.6 126 33.3
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 8.0e-11 71.2 117 35.9
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 8.0e-11 71.2 126 32.5
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-10 70.9 126 32.5
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-10 70.9 126 32.5
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-10 70.1 151 27.8
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 5.2e-10 68.6 112 36.6
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 5.2e-10 68.6 138 32.6
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.7e-10 68.2 120 34.2
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 8.8e-10 67.8 128 28.9
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 8.8e-10 67.8 128 28.9
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-09 67.4 151 27.2
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.1e-09 67.4 140 32.9
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-09 67.0 151 27.8
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-09 66.6 100 39.0
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.3e-09 65.9 99 34.3
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 3.3e-09 65.9 120 30.8
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 4.4e-09 65.5 123 32.5
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 7.4e-09 64.7 83 36.1
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-08 63.9 128 28.9
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 2.2e-08 63.2 142 31.0
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.2e-08 63.2 98 35.7
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 3.7e-08 62.4 101 32.7
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 3.7e-08 62.4 104 33.7
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 3.7e-08 62.4 101 32.7
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 4.8e-08 62.0 128 27.3
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 4.8e-08 62.0 128 27.3
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 6.3e-08 61.6 126 31.7
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 6.3e-08 61.6 126 31.7
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-07 60.8 126 32.5
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-07 60.8 130 27.7
AL8G32770 Arabidopsis lyrata HOM05D008242 ORTHO05D010974 2.4e-07 59.7 116 33.6
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 2.4e-07 59.7 111 33.3
THA.LOC104820431 Tarenaya hassleriana HOM05D008242 ORTHO05D010974 4.1e-07 58.9 164 29.9
AT4G15710 Arabidopsis thaliana HOM05D008242 ORTHO05D012602 9.1e-07 57.8 117 29.9
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 9.1e-07 57.8 105 31.4
Aa31LG3G11790 Aethionema arabicum HOM05D008242 ORTHO05D010974 1.2e-06 57.4 153 31.4
Aa31sc2648G10 Aethionema arabicum HOM05D008242 ORTHO05D010974 1.2e-06 57.4 137 30.7
Aa31LG3G12600 Aethionema arabicum HOM05D008242 ORTHO05D010974 1.6e-06 57.0 115 31.3
Aa31LG3G12820 Aethionema arabicum HOM05D008242 ORTHO05D010974 1.6e-06 57.0 137 31.4
Aa31LG3G12590 Aethionema arabicum HOM05D008242 ORTHO05D010974 2.0e-06 56.6 139 28.8
Thhalv10026796m.g Eutrema salsugineum HOM05D008242 ORTHO05D012602 2.0e-06 56.6 136 28.7
Aa31LG3G11810 Aethionema arabicum HOM05D008242 ORTHO05D010974 2.6e-06 56.2 114 32.5
AT5G56920 Arabidopsis thaliana HOM05D008242 ORTHO05D010974 3.5e-06 55.8 115 32.2
AL8G32860 Arabidopsis lyrata HOM05D008242 ORTHO05D010974 5.9e-06 55.1 119 30.3
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.9e-06 55.1 165 27.3
Thhalv10015718m.g Eutrema salsugineum HOM05D008242 ORTHO05D010974 5.9e-06 55.1 111 30.6


User provided reference genes

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