Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 1.3e-42 176.0 91 100.0
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 4.6e-40 167.5 91 95.6
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 3.9e-39 164.5 91 94.5
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 3.7e-37 157.9 91 89.0
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 4.0e-36 154.5 91 85.7
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 4.0e-36 154.5 91 85.7
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 4.0e-36 154.5 91 85.7
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 1.5e-35 152.5 91 84.6
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 1.5e-35 152.5 91 84.6
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 2.6e-35 151.8 91 84.6
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 8.4e-34 146.7 90 84.4
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 1.9e-33 145.6 91 81.3
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 1.9e-33 145.6 91 81.3
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 9.3e-33 143.3 91 80.2
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 2.7e-32 141.7 91 79.1
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 3.9e-31 137.9 88 78.4
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 1.8e-28 129.0 92 78.3
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 1.8e-28 129.0 88 76.1
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.8e-28 129.0 88 76.1
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 6.9e-28 127.1 82 79.3
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 3.8e-26 121.3 87 70.1
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 3.8e-26 121.3 88 71.6
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 4.9e-26 120.9 87 70.1
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 6.5e-26 120.6 90 67.8
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 1.4e-25 119.4 91 72.5
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 2.5e-25 118.6 87 71.3
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 3.2e-25 118.2 88 70.5
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 5.5e-25 117.5 87 69.0
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 1.6e-24 115.9 82 70.7
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 1.6e-24 115.9 82 70.7
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 2.1e-24 115.5 87 69.0
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 2.1e-24 115.5 87 69.0
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 2.1e-24 115.5 87 69.0
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 2.7e-24 115.2 79 72.2
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 2.7e-24 115.2 87 66.7
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 4.6e-24 114.4 80 73.8
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 4.6e-24 114.4 87 67.8
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 6.0e-24 114.0 87 67.8
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 1.0e-23 113.2 88 67.0
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.0e-23 113.2 87 65.5
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 1.3e-23 112.8 82 69.5
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 1.3e-23 112.8 87 63.2
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 1.8e-23 112.5 88 67.0
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 3.0e-23 111.7 88 65.9
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 3.0e-23 111.7 82 68.3
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 3.9e-23 111.3 91 63.7
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 3.9e-23 111.3 87 67.8
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 3.9e-23 111.3 87 67.8
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 3.9e-23 111.3 83 67.5
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 5.1e-23 110.9 87 67.8
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 5.1e-23 110.9 90 64.4
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 6.7e-23 110.5 85 68.2
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 6.7e-23 110.5 77 74.0
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 6.7e-23 110.5 87 64.4
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 6.7e-23 110.5 89 65.2
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 6.7e-23 110.5 85 69.4
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 8.7e-23 110.2 88 65.9
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 8.7e-23 110.2 91 63.7
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 8.7e-23 110.2 87 63.2
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 1.1e-22 109.8 86 65.1
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 1.1e-22 109.8 88 69.3
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 1.5e-22 109.4 89 64.0
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 1.5e-22 109.4 82 69.5
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 1.9e-22 109.0 87 62.1
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 2.5e-22 108.6 81 66.7
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 3.3e-22 108.2 89 59.6
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 3.3e-22 108.2 82 70.7
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 3.3e-22 108.2 88 64.8
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 4.3e-22 107.8 91 69.2
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 4.3e-22 107.8 87 59.8
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 7.4e-22 107.1 88 63.6
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 7.4e-22 107.1 79 68.4
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 9.7e-22 106.7 90 61.1
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 9.7e-22 106.7 77 70.1
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 1.3e-21 106.3 87 60.9
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 2.8e-21 105.1 77 70.1
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 3.7e-21 104.8 90 65.6
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 3.7e-21 104.8 87 63.2
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 4.8e-21 104.4 88 64.8
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 4.8e-21 104.4 85 65.9
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 6.3e-21 104.0 87 66.7
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 6.3e-21 104.0 86 64.0
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 1.1e-20 103.2 99 59.6
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 1.4e-20 102.8 90 64.4
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.4e-20 102.8 87 62.1
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 2.4e-20 102.1 90 64.4
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 2.0e-19 99.0 82 61.0
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 4.5e-19 97.8 89 61.8
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.0e-18 96.7 113 52.2
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 6.5e-18 94.0 117 49.6
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 1.9e-17 92.4 82 64.6
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 3.2e-17 91.7 82 63.4
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 4.6e-16 87.8 155 40.6
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 4.6e-16 87.8 155 40.6
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 1.8e-15 85.9 71 66.2
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 8.8e-15 83.6 123 43.1
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 5.7e-14 80.9 90 52.2
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 2.2e-13 79.0 53 69.8
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 8.2e-13 77.0 59 66.1
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 1.8e-12 75.9 196 33.7
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 3.1e-12 75.1 61 62.3
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 3.4e-11 71.6 87 49.4
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 1.7e-10 69.3 48 72.9
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 1.7e-10 69.3 48 77.1
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 5.0e-10 67.8 49 73.5
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 5.0e-10 67.8 83 49.4
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 8.5e-10 67.0 48 72.9
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 1.4e-09 66.2 48 72.9
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 1.9e-09 65.9 48 68.8
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 4.4e-06 54.7 40 60.0


User provided reference genes

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