Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G32210 Arabidopsis lyrata HOM05D010980 ORTHO05D012952 2.6e-48 195.3 114 100.0
AT3G51750 Arabidopsis thaliana HOM05D010980 ORTHO05D012952 5.2e-33 144.4 114 82.5
Thhalv10010929m.g Eutrema salsugineum HOM05D010980 ORTHO05D012952 1.5e-27 126.3 120 63.3
CARHR161380 Cardamine hirsuta HOM05D010980 ORTHO05D012952 1.3e-23 113.2 117 60.7
BcaC06g33347 Brassica carinata HOM05D010980 ORTHO05D012952 8.7e-20 100.5 115 52.2
BraA03t13953Z Brassica rapa HOM05D010980 ORTHO05D012952 4.8e-18 94.7 116 50.0
A03p48480 Brassica napus HOM05D010980 ORTHO05D012952 2.0e-16 89.4 118 58.5
BraA01t02238Z Brassica rapa HOM05D010980 ORTHO05D012952 1.1e-14 83.6 114 59.6
BcaC06g33005 Brassica carinata HOM05D010980 ORTHO05D012952 1.9e-14 82.8 115 53.0
C01p28910 Brassica napus HOM05D010980 ORTHO05D012952 2.1e-10 69.3 114 50.0
BolC1t02824H Brassica oleracea HOM05D010980 ORTHO05D012952 2.1e-10 69.3 114 50.0
BcaNung00371 Brassica carinata HOM05D010980 ORTHO05D012952 2.4e-09 65.9 114 43.0
Sp5g10520 Schrenkiella parvula HOM05D010980 ORTHO05D012952 9.0e-09 63.9 114 50.9
BolC7t45173H Brassica oleracea HOM05D010980 ORTHO05D012952 4.5e-08 61.6 116 37.9
Aa31sc214G60 Aethionema arabicum HOM05D010980 ORTHO05D012952 8.4e-07 57.4 114 37.7
C07p46570 Brassica napus HOM05D010980 ORTHO05D012952 1.4e-06 56.6 58 53.4
Nn2g10979 Nelumbo nucifera HOM05D008779 ORTHO05D010486 9.3e-06 53.9 105 35.2


User provided reference genes

Program Settings