Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G32130 Arabidopsis lyrata HOM05D004300 ORTHO05D005171 1.7e-82 309.3 160 100.0
AL1G23250 Arabidopsis lyrata HOM05D004300 ORTHO05D005171 1.4e-76 289.7 150 99.3
AL3G25280 Arabidopsis lyrata HOM05D004300 ORTHO05D005171 2.4e-60 235.7 128 95.3
AT3G13410 Arabidopsis thaliana HOM05D004300 ORTHO05D005171 9.2e-60 233.8 128 94.5
A05p36120 Brassica napus HOM05D004300 ORTHO05D005171 2.3e-58 229.2 128 92.2
BraA05t22418Z Brassica rapa HOM05D004300 ORTHO05D005171 2.3e-58 229.2 128 92.2
Sp3g11600 Schrenkiella parvula HOM05D004300 ORTHO05D005171 6.6e-58 227.6 128 91.4
Thhalv10021153m.g Eutrema salsugineum HOM05D004300 ORTHO05D005171 7.3e-57 224.2 128 89.8
BcaC05g29181 Brassica carinata HOM05D004300 ORTHO05D005171 1.2e-56 223.4 128 89.8
C05p54490 Brassica napus HOM05D004300 ORTHO05D005171 1.2e-56 223.4 128 89.8
BolC5t34116H Brassica oleracea HOM05D004300 ORTHO05D005171 1.2e-56 223.4 128 89.8
Aa31LG8G620 Aethionema arabicum HOM05D004300 ORTHO05D005171 1.6e-56 223.0 128 87.5
CARHR088020 Cardamine hirsuta HOM05D004300 ORTHO05D005171 2.8e-56 222.2 128 89.1
BcaC01g03994 Brassica carinata HOM05D004300 ORTHO05D005171 1.4e-55 219.9 128 88.3
A03p38190 Brassica napus HOM05D004300 ORTHO05D005171 1.4e-55 219.9 128 88.3
BraA03t12972Z Brassica rapa HOM05D004300 ORTHO05D005171 1.4e-55 219.9 128 88.3
C03p46350 Brassica napus HOM05D004300 ORTHO05D005171 2.3e-55 219.2 128 88.3
BolC3t16904H Brassica oleracea HOM05D004300 ORTHO05D005171 5.2e-55 218.0 128 87.5
BcaB04g18758 Brassica carinata HOM05D004300 ORTHO05D005171 6.8e-55 217.6 128 86.7
Carub.0003s1278 Capsella rubella HOM05D004300 ORTHO05D005171 5.8e-54 214.5 129 87.6
CARHR045240 Cardamine hirsuta HOM05D004300 ORTHO05D005171 1.3e-53 213.4 128 85.2
AL1G63580 Arabidopsis lyrata HOM05D004300 ORTHO05D005171 2.2e-53 212.6 128 85.2
BcaC09g48307 Brassica carinata HOM05D004300 ORTHO05D005171 7.1e-52 207.6 129 84.5
C01p51680 Brassica napus HOM05D004300 ORTHO05D005171 7.1e-52 207.6 129 84.5
BolC1t05112H Brassica oleracea HOM05D004300 ORTHO05D005171 7.1e-52 207.6 129 84.5
Sp1g41170 Schrenkiella parvula HOM05D004300 ORTHO05D005171 7.1e-52 207.6 128 83.6
BraA01t04057Z Brassica rapa HOM05D004300 ORTHO05D005171 1.2e-51 206.8 129 84.5
Carub.0001s4406 Capsella rubella HOM05D004300 ORTHO05D005171 4.6e-51 204.9 128 82.8
A01p40190 Brassica napus HOM05D004300 ORTHO05D005171 2.3e-50 202.6 129 83.7
BcaB04g21013 Brassica carinata HOM05D004300 ORTHO05D005171 3.0e-50 202.2 128 82.8
Aa31LG10G690 Aethionema arabicum HOM05D004300 ORTHO05D005171 1.5e-49 199.9 128 80.5
THA.LOC104822689 Tarenaya hassleriana HOM05D004300 ORTHO05D005171 2.1e-48 196.1 128 76.6
THA.LOC104816065 Tarenaya hassleriana HOM05D004300 ORTHO05D005171 3.3e-41 172.2 128 70.3
COL.COLO4_35065 Corchorus olitorius HOM05D004300 ORTHO05D005171 1.3e-34 150.2 135 56.3
Duzib168G1574 Durio zibethinus HOM05D004300 ORTHO05D005171 1.3e-34 150.2 135 57.0
Gorai.004G019900 Gossypium raimondii HOM05D004300 ORTHO05D005171 1.7e-34 149.8 135 55.6
Manes.03G085800 Manihot esculenta HOM05D004300 ORTHO05D005171 1.7e-34 149.8 135 53.3
Gohir.D08G020600 Gossypium hirsutum HOM05D004300 ORTHO05D005171 5.1e-34 148.3 135 54.8
Potri.001G000900 Populus trichocarpa HOM05D004300 ORTHO05D005171 5.1e-34 148.3 135 57.0
QL01p007808 Quercus lobata HOM05D004300 ORTHO05D005171 6.6e-34 147.9 126 56.3
Thecc.09G206000 Theobroma cacao HOM05D004300 ORTHO05D005171 1.5e-33 146.7 135 56.3
Gohir.A08G014000 Gossypium hirsutum HOM05D004300 ORTHO05D005171 3.3e-33 145.6 125 56.0
CiPaw.13G179700 Carya illinoinensis HOM05D004300 ORTHO05D005171 9.6e-33 144.1 127 56.7
Haze_22917 Corylus avellana HOM05D004300 ORTHO05D005171 1.3e-32 143.7 129 56.6
Cfa009526 Carpinus fangiana HOM05D004300 ORTHO05D005171 1.6e-32 143.3 129 56.6
Atru.chr3.2054 Acer truncatum HOM05D004300 ORTHO05D005171 6.2e-32 141.4 135 52.6
Prupe.6G000900 Prunus persica HOM05D004300 ORTHO05D005171 3.1e-31 139.0 133 51.1
FvH4_3g45990 Fragaria vesca HOM05D004300 ORTHO05D005171 5.3e-31 138.3 135 51.1
FAN16G3749 Fragaria x ananassa HOM05D004300 ORTHO05D005171 5.3e-31 138.3 135 51.1
FAN21G2148 Fragaria x ananassa HOM05D004300 ORTHO05D005171 5.3e-31 138.3 135 51.9
RcHm_v2.0_Chr5g0084101 Rosa chinensis HOM05D004300 ORTHO05D005171 5.3e-31 138.3 135 51.1
TWI32G0643 Tripterygium wilfordii HOM05D004300 ORTHO05D005171 5.3e-31 138.3 135 52.6
FAN25G0045 Fragaria x ananassa HOM05D004300 ORTHO05D005171 6.9e-31 137.9 135 51.1
PGR119G1781 Punica granatum HOM05D004300 ORTHO05D005171 6.9e-31 137.9 126 53.2
TWI34G2030 Tripterygium wilfordii HOM05D004300 ORTHO05D005171 2.6e-30 136.0 123 52.0
Manes.15G111100 Manihot esculenta HOM05D004300 ORTHO05D005171 9.9e-30 134.0 135 51.1
FAN11G3171 Fragaria x ananassa HOM05D004300 ORTHO05D005171 1.3e-29 133.7 135 50.4
GSVIVG01025511001 Vitis vinifera HOM05D004300 ORTHO05D005171 1.7e-29 133.3 124 54.8
TAR369G0454 Trochodendron aralioides HOM05D004300 ORTHO05D005171 8.4e-29 131.0 136 51.5
TWI36G1534 Tripterygium wilfordii HOM05D004300 ORTHO05D005171 1.1e-28 130.6 122 51.6
Nn2g15910 Nelumbo nucifera HOM05D004300 ORTHO05D005171 1.9e-28 129.8 124 52.4
Potri.003G223601 Populus trichocarpa HOM05D004300 ORTHO05D005171 2.4e-28 129.4 135 49.6
Cpa.g.sc119.11 Carica papaya HOM05D004300 ORTHO05D005171 4.2e-28 128.6 135 51.9
MD11G1000600 Malus domestica HOM05D004300 ORTHO05D005171 7.1e-28 127.9 135 45.9
Nn7g35788 Nelumbo nucifera HOM05D004300 ORTHO05D005171 9.3e-28 127.5 127 53.5
Lj1A554T14 Lonicera japonica HOM05D004300 ORTHO05D005171 1.2e-27 127.1 127 50.4
Ciclev10015980m.g Citrus clementina HOM05D004300 ORTHO05D005171 2.1e-27 126.3 126 51.6
Eucgr.J01724 Eucalyptus grandis HOM05D004300 ORTHO05D005171 1.3e-26 123.6 133 48.9
CSS0042366 Camellia sinensis var. sinensis HOM05D004300 ORTHO05D005171 2.3e-26 122.9 136 47.1
Sabra02G0167600 Salix brachista HOM05D004300 ORTHO05D005171 6.7e-26 121.3 115 55.7
PSO339G2659 Papaver somniferum HOM05D004300 ORTHO05D005171 1.1e-25 120.6 137 48.9
Lalb_Chr19g0139761 Lupinus albus HOM05D004300 ORTHO05D005171 1.5e-25 120.2 111 50.5
VMungo1127G0835 Vigna mungo HOM05D004300 ORTHO05D005171 2.5e-25 119.4 135 44.4
Dinv31991 Davidia involucrata HOM05D004300 ORTHO05D005171 7.4e-25 117.9 127 48.0
Sopen01g018940 Solanum pennellii HOM05D004300 ORTHO05D005171 7.4e-25 117.9 134 48.5
Actinidia16226 Actinidia chinensis HOM05D004300 ORTHO05D005171 9.6e-25 117.5 127 48.0
Solyc01g049890.3 Solanum lycopersicum HOM05D004300 ORTHO05D005171 9.6e-25 117.5 134 48.5
Lalb_Chr01g0001071 Lupinus albus HOM05D004300 ORTHO05D005171 1.3e-24 117.1 115 47.0
AUR62023250 Chenopodium quinoa HOM05D004300 ORTHO05D005171 1.6e-24 116.7 127 44.1
Medtr4g076880 Medicago truncatula HOM05D004300 ORTHO05D005171 1.6e-24 116.7 131 43.5
CANSAT54G1622 Cannabis sativa HOM05D004300 ORTHO05D005171 2.1e-24 116.3 133 44.4
Peaxi162Scf00186g01713 Petunia axillaris HOM05D004300 ORTHO05D005171 2.1e-24 116.3 134 47.0
CDE11G0372 Ceratophyllum demersum HOM05D004300 ORTHO05D005171 2.8e-24 115.9 136 44.1
Glyma.11G094000 Glycine max HOM05D004300 ORTHO05D005171 2.8e-24 115.9 126 44.4
Glyma.12G020500 Glycine max HOM05D004300 ORTHO05D005171 2.8e-24 115.9 135 41.5
arahy.Tifrunner.gnm1.ann1.C8XIPM Arachis hypogaea HOM05D004300 ORTHO05D005171 4.8e-24 115.2 135 41.5
arahy.Tifrunner.gnm1.ann1.S4YUBI Arachis hypogaea HOM05D004300 ORTHO05D005171 4.8e-24 115.2 135 41.5
PSO384G2337 Papaver somniferum HOM05D004300 ORTHO05D005171 4.8e-24 115.2 137 47.4
CANSAT35G0440 Cannabis sativa HOM05D004300 ORTHO05D005171 8.1e-24 114.4 133 42.1
EL10Ac2g04496 Beta vulgaris HOM05D004300 ORTHO05D005171 1.1e-23 114.0 134 41.0
Medtr1g055160 Medicago truncatula HOM05D004300 ORTHO05D005171 1.1e-23 114.0 131 42.7
MBI19_g24076_MAGBIO Magnolia biondii HOM05D004300 ORTHO05D005171 1.4e-23 113.6 136 45.6
ATR0068G043 Amborella trichopoda HOM05D004300 ORTHO05D005171 2.4e-23 112.8 136 44.1
Ca_18976_v3 Cicer arietinum L. HOM05D004300 ORTHO05D005171 2.4e-23 112.8 135 41.5
Ca_30870_v3 Cicer arietinum L. HOM05D004300 ORTHO05D005171 2.4e-23 112.8 135 41.5
Ah.16g101370 Amaranthus hybridus HOM05D003924 ORTHO05D005216 4.0e-23 112.1 136 41.9
DCAR_019963 Daucus carota HOM05D004300 ORTHO05D005171 4.0e-23 112.1 128 46.1
Ah.10g037910 Amaranthus hybridus HOM05D004300 ORTHO05D005171 5.3e-23 111.7 136 42.6
Os12g0123900 Oryza sativa ssp. japonica HOM05D004300 ORTHO05D005171 5.3e-23 111.7 133 41.4
Sed0000768 Sechium edule HOM05D004300 ORTHO05D005171 6.9e-23 111.3 135 43.7
Os11g0127700 Oryza sativa ssp. japonica HOM05D004300 ORTHO05D005171 9.0e-23 110.9 113 46.9
Psat7g172560 Pisum sativum HOM05D004300 ORTHO05D005171 9.0e-23 110.9 135 43.0
CDE02G0988 Ceratophyllum demersum HOM05D004300 ORTHO05D005171 1.2e-22 110.5 130 43.8
HanXRQChr03g0088211 Helianthus annuus HOM05D004300 ORTHO05D005171 1.2e-22 110.5 136 41.9
Rhsim09G0130300 Rhododendron simsii HOM05D004300 ORTHO05D005171 1.5e-22 110.2 137 46.7
Nitab4.5_0000075g0150 Nicotiana tabacum HOM05D004300 ORTHO05D005171 2.0e-22 109.8 134 44.8
Sc14g0004840 Simmondsia chinensis HOM05D004300 ORTHO05D005171 3.4e-22 109.0 136 41.2
PGSC0003DMG400031504 Solanum tuberosum HOM05D004300 ORTHO05D005171 3.4e-22 109.0 122 48.4
Sabra01G0000800 Salix brachista HOM05D004300 ORTHO05D005171 4.5e-22 108.6 177 39.0
Zm00001eb093640 Zea mays HOM05D004300 ORTHO05D005171 4.5e-22 108.6 113 46.0
ECA234G4359 Erigeron canadensis HOM05D004300 ORTHO05D005171 5.8e-22 108.2 136 41.9
Phvul.011G023200 Phaseolus vulgaris HOM05D004300 ORTHO05D005171 7.6e-22 107.8 135 41.5
Sed0018013 Sechium edule HOM05D004300 ORTHO05D005171 7.6e-22 107.8 121 47.1
Zm00001eb195780 Zea mays HOM05D004300 ORTHO05D005171 2.2e-21 106.3 111 45.9
PGSC0003DMG400021083 Solanum tuberosum HOM05D004300 ORTHO05D005171 2.9e-21 105.9 122 47.5
Lj3g0008656 Lotus japonicus HOM05D004300 ORTHO05D005171 3.8e-21 105.5 126 42.9
CAN.G40.2 Capsicum annuum HOM05D004300 ORTHO05D005171 1.9e-20 103.2 134 44.8
Cc03_g11060 Coffea canephora HOM05D004300 ORTHO05D005171 2.5e-20 102.8 127 40.9
MSTRG.18890 Avicennia marina HOM05D004300 ORTHO05D005171 9.3e-20 100.9 134 38.1
MSTRG.20930 Avicennia marina HOM05D004300 ORTHO05D005171 1.2e-19 100.5 127 38.6
Hund16197 Selenicereus undatus HOM05D004300 ORTHO05D005171 1.2e-19 100.5 115 41.7
HPP92_021175 Vanilla planifolia HOM05D004300 ORTHO05D005171 1.2e-19 100.5 120 43.3
Nitab4.5_0000890g0150 Nicotiana tabacum HOM05D004300 ORTHO05D005171 1.6e-19 100.1 114 46.5
SalBow2G2450 Salvia bowleyana HOM05D004300 ORTHO05D005171 2.7e-19 99.4 134 39.6
CsaV3_6G004960 Cucumis sativus L. HOM05D004300 ORTHO05D005171 3.5e-19 99.0 122 41.0
unitig_22.g5956 Utricularia gibba HOM05D004300 ORTHO05D005171 3.5e-19 99.0 131 39.7
MELO3C019973.2 Cucumis melo HOM05D004300 ORTHO05D005171 4.6e-19 98.6 121 41.3
ClCG10G005160 Citrullus lanatus HOM05D004300 ORTHO05D005171 7.9e-19 97.8 123 39.8
TAR623G1572 Trochodendron aralioides HOM05D004300 ORTHO05D005171 1.0e-18 97.4 136 42.6
AT1G55546 Arabidopsis thaliana HOM05D004300 ORTHO05D005171 1.3e-18 97.1 63 81.0
ClCG08G007290 Citrullus lanatus HOM05D004300 ORTHO05D005171 5.1e-18 95.1 122 41.0
Lsat_1_v5_gn_4_42220 Lactuca sativa HOM05D004300 ORTHO05D005171 5.1e-18 95.1 136 41.2
SEGI_28087 Sequoiadendron giganteum HOM05D004300 ORTHO05D005171 3.3e-17 92.4 133 39.1
RcHm_v2.0_Chr4g0398051 Rosa chinensis HOM05D004300 ORTHO05D005171 4.3e-17 92.0 90 51.1
SGA_v2.0_scaffold6G03345 Striga asiatica HOM05D004300 ORTHO05D005171 4.3e-17 92.0 134 37.3
Potri.012G124888 Populus trichocarpa HOM05D004300 ORTHO05D005171 9.6e-17 90.9 97 51.5
Migut.D02580 Erythranthe guttata HOM05D004300 ORTHO05D005171 6.2e-16 88.2 127 37.0
Thhalv10011977m.g Eutrema salsugineum HOM05D004300 ORTHO05D005171 6.2e-16 88.2 74 66.2
SGA_v2.0_scaffold3G01707 Striga asiatica HOM05D004300 ORTHO05D005171 3.1e-15 85.9 134 35.8
Sabra03G0048200 Salix brachista HOM05D004300 ORTHO05D005171 2.0e-14 83.2 156 35.9
Potri.008G223987 Populus trichocarpa HOM05D004300 ORTHO05D005171 7.6e-14 81.3 103 48.5
RcHm_v2.0_Chr7g0192441 Rosa chinensis HOM05D004300 ORTHO05D005171 6.5e-13 78.2 82 51.2
MD03G1001400 Malus domestica HOM05D004300 ORTHO05D005171 8.4e-13 77.8 82 45.1
vmacro04045 Vaccinium macrocarpon HOM05D004300 ORTHO05D005171 9.3e-12 74.3 92 44.6
Zm00001eb080660 Zea mays HOM05D004300 ORTHO05D005171 1.6e-08 63.5 60 48.3
Zm00001eb043250 Zea mays HOM05D004300 ORTHO05D005171 1.1e-07 60.8 60 48.3
Zm00001eb363780 Zea mays HOM05D004300 ORTHO05D005171 1.1e-07 60.8 62 46.8
Zm00001eb387380 Zea mays HOM05D004300 ORTHO05D005171 1.1e-07 60.8 60 48.3
TPR.G3681 Trifolium pratense HOM05D004300 ORTHO05D005171 5.3e-07 58.5 72 37.5
Pp3c1_26860 Physcomitrium patens HOM05D004300 ORTHO05D005171 4.5e-06 55.5 124 25.0


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