Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G31400 Arabidopsis lyrata HOM05D011938 ORTHO05D013958 2.4e-42 175.6 128 100.0
AT3G50980 Arabidopsis thaliana HOM05D011938 ORTHO05D013958 2.1e-38 162.5 129 95.3
Carub.0005s1738 Capsella rubella HOM05D011938 ORTHO05D013958 1.7e-24 116.3 111 81.1
CARHR160550 Cardamine hirsuta HOM05D011938 ORTHO05D013958 7.2e-23 110.9 107 74.8
BcaC07g39567 Brassica carinata HOM05D011938 ORTHO05D013958 6.7e-21 104.4 138 76.8
C08p26230 Brassica napus HOM05D011938 ORTHO05D013958 6.7e-21 104.4 138 76.8
Sp5g11230 Schrenkiella parvula HOM05D011938 ORTHO05D013958 2.2e-19 99.4 132 75.8
BcaC07g39572 Brassica carinata HOM05D011938 ORTHO05D013958 3.7e-19 98.6 138 74.6
Thhalv10010821m.g Eutrema salsugineum HOM05D011938 ORTHO05D013958 5.9e-17 91.3 116 70.7
BcaB01g00557 Brassica carinata HOM05D011938 ORTHO05D013958 2.5e-15 85.9 137 57.7
BraA09t39867Z Brassica rapa HOM05D011938 ORTHO05D013958 1.6e-14 83.2 138 70.3
BolC8t50241H Brassica oleracea HOM05D011938 ORTHO05D013958 1.2e-12 77.0 121 75.2
BcaC07g39570 Brassica carinata HOM05D011938 ORTHO05D013958 2.0e-12 76.3 60 73.3
THA.LOC104821305 Tarenaya hassleriana HOM05D010201 ORTHO05D012293 7.5e-12 74.3 136 54.4
A09p44090 Brassica napus HOM05D011938 ORTHO05D013958 1.8e-10 69.7 97 69.1
BcaNung04501 Brassica carinata HOM05D010201 ORTHO05D012293 5.5e-07 58.2 158 32.9
Aa31LG4G19090 Aethionema arabicum HOM05D011938 ORTHO05D013958 7.2e-07 57.8 111 52.3
BcaB07g29669 Brassica carinata HOM05D010201 ORTHO05D012293 2.7e-06 55.8 136 48.5
Carub.0008s2811 Capsella rubella HOM05D010201 ORTHO05D012293 3.6e-06 55.5 89 57.3
BcaNung04503 Brassica carinata HOM05D010201 ORTHO05D012293 8.0e-06 54.3 157 40.8


User provided reference genes

Program Settings