Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 4.1e-201 704.9 465 100.0
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 1.2e-155 553.9 430 84.7
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 5.6e-150 535.0 433 82.9
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.3e-146 523.9 431 81.9
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 2.6e-139 499.6 429 81.1
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 2.6e-99 366.7 418 66.5
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.5e-94 350.9 411 63.5
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 3.3e-94 349.7 409 64.5
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 2.0e-91 340.5 408 63.0
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 3.8e-90 336.3 409 64.1
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 5.5e-89 332.4 410 61.0
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.7e-88 330.1 401 63.6
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.5e-86 324.3 410 62.4
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 4.4e-86 322.8 420 60.0
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 1.7e-85 320.9 412 60.4
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 3.1e-84 316.6 464 55.8
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 9.1e-84 315.1 441 58.0
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 1.2e-83 314.7 441 61.0
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.6e-83 314.3 418 61.0
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 3.5e-83 313.2 403 61.3
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 4.5e-83 312.8 418 58.9
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 7.7e-83 312.0 417 60.2
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.0e-82 311.6 414 59.7
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 2.2e-82 310.5 404 59.7
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 2.9e-82 310.1 403 60.3
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 3.8e-82 309.7 422 59.0
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 3.8e-82 309.7 412 62.1
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 1.1e-81 308.1 432 57.6
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 1.1e-81 308.1 416 60.6
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 1.5e-81 307.8 438 54.6
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 3.2e-81 306.6 429 58.5
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 1.2e-80 304.7 421 52.7
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.7e-80 303.5 405 60.7
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 2.7e-80 303.5 405 60.7
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 6.1e-80 302.4 397 59.7
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.1e-80 302.4 407 61.7
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 6.1e-80 302.4 427 57.6
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 8.0e-80 302.0 413 60.8
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 8.0e-80 302.0 416 58.9
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 8.0e-80 302.0 412 60.4
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 8.0e-80 302.0 438 56.8
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.2e-78 298.1 391 60.6
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 2.0e-78 297.4 378 60.6
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 2.6e-78 297.0 400 60.5
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 5.7e-78 295.8 418 58.6
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 9.8e-78 295.0 428 58.2
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 1.7e-77 294.3 411 60.6
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 2.2e-77 293.9 419 58.5
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 2.2e-77 293.9 405 56.8
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 4.9e-77 292.7 219 79.0
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 6.3e-77 292.4 217 77.0
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.1e-76 291.6 429 56.4
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.8e-76 290.8 419 59.2
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 1.8e-76 290.8 425 57.9
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 3.1e-76 290.0 443 56.2
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 3.1e-76 290.0 419 58.7
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 5.4e-76 289.3 417 60.4
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.2e-75 288.1 282 67.7
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.6e-75 287.7 451 52.8
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 2.0e-75 287.3 448 54.5
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 2.7e-75 287.0 425 56.5
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 5.9e-75 285.8 414 55.6
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 7.7e-75 285.4 420 58.8
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 5.0e-74 282.7 426 57.7
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 8.6e-74 282.0 381 59.8
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.5e-73 281.2 414 57.5
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.2e-72 278.1 272 65.1
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.6e-72 277.7 416 58.4
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 2.8e-72 276.9 258 69.4
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 6.1e-72 275.8 440 56.4
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 8.0e-72 275.4 413 59.1
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 5.2e-71 272.7 161 83.9
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 4.4e-70 269.6 220 71.4
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 9.8e-70 268.5 491 49.3
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 9.8e-70 268.5 399 56.1
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 4.9e-69 266.2 424 55.9
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 1.4e-68 264.6 459 56.6
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.8e-68 264.2 161 81.4
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 7.0e-68 262.3 410 54.9
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 9.2e-68 261.9 447 53.5
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 9.2e-68 261.9 413 55.7
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 1.2e-67 261.5 161 80.7
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 1.2e-67 261.5 415 46.3
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 4.6e-67 259.6 421 54.9
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 5.0e-66 256.1 407 55.5
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 5.0e-66 256.1 449 51.2
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.5e-65 253.8 160 77.5
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 7.3e-65 252.3 263 60.5
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.5e-62 242.3 147 81.0
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 1.4e-60 238.0 160 73.1
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.9e-60 237.7 159 73.6
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 3.2e-60 236.9 160 72.5
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 3.2e-60 236.9 160 72.5
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 3.2e-60 236.9 160 72.5
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 3.2e-60 236.9 160 72.5
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 3.2e-60 236.9 238 63.4
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 1.6e-59 234.6 160 71.9
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 3.5e-59 233.4 238 62.6
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 1.9e-57 227.6 310 56.5
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 4.1e-52 209.9 161 65.8
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 2.7e-51 207.2 157 65.6
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 5.6e-49 199.5 161 63.4
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 6.8e-47 192.6 160 61.2
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 6.8e-47 192.6 160 61.2
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 7.1e-44 182.6 162 59.9
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 7.1e-44 182.6 162 59.9
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.7e-43 180.6 381 52.2
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 5.8e-38 162.9 152 57.9
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 4.0e-31 140.2 163 49.1
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 4.6e-27 126.7 163 46.0
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.6e-24 118.2 161 42.9
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 3.1e-23 114.0 159 44.7
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 2.4e-15 87.8 58 75.9
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 5.3e-15 86.7 139 39.6
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 5.5e-12 76.6 112 42.0
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 1.1e-09 68.9 95 45.3
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 5.3e-07 60.1 85 41.2
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 4.5e-06 57.0 110 34.5


User provided reference genes

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