Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G30720 Arabidopsis lyrata HOM05D009838 ORTHO05D012149 2.9e-76 288.9 190 100.0
AT3G50570 Arabidopsis thaliana HOM05D009838 ORTHO05D012149 1.3e-73 280.0 190 96.8
Carub.0005s1689 Capsella rubella HOM05D009838 ORTHO05D012149 2.7e-66 255.8 191 91.1
CARHR160080 Cardamine hirsuta HOM05D009838 ORTHO05D012149 3.0e-65 252.3 189 86.2
Thhalv10011140m.g Eutrema salsugineum HOM05D009838 ORTHO05D012149 1.9e-59 233.0 198 81.8
Sp5g11640 Schrenkiella parvula HOM05D009838 ORTHO05D012149 4.2e-59 231.9 193 83.4
BcaB01g00608 Brassica carinata HOM05D009838 ORTHO05D012149 6.4e-52 208.0 238 59.7
BcaC07g39518 Brassica carinata HOM05D009838 ORTHO05D012149 2.4e-51 206.1 212 64.6
BolC8t50182H Brassica oleracea HOM05D009838 ORTHO05D012149 3.2e-51 205.7 224 62.9
A09p43610 Brassica napus HOM05D009838 ORTHO05D012149 1.6e-50 203.4 235 59.6
BraA09t39822Z Brassica rapa HOM05D009838 ORTHO05D012149 2.1e-50 203.0 235 59.6
C08p25630 Brassica napus HOM05D009838 ORTHO05D012149 6.0e-50 201.4 235 60.0
Thhalv10012327m.g Eutrema salsugineum HOM05D009838 ORTHO05D012149 2.3e-33 146.4 247 53.4
AL1G52260 Arabidopsis lyrata HOM05D009838 ORTHO05D012149 1.3e-31 140.6 219 53.4
Carub.0001s3514 Capsella rubella HOM05D009838 ORTHO05D012149 9.0e-30 134.4 226 50.4
AT1G44224 Arabidopsis thaliana HOM05D009838 ORTHO05D012149 2.0e-29 133.3 223 48.4
CARHR035890 Cardamine hirsuta HOM05D009838 ORTHO05D012149 7.6e-29 131.3 85 69.4
Sp1g33500 Schrenkiella parvula HOM05D009838 ORTHO05D012149 7.9e-26 121.3 248 52.0
Aa31LG4G18740 Aethionema arabicum HOM05D009838 ORTHO05D012149 7.4e-24 114.8 192 55.7
A01p24030 Brassica napus HOM05D009838 ORTHO05D012149 1.1e-14 84.3 56 66.1
BraA01t02313Z Brassica rapa HOM05D009838 ORTHO05D012149 1.8e-14 83.6 56 66.1
THA.LOC104806833 Tarenaya hassleriana HOM05D009838 ORTHO05D012149 2.5e-11 73.2 186 31.2
Thhalv10011704m.g Eutrema salsugineum HOM05D009838 ORTHO05D195974 5.5e-11 72.0 48 64.6
C01p29720 Brassica napus HOM05D009838 ORTHO05D012149 9.4e-11 71.2 46 71.7
BolC1t02912H Brassica oleracea HOM05D009838 ORTHO05D012149 9.4e-11 71.2 46 71.7


User provided reference genes

Program Settings