Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G30600 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 3.7e-100 368.2 190 100.0
AT3G50450 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 3.5e-82 308.5 190 83.7
AT3G50470 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 4.7e-63 245.0 215 63.7
AT3G50460 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 4.0e-62 241.9 206 65.0
AL5G30620 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 8.9e-62 240.7 215 63.7
Carub.0005s1680 Capsella rubella HOM05D008738 ORTHO05D010755 2.6e-61 239.2 215 62.3
AL5G30610 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 5.8e-61 238.0 207 62.3
CARHR159980 Cardamine hirsuta HOM05D008738 ORTHO05D010755 5.8e-61 238.0 208 62.5
Thhalv10010714m.g Eutrema salsugineum HOM05D008738 ORTHO05D010755 1.4e-59 233.4 210 62.9
BcaB01g00613 Brassica carinata HOM05D008738 ORTHO05D010755 1.6e-58 229.9 208 62.0
A09p43500 Brassica napus HOM05D008738 ORTHO05D010755 1.7e-57 226.5 210 60.0
BraA09t39815Z Brassica rapa HOM05D008738 ORTHO05D010755 5.1e-57 224.9 210 59.5
BcaB01g00614 Brassica carinata HOM05D008738 ORTHO05D010755 1.1e-56 223.8 213 60.1
BcaC07g39509 Brassica carinata HOM05D008738 ORTHO05D010755 9.6e-56 220.7 210 58.1
BcaC07g39511 Brassica carinata HOM05D008738 ORTHO05D010755 1.6e-55 219.9 213 59.2
CARHR159990 Cardamine hirsuta HOM05D008738 ORTHO05D010755 4.8e-55 218.4 213 58.2
BolC8t50176H Brassica oleracea HOM05D008738 ORTHO05D010755 1.4e-54 216.9 213 58.7
C08p25550 Brassica napus HOM05D008738 ORTHO05D010755 2.0e-53 213.0 213 58.2
A09p43510 Brassica napus HOM05D008738 ORTHO05D010755 9.9e-53 210.7 214 57.5
Carub.0005s1679 Capsella rubella HOM05D008738 ORTHO05D010755 2.2e-52 209.5 192 59.9
BraA09t39817Z Brassica rapa HOM05D008738 ORTHO05D010755 3.8e-52 208.8 212 58.0
BraA09t39816Z Brassica rapa HOM05D008738 ORTHO05D010755 6.4e-52 208.0 214 56.5
A09p43530 Brassica napus HOM05D008738 ORTHO05D010755 3.2e-51 205.7 212 57.5
Aa31LG4G18690 Aethionema arabicum HOM05D008738 ORTHO05D010755 3.0e-49 199.1 205 57.1
A09p43550 Brassica napus HOM05D008738 ORTHO05D010755 1.2e-45 187.2 212 53.3
BcaC06g33094 Brassica carinata HOM05D008738 ORTHO05D010755 1.1e-43 180.6 208 53.8
AL5G30630 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.8e-41 173.3 207 52.2
A03p47800 Brassica napus HOM05D008738 ORTHO05D010755 3.9e-41 172.2 206 53.4
BraA03t13890Z Brassica rapa HOM05D008738 ORTHO05D010755 3.9e-41 172.2 206 53.4
C08p25540 Brassica napus HOM05D008738 ORTHO05D010755 5.5e-35 151.8 146 61.0
Aa31LG4G18680 Aethionema arabicum HOM05D008738 ORTHO05D010755 1.1e-27 127.5 184 39.7
BcaB01g00612 Brassica carinata HOM05D008738 ORTHO05D010755 1.2e-18 97.4 153 42.5
BcaC06g33093 Brassica carinata HOM05D008738 ORTHO05D010755 5.3e-14 82.0 144 41.0
PSO210G7782 Papaver somniferum HOM05D000033 ORTHO05D030421 5.0e-12 75.5 139 31.7
Manes.12G094300 Manihot esculenta HOM05D058365 ORTHO05D010755 7.2e-11 71.6 189 31.7
Manes.12G094400 Manihot esculenta HOM05D058365 ORTHO05D010755 7.9e-10 68.2 194 30.4
Cc07_g05700 Coffea canephora HOM05D000529 ORTHO05D000472 1.0e-09 67.8 141 34.0
AT3G50480 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 5.1e-09 65.5 150 31.3
MD02G1163800 Malus domestica HOM05D008738 ORTHO05D010755 5.7e-08 62.0 140 30.0
Oeu005309.1 Olea europaea HOM05D000529 ORTHO05D000472 7.4e-08 61.6 142 30.3
Prupe.7G140100 Prunus persica HOM05D008738 ORTHO05D010755 9.7e-08 61.2 144 33.3
Oeu036816.1 Olea europaea HOM05D000529 ORTHO05D036481 6.3e-07 58.5 144 28.5
Sabra07G0034600 Salix brachista HOM05D037871 ORTHO05D010755 6.3e-07 58.5 139 31.7
Haze_15455 Corylus avellana HOM05D008738 ORTHO05D010755 8.2e-07 58.2 136 25.7
Dinv39897 Davidia involucrata HOM05D000529 ORTHO05D000472 8.2e-07 58.2 141 30.5
TAR381G0813 Trochodendron aralioides HOM05D000529 ORTHO05D000472 1.1e-06 57.8 165 27.9
GSVIVG01003555001 Vitis vinifera HOM05D000529 ORTHO05D000472 1.1e-06 57.8 126 31.7
C07p45760 Brassica napus HOM05D008738 ORTHO05D010755 2.4e-06 56.6 95 40.0
Haze_15456 Corylus avellana HOM05D008738 ORTHO05D010755 2.4e-06 56.6 113 28.3
Cfa003965 Carpinus fangiana HOM05D008738 ORTHO05D010755 4.1e-06 55.8 129 26.4
CiPaw.02G010900 Carya illinoinensis HOM05D008738 ORTHO05D010755 9.1e-06 54.7 123 27.6
Duzib147G1638 Durio zibethinus HOM05D000529 ORTHO05D000472 9.1e-06 54.7 142 26.8


User provided reference genes

Program Settings