Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G30090 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 3.3e-37 157.9 82 100.0
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 5.8e-10 67.4 41 87.8
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 1.7e-09 65.9 41 87.8
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 1.7e-09 65.9 41 87.8
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 1.7e-09 65.9 41 87.8
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 2.2e-09 65.5 41 85.4
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 8.4e-09 63.5 35 97.1
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 1.1e-08 63.2 41 85.4
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 1.1e-08 63.2 41 85.4
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 1.1e-08 63.2 41 85.4
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 1.1e-08 63.2 41 85.4
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 1.4e-08 62.8 41 82.9
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 2.5e-08 62.0 41 82.9
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 2.5e-08 62.0 41 82.9
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 2.5e-08 62.0 41 82.9
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 3.2e-08 61.6 35 94.3
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 3.2e-08 61.6 35 94.3
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 4.2e-08 61.2 41 80.5
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 7.1e-08 60.5 35 91.4
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 7.1e-08 60.5 41 82.9
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 1.6e-07 59.3 35 88.6
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 2.7e-07 58.5 35 88.6
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 2.7e-07 58.5 35 88.6
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 7.9e-07 57.0 41 68.3
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 1.8e-06 55.8 35 80.0
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 1.8e-06 55.8 35 80.0
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.8e-06 55.8 35 80.0
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 2.3e-06 55.5 35 77.1
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 2.3e-06 55.5 35 77.1
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 2.3e-06 55.5 35 80.0
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 3.0e-06 55.1 35 80.0
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 3.0e-06 55.1 41 65.9
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 3.9e-06 54.7 35 77.1
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 3.9e-06 54.7 35 77.1
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.9e-06 54.7 35 77.1
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 5.1e-06 54.3 35 74.3
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 5.1e-06 54.3 35 80.0
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 5.1e-06 54.3 35 80.0
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 5.1e-06 54.3 35 80.0
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 5.1e-06 54.3 35 80.0
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.1e-06 54.3 35 77.1
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 6.7e-06 53.9 35 77.1
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 6.7e-06 53.9 35 71.4
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 6.7e-06 53.9 35 71.4
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 6.7e-06 53.9 35 74.3
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 6.7e-06 53.9 35 80.0
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 6.7e-06 53.9 35 77.1
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 8.7e-06 53.5 35 74.3
AL5G30110 Arabidopsis lyrata HOM05D000015 ORTHO05D012566 8.7e-06 53.5 27 96.3
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 8.7e-06 53.5 35 77.1


User provided reference genes

Program Settings