Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G28140 Arabidopsis lyrata HOM05D011956 ORTHO05D014041 2.4e-297 1024.6 485 100.0
Carub.0005s1487 Capsella rubella HOM05D011956 ORTHO05D014041 9.9e-182 640.6 449 71.3
C02p30570 Brassica napus HOM05D011956 ORTHO05D014041 1.2e-134 484.2 479 54.5
BolC2t09107H Brassica oleracea HOM05D011956 ORTHO05D014041 1.2e-134 484.2 479 54.5
A06p19180 Brassica napus HOM05D011956 ORTHO05D014041 1.4e-132 477.2 485 53.6
BraA06t25001Z Brassica rapa HOM05D011956 ORTHO05D014041 7.2e-132 474.9 486 53.7
CARHR157320 Cardamine hirsuta HOM05D011956 ORTHO05D014041 2.6e-121 439.9 460 52.6
BcaC07g39335 Brassica carinata HOM05D011956 ORTHO05D014041 4.8e-120 435.6 484 50.6
C08p23510 Brassica napus HOM05D011956 ORTHO05D014041 1.5e-116 424.1 484 49.8
AT3G15910 Arabidopsis thaliana HOM05D011956 ORTHO05D014041 2.0e-102 377.1 311 59.8
Carub.0003s1565 Capsella rubella HOM05D011956 ORTHO05D014041 2.3e-101 373.6 313 60.1
Thhalv10015397m.g Eutrema salsugineum HOM05D011956 ORTHO05D014041 2.9e-101 373.2 311 61.1
CARHR157510 Cardamine hirsuta HOM05D011956 ORTHO05D014041 8.0e-99 365.2 291 61.2
Sp5g13480 Schrenkiella parvula HOM05D011956 ORTHO05D014041 2.1e-62 244.2 204 56.4
BolC8t49979H Brassica oleracea HOM05D011956 ORTHO05D014041 1.1e-39 168.7 152 61.2
QL05p014501 Quercus lobata HOM05D001729 ORTHO05D001155 2.0e-20 104.8 504 25.6
Sc19g0000590 Simmondsia chinensis HOM05D001729 ORTHO05D001155 2.9e-16 90.9 423 24.1
QL05p008212 Quercus lobata HOM05D001729 ORTHO05D001155 6.1e-14 83.2 377 25.7
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 5.2e-13 80.1 359 25.6
QL07p036320 Quercus lobata HOM05D001729 ORTHO05D001155 5.2e-13 80.1 382 25.7
QL05p012608 Quercus lobata HOM05D001729 ORTHO05D001155 6.7e-13 79.7 346 24.6
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 8.8e-13 79.3 329 28.6
Atru.chr9.1050 Acer truncatum HOM05D006807 ORTHO05D008528 5.7e-12 76.6 329 26.1
Potri.011G004800 Populus trichocarpa HOM05D001729 ORTHO05D001155 7.4e-12 76.3 454 22.7
QL07p019801 Quercus lobata HOM05D001729 ORTHO05D001155 7.4e-12 76.3 345 27.5
QL05p012589 Quercus lobata HOM05D001729 ORTHO05D001155 9.7e-12 75.9 429 24.5
AUR62035625 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.3e-11 75.5 319 27.6
QL02p054283 Quercus lobata HOM05D001729 ORTHO05D001155 1.7e-11 75.1 344 27.9
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 1.7e-11 75.1 307 26.7
QL07p036156 Quercus lobata HOM05D001729 ORTHO05D001155 2.8e-11 74.3 353 24.9
CSS0020895 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 3.7e-11 73.9 238 27.7
CSS0028413 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 3.7e-11 73.9 238 27.7
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 3.7e-11 73.9 384 25.8
Sabra11G0003700 Salix brachista HOM05D001729 ORTHO05D001155 3.7e-11 73.9 452 23.2
DCAR_004585 Daucus carota HOM05D001729 ORTHO05D001155 8.2e-11 72.8 414 25.4
QL05p052800 Quercus lobata HOM05D001729 ORTHO05D001155 1.1e-10 72.4 373 24.7
QL08p043319 Quercus lobata HOM05D001729 ORTHO05D001155 1.1e-10 72.4 345 23.2
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 1.1e-10 72.4 359 24.8
FAN08G2539 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-10 71.6 338 23.7
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 2.4e-10 71.2 488 24.4
QL01p006048 Quercus lobata HOM05D001729 ORTHO05D001155 2.4e-10 71.2 374 24.1
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 5.3e-10 70.1 312 23.1
Lsat_1_v5_gn_5_38300 Lactuca sativa HOM05D008898 ORTHO05D001155 9.1e-10 69.3 469 23.5
FvH4_4g31310 Fragaria vesca HOM05D001729 ORTHO05D001155 2.6e-09 67.8 321 26.5
CARHR205550 Cardamine hirsuta HOM05D000664 ORTHO05D000491 5.9e-09 66.6 244 27.0
QL05p009518 Quercus lobata HOM05D001729 ORTHO05D001155 5.9e-09 66.6 313 26.2
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 1.0e-08 65.9 253 27.3
QL05p012667 Quercus lobata HOM05D001729 ORTHO05D001155 3.8e-08 63.9 326 22.4
TWI36G0117 Tripterygium wilfordii HOM05D001729 ORTHO05D001155 3.8e-08 63.9 265 24.5
Duzib147G0011 Durio zibethinus HOM05D001729 ORTHO05D001155 5.0e-08 63.5 272 26.1
COL.COLO4_30694 Corchorus olitorius HOM05D001729 ORTHO05D001155 6.5e-08 63.2 202 29.2
QL05p074214 Quercus lobata HOM05D001729 ORTHO05D001155 6.5e-08 63.2 349 26.6
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-07 62.4 314 25.5
SGA_v2.0_scaffold1G00575 Striga asiatica HOM05D001729 ORTHO05D001155 1.5e-07 62.0 374 24.1
FAN20G1095 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-07 61.6 267 27.7
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 2.5e-07 61.2 250 28.0
RcHm_v2.0_Chr5g0021011 Rosa chinensis HOM05D001729 ORTHO05D001155 2.5e-07 61.2 256 26.2
Sabra09G0102700 Salix brachista HOM05D001729 ORTHO05D001155 3.2e-07 60.8 322 25.5
Duzib192G1051 Durio zibethinus HOM05D001729 ORTHO05D001155 4.2e-07 60.5 249 24.9
FAN02G0583 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.2e-07 60.5 288 26.4
FAN09G4239 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.2e-07 60.5 287 26.1
FvH4_6g46240 Fragaria vesca HOM05D001729 ORTHO05D001155 7.2e-07 59.7 224 26.8
FvH4_6g46241 Fragaria vesca HOM05D001729 ORTHO05D001155 7.2e-07 59.7 153 32.0
FAN05G3901 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-06 58.9 306 25.5
RcHm_v2.0_Chr2g0089331 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-06 58.9 280 25.7
Prupe.1G510700 Prunus persica HOM05D001729 ORTHO05D001155 1.6e-06 58.5 259 24.7
Aqoxy4G02867 Aquilegia oxysepala HOM05D000664 ORTHO05D010440 2.1e-06 58.2 306 25.5
FAN05G4264 Fragaria x ananassa HOM05D001526 ORTHO05D001417 2.1e-06 58.2 249 26.5
RcHm_v2.0_Chr3g0449911 Rosa chinensis HOM05D001729 ORTHO05D001155 2.1e-06 58.2 443 21.7
Migut.F01254 Erythranthe guttata HOM05D000664 ORTHO05D000491 2.7e-06 57.8 231 26.4
FAN14G3624 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.6e-06 57.4 298 25.5
FAN16G0249 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.7e-06 57.0 266 27.1
TAR626G1986 Trochodendron aralioides HOM05D000664 ORTHO05D000491 4.7e-06 57.0 231 27.7
CAN.G467.4 Capsicum annuum HOM05D000664 ORTHO05D000491 6.1e-06 56.6 283 25.4
FvH4_6g03380 Fragaria vesca HOM05D001729 ORTHO05D001155 6.1e-06 56.6 298 25.2
FAN24G2446 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-06 56.6 155 31.6
Prupe.1G509300 Prunus persica HOM05D001729 ORTHO05D001155 8.0e-06 56.2 268 25.4


User provided reference genes

Program Settings