Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 3.1e-133 478.4 233 100.0
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 1.3e-126 456.4 233 96.1
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 1.8e-120 436.0 228 91.7
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.3e-118 429.9 234 91.0
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 8.3e-118 427.2 230 90.4
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 1.6e-116 422.9 227 90.7
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 3.8e-115 418.3 227 89.4
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 1.9e-114 416.0 227 89.4
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 1.9e-114 416.0 227 89.4
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 2.5e-114 415.6 227 89.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 2.5e-114 415.6 227 89.0
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 1.6e-113 412.9 227 88.5
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 1.1e-106 390.2 231 84.0
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 1.5e-103 379.8 225 81.3
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 1.7e-102 376.3 225 80.4
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 4.9e-102 374.8 225 80.4
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.2e-101 370.5 225 78.2
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 1.2e-100 370.2 226 79.6
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 2.0e-100 369.4 228 79.4
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.6e-100 368.2 225 77.3
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 5.9e-100 367.9 225 79.1
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 5.9e-100 367.9 228 79.8
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 2.3e-99 365.9 225 76.9
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.3e-99 365.9 225 77.3
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.3e-99 365.9 225 77.3
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 3.3e-98 362.1 225 78.2
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 3.3e-98 362.1 225 77.3
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 1.6e-97 359.8 225 79.6
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.6e-97 359.8 228 76.3
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 1.6e-97 359.8 225 78.2
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 2.1e-97 359.4 225 77.8
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 3.6e-97 358.6 225 78.2
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 4.7e-97 358.2 225 76.9
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 6.2e-97 357.8 225 79.1
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.0e-96 357.1 225 77.3
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 3.1e-96 355.5 226 75.7
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 5.2e-96 354.8 227 75.3
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 6.8e-96 354.4 225 76.4
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 8.9e-96 354.0 225 78.2
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 2.0e-95 352.8 225 75.6
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 4.4e-95 351.7 226 75.7
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 5.8e-95 351.3 223 77.1
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 9.8e-95 350.5 225 74.2
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 9.8e-95 350.5 225 74.2
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.3e-94 350.1 251 70.1
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 2.2e-94 349.4 226 76.1
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 3.7e-94 348.6 225 75.6
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 6.4e-94 347.8 225 75.6
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 6.4e-94 347.8 227 74.9
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 8.3e-94 347.4 225 73.8
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 1.4e-93 346.7 232 72.4
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 1.9e-93 346.3 225 74.7
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 1.9e-93 346.3 225 75.6
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 4.1e-93 345.1 225 73.3
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 5.4e-93 344.7 229 74.2
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 1.2e-92 343.6 233 70.8
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.6e-92 343.2 225 73.8
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 2.0e-92 342.8 229 73.8
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 4.6e-92 341.7 225 72.9
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 6.0e-92 341.3 230 73.9
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 6.0e-92 341.3 227 74.4
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 7.8e-92 340.9 236 71.6
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.7e-91 339.7 225 72.4
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 1.7e-91 339.7 226 74.3
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 3.0e-91 339.0 225 73.3
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 3.9e-91 338.6 225 74.2
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 8.6e-91 337.4 225 72.4
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 8.6e-91 337.4 229 71.6
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.5e-90 336.7 233 71.2
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 2.5e-90 335.9 223 71.7
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 2.1e-89 332.8 261 65.5
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 3.6e-89 332.0 227 71.8
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 3.6e-89 332.0 225 70.7
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 3.6e-89 332.0 230 71.3
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 8.1e-89 330.9 248 67.7
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 8.1e-89 330.9 246 66.7
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 1.8e-88 329.7 231 71.4
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 4.0e-88 328.6 209 76.6
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 6.8e-88 327.8 238 68.1
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 3.4e-87 325.5 208 74.5
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 3.4e-87 325.5 211 74.9
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 5.8e-87 324.7 216 75.0
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 1.4e-85 320.1 210 72.4
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 7.8e-84 314.3 225 71.1
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 1.3e-83 313.5 209 71.3
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 5.1e-83 311.6 230 67.8
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 6.6e-83 311.2 225 71.1
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 1.1e-82 310.5 211 72.0
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 5.6e-82 308.1 208 71.6
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.6e-81 306.6 222 68.0
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 1.1e-80 303.9 235 66.0
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 5.8e-79 298.1 230 66.1
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.1e-77 293.9 239 63.2
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 1.7e-75 286.6 153 87.6
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 2.1e-73 279.6 212 69.3
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.2e-71 273.9 176 72.2
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 2.0e-71 273.1 176 74.4
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 1.3e-70 270.4 175 69.7
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 3.2e-69 265.8 226 59.7
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 9.3e-69 264.2 236 59.3
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 1.5e-66 256.9 226 59.3
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 4.8e-65 251.9 147 80.3
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 2.4e-64 249.6 226 58.4
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 5.8e-63 245.0 331 44.1
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 2.9e-62 242.7 211 61.1
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 2.7e-60 236.1 158 72.8
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 6.0e-60 235.0 225 56.4
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 7.9e-60 234.6 164 63.4
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 4.3e-58 228.8 145 79.3
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 1.6e-57 226.9 123 84.6
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 1.8e-51 206.8 132 66.7
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.0e-43 181.0 174 52.3
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 4.8e-41 172.2 134 59.7
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 6.9e-40 168.3 177 47.5
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 3.8e-30 136.0 63 98.4
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.0e-26 123.6 86 65.1
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.7e-25 120.6 63 81.0
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.2e-25 120.2 68 86.8
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 2.0e-23 113.6 144 45.8
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.7e-20 103.2 90 57.8
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 8.0e-20 101.7 118 49.2


User provided reference genes

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