Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G27650 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 1.4e-251 872.5 443 100.0
Sp2g19840 Schrenkiella parvula HOM05D004086 ORTHO05D004641 6.3e-159 564.7 475 65.3
SpUn0021_0010 Schrenkiella parvula HOM05D004086 ORTHO05D004641 6.3e-159 564.7 475 65.3
Thhalv10003751m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 3.6e-154 548.9 467 64.7
Thhalv10023969m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 7.0e-150 534.6 465 65.2
A06p38290 Brassica napus HOM05D004086 ORTHO05D004641 4.0e-145 518.8 477 62.7
BolC7t44527H Brassica oleracea HOM05D004086 ORTHO05D004641 6.8e-145 518.1 480 60.8
BraA06t26744Z Brassica rapa HOM05D004086 ORTHO05D004641 1.2e-144 517.3 476 62.6
AT5G49530 Arabidopsis thaliana HOM05D004086 ORTHO05D004641 2.6e-144 516.2 476 62.4
C07p39950 Brassica napus HOM05D004086 ORTHO05D004641 1.4e-142 510.4 472 61.2
Carub.0008s0941 Capsella rubella HOM05D004086 ORTHO05D004641 1.1e-139 500.7 479 58.5
CARHR287960 Cardamine hirsuta HOM05D004086 ORTHO05D004641 1.8e-134 483.4 470 58.5
AL8G23320 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 5.9e-133 478.4 462 60.0
THA.LOC104819797 Tarenaya hassleriana HOM05D004086 ORTHO05D004641 7.6e-112 408.3 463 50.1
Aa31LG11G8330 Aethionema arabicum HOM05D004086 ORTHO05D004641 1.2e-109 401.0 479 49.7
TWI09G1017 Tripterygium wilfordii HOM05D004086 ORTHO05D004641 1.8e-84 317.4 494 39.9
CARHR050710 Cardamine hirsuta HOM05D004086 ORTHO05D004641 1.9e-83 313.9 203 77.3
CANSAT01G2856 Cannabis sativa HOM05D004086 ORTHO05D004641 2.5e-83 313.5 489 41.7
CiPaw.02G015600 Carya illinoinensis HOM05D004086 ORTHO05D004641 2.5e-83 313.5 482 41.7
Psat2g160960 Pisum sativum HOM05D004086 ORTHO05D004641 2.6e-80 303.5 470 41.7
GSVIVG01018995001 Vitis vinifera HOM05D004086 ORTHO05D004641 2.6e-80 303.5 478 40.2
Ciclev10025048m.g Citrus clementina HOM05D004086 ORTHO05D004641 1.0e-79 301.6 444 41.7
Duzib264G0994 Durio zibethinus HOM05D004086 ORTHO05D004641 1.3e-79 301.2 463 41.0
Potri.007G028600 Populus trichocarpa HOM05D004086 ORTHO05D004641 1.2e-77 294.7 478 38.9
Thecc.01G039100 Theobroma cacao HOM05D004086 ORTHO05D004641 2.1e-77 293.9 490 39.6
Gohir.A11G185700 Gossypium hirsutum HOM05D004086 ORTHO05D004641 8.7e-76 288.5 449 42.3
Gorai.007G205200 Gossypium raimondii HOM05D004086 ORTHO05D004641 2.5e-75 287.0 411 42.8
Atru.chr3.545 Acer truncatum HOM05D004086 ORTHO05D004641 7.4e-75 285.4 395 43.0
Gohir.D11G192200 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.3e-74 284.6 411 42.6
QL06p045466 Quercus lobata HOM05D004086 ORTHO05D004641 1.3e-74 284.6 491 38.5
ClCG07G009030 Citrullus lanatus HOM05D004086 ORTHO05D004641 3.7e-74 283.1 483 38.1
MELO3C017544.2 Cucumis melo HOM05D004086 ORTHO05D004641 4.8e-74 282.7 487 38.0
Gohir.D11G227980 Gossypium hirsutum HOM05D004086 ORTHO05D004641 4.8e-74 282.7 411 42.6
DCAR_025930 Daucus carota HOM05D004086 ORTHO05D004641 1.1e-73 281.6 478 37.4
CsaV3_4G005180 Cucumis sativus L. HOM05D004086 ORTHO05D004641 5.8e-72 275.8 494 36.2
Sed0023254 Sechium edule HOM05D004086 ORTHO05D004641 1.0e-71 275.0 416 39.4
Hma1.2p1_0400F.1_g144650 Hydrangea macrophylla HOM05D004086 ORTHO05D004641 2.9e-71 273.5 484 37.6
TAR628G1622 Trochodendron aralioides HOM05D004086 ORTHO05D004641 5.0e-71 272.7 468 38.0
MSTRG.23544 Avicennia marina HOM05D004086 ORTHO05D004641 1.4e-70 271.2 459 39.0
Lj5A533G14 Lonicera japonica HOM05D004086 ORTHO05D004641 2.5e-70 270.4 436 40.4
Sabra07G0024800 Salix brachista HOM05D004086 ORTHO05D004641 3.2e-70 270.0 504 36.3
Manes.07G068600 Manihot esculenta HOM05D004086 ORTHO05D004641 1.6e-69 267.7 360 43.6
TPR.G18816 Trifolium pratense HOM05D004086 ORTHO05D004641 1.6e-69 267.7 481 37.4
FAN19G3131 Fragaria x ananassa HOM05D004086 ORTHO05D004641 3.5e-69 266.5 452 39.4
Actinidia36545 Actinidia chinensis HOM05D004086 ORTHO05D004641 6.1e-69 265.8 466 39.5
Eucgr.H01260 Eucalyptus grandis HOM05D004086 ORTHO05D004641 7.9e-69 265.4 360 41.7
Cc07_g09240 Coffea canephora HOM05D004086 ORTHO05D004641 1.8e-68 264.2 358 43.6
FAN26G0470 Fragaria x ananassa HOM05D004086 ORTHO05D004641 3.0e-68 263.5 446 39.2
RcHm_v2.0_Chr2g0102021 Rosa chinensis HOM05D004086 ORTHO05D004641 3.0e-68 263.5 441 39.0
MD02G1151400 Malus domestica HOM05D004086 ORTHO05D004641 1.5e-67 261.2 518 35.7
VMungo1215G0116 Vigna mungo HOM05D004086 ORTHO05D004641 1.5e-67 261.2 501 36.9
FAN23G2825 Fragaria x ananassa HOM05D004086 ORTHO05D004641 2.5e-67 260.4 477 37.7
FvH4_1g13700 Fragaria vesca HOM05D004086 ORTHO05D004641 3.3e-67 260.0 454 38.3
vmacro07910 Vaccinium macrocarpon HOM05D004086 ORTHO05D004641 3.3e-67 260.0 489 37.0
Gohir.D11G227900 Gossypium hirsutum HOM05D004086 ORTHO05D004641 7.4e-67 258.8 409 40.1
Lalb_Chr20g0123501 Lupinus albus HOM05D004086 ORTHO05D004641 7.4e-67 258.8 356 43.8
Glyma.11G009900 Glycine max HOM05D004086 ORTHO05D004641 3.7e-66 256.5 496 37.3
FAN28G1508 Fragaria x ananassa HOM05D004086 ORTHO05D004641 4.8e-66 256.1 476 37.8
Medtr5g026040 Medicago truncatula HOM05D004086 ORTHO05D004641 1.1e-65 255.0 475 36.4
Medtr5g019810 Medicago truncatula HOM05D004086 ORTHO05D004641 3.1e-65 253.4 482 36.9
Ca_00390_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 6.9e-65 252.3 501 36.7
Prupe.7G151600 Prunus persica HOM05D004086 ORTHO05D004641 1.5e-64 251.1 489 37.2
COL.COLO4_22111 Corchorus olitorius HOM05D004086 ORTHO05D004641 4.5e-64 249.6 347 43.5
COL.COLO4_14865 Corchorus olitorius HOM05D004086 ORTHO05D004641 1.3e-63 248.1 448 39.5
Ah.15g091580 Amaranthus hybridus HOM05D004086 ORTHO05D004641 2.9e-63 246.9 476 35.9
Oeu053005.1 Olea europaea HOM05D004086 ORTHO05D004641 2.9e-63 246.9 469 37.1
DCAR_023357 Daucus carota HOM05D004086 ORTHO05D004641 3.2e-62 243.4 483 34.8
CSS0022456 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 1.2e-61 241.5 483 36.2
CSS0048181 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 1.2e-61 241.5 483 36.2
Hund05506 Selenicereus undatus HOM05D004086 ORTHO05D004641 2.7e-61 240.4 365 39.2
TPR.G28496 Trifolium pratense HOM05D004086 ORTHO05D004641 1.4e-60 238.0 451 35.7
arahy.Tifrunner.gnm1.ann1.4T6GLU Arachis hypogaea HOM05D004086 ORTHO05D004641 1.8e-60 237.7 515 33.4
EL10Ac7g17738 Beta vulgaris HOM05D004086 ORTHO05D004641 2.3e-60 237.3 450 34.4
Ah.15g091670 Amaranthus hybridus HOM05D004086 ORTHO05D004641 5.1e-60 236.1 356 40.7
arahy.Tifrunner.gnm1.ann1.FS5W7P Arachis hypogaea HOM05D004086 ORTHO05D004641 5.1e-60 236.1 462 35.3
Phvul.002G040400 Phaseolus vulgaris HOM05D004086 ORTHO05D004641 6.7e-60 235.7 498 35.5
Lj5g0019705 Lotus japonicus HOM05D004086 ORTHO05D004641 8.8e-60 235.3 472 35.0
Dinv39963 Davidia involucrata HOM05D004086 ORTHO05D004641 1.5e-59 234.6 482 35.1
ECA238G3830 Erigeron canadensis HOM05D004086 ORTHO05D004641 3.3e-59 233.4 446 37.2
Nn5g29538 Nelumbo nucifera HOM05D004086 ORTHO05D004641 2.8e-58 230.3 378 39.2
HanXRQChr09g0262111 Helianthus annuus HOM05D004086 ORTHO05D004641 3.7e-58 229.9 375 37.6
PSO675G7346 Papaver somniferum HOM05D004086 ORTHO05D004641 1.1e-57 228.4 348 42.2
Migut.H00181 Erythranthe guttata HOM05D004086 ORTHO05D004641 1.4e-57 228.0 492 36.0
Lsat_1_v5_gn_4_150860 Lactuca sativa HOM05D004086 ORTHO05D004641 5.3e-57 226.1 466 35.0
ECA232G4057 Erigeron canadensis HOM05D004086 ORTHO05D001499 1.2e-56 224.9 477 34.2
AL253U10010 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 3.4e-56 223.4 247 57.9
Peaxi162Scf00515g00225 Petunia axillaris HOM05D004086 ORTHO05D004641 3.4e-56 223.4 478 36.4
Aqoxy6G01048 Aquilegia oxysepala HOM05D004086 ORTHO05D004641 4.5e-56 223.0 481 33.1
CAN.G358.119 Capsicum annuum HOM05D004086 ORTHO05D004641 8.5e-55 218.8 489 34.2
Actinidia12113 Actinidia chinensis HOM05D004086 ORTHO05D004641 1.4e-54 218.0 465 35.7
CAN.G1058.29 Capsicum annuum HOM05D004086 ORTHO05D004641 3.2e-54 216.9 467 35.3
Nitab4.5_0008457g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 4.2e-54 216.5 493 34.7
PGSC0003DMG400004762 Solanum tuberosum HOM05D004086 ORTHO05D004641 4.2e-54 216.5 467 34.9
Nitab4.5_0010593g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 9.4e-54 215.3 386 37.0
Sopen08g027080 Solanum pennellii HOM05D004086 ORTHO05D004641 1.2e-53 214.9 478 34.7
Solyc08g078600.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 1.6e-53 214.5 478 34.5
BcaC03g17736 Brassica carinata HOM05D004086 ORTHO05D004641 5.1e-52 209.5 283 48.1
A02p38220 Brassica napus HOM05D004086 ORTHO05D004641 5.1e-52 209.5 300 45.3
PSO541G3560 Papaver somniferum HOM05D004086 ORTHO05D004641 9.7e-51 205.3 469 34.5
AUR62025406 Chenopodium quinoa HOM05D004086 ORTHO05D004641 4.8e-50 203.0 462 34.0
AUR62008836 Chenopodium quinoa HOM05D004086 ORTHO05D004641 6.3e-50 202.6 458 33.4
Solyc02g085560.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 3.5e-48 196.8 479 33.0
HPP92_026151 Vanilla planifolia HOM05D004086 ORTHO05D004641 1.3e-47 194.9 361 36.6
Sopen02g030230 Solanum pennellii HOM05D004086 ORTHO05D004641 2.2e-47 194.1 472 32.8
HPP92_015988 Vanilla planifolia HOM05D004086 ORTHO05D004641 4.7e-45 186.4 357 35.6
Rhsim03G0093700 Rhododendron simsii HOM05D004086 ORTHO05D004641 6.7e-44 182.6 489 32.7
FvH4_2g10200 Fragaria vesca HOM05D004086 ORTHO05D004641 2.0e-43 181.0 447 30.6
Nitab4.5_0004445g0020 Nicotiana tabacum HOM05D004086 ORTHO05D004641 2.8e-42 177.2 320 36.2
unitig_52.g17585 Utricularia gibba HOM05D004086 ORTHO05D004641 8.2e-42 175.6 361 32.4
Mapoly0113s0019 Marchantia polymorpha HOM05D004086 ORTHO05D004641 3.1e-41 173.7 386 32.1
ATR0064G058 Amborella trichopoda HOM05D004086 ORTHO05D004641 5.9e-40 169.5 474 29.7
SMO203G0104 Selaginella moellendorffii HOM05D004086 ORTHO05D004641 1.5e-38 164.9 376 32.2
CBR_g22032 Chara braunii HOM05D004086 ORTHO05D004641 7.2e-38 162.5 381 32.0
C02p57460 Brassica napus HOM05D004086 ORTHO05D004641 1.2e-37 161.8 283 41.3
AagrBONN_evm.TU.Sc2ySwM_344.3508 Anthoceros agrestis HOM05D004086 ORTHO05D004641 2.1e-37 161.0 385 30.4
BcaB07g34160 Brassica carinata HOM05D004086 ORTHO05D004641 1.0e-36 158.7 113 69.9
CDE05G2435 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 1.0e-36 158.7 198 44.4
Pp3c2_15450 Physcomitrium patens HOM05D004086 ORTHO05D004641 1.5e-35 154.8 468 29.5
CBR_g50911 Chara braunii HOM05D004086 ORTHO05D004641 2.6e-35 154.1 376 31.4
CBR_g50913 Chara braunii HOM05D004086 ORTHO05D004641 2.6e-35 154.1 376 31.4
MD15G1266000 Malus domestica HOM05D004086 ORTHO05D004641 9.8e-35 152.1 368 32.9
Haze_15127 Corylus avellana HOM05D004086 ORTHO05D004641 3.1e-33 147.1 271 37.6
Nitab4.5_0001279g0090 Nicotiana tabacum HOM05D004086 ORTHO05D004641 9.1e-33 145.6 277 35.4
Haze_02099 Corylus avellana HOM05D004086 ORTHO05D004641 5.9e-32 142.9 486 30.5
Cpa.g.sc353.3 Carica papaya HOM05D004086 ORTHO05D004641 1.5e-30 138.3 138 50.0
Haze_02100 Corylus avellana HOM05D004086 ORTHO05D004641 9.4e-30 135.6 174 45.4
CDE10G1264 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 1.6e-29 134.8 447 28.2
FAN24G1278 Fragaria x ananassa HOM05D004086 ORTHO05D004641 2.7e-29 134.0 421 28.3
Sc17g0002710 Simmondsia chinensis HOM05D004086 ORTHO05D004641 6.1e-29 132.9 147 46.3
Lsat_1_v5_gn_4_150881 Lactuca sativa HOM05D004086 ORTHO05D004641 9.8e-27 125.6 388 29.4
Ca_29955_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 1.8e-25 121.3 286 30.8
Zm00001eb269010 Zea mays HOM05D004086 ORTHO05D004641 5.4e-25 119.8 199 38.7
Cpa.g.sc353.1 Carica papaya HOM05D004086 ORTHO05D004641 1.7e-23 114.8 231 37.7
CDE10G0302 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 3.0e-20 104.0 250 32.0
PSO017G0414 Papaver somniferum HOM05D004086 ORTHO05D004641 2.6e-19 100.9 400 27.0
CARHR050700 Cardamine hirsuta HOM05D004086 ORTHO05D004641 3.7e-18 97.1 69 75.4
CDE05G1436 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 4.9e-18 96.7 100 47.0
PGSC0003DMG400012686 Solanum tuberosum HOM05D004086 ORTHO05D004641 4.9e-18 96.7 188 34.0
Haze_15116 Corylus avellana HOM05D004086 ORTHO05D004641 7.0e-17 92.8 231 32.5
AUR62025404 Chenopodium quinoa HOM05D000200 ORTHO05D000262 3.9e-15 87.0 122 36.9
SEGI_33702 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 1.8e-12 78.2 110 37.3
BolC2t11821H Brassica oleracea HOM05D004086 ORTHO05D004641 9.8e-11 72.4 143 37.8
Ah.15g091620 Amaranthus hybridus HOM05D004086 ORTHO05D004641 1.7e-10 71.6 85 45.9
Zm00001eb269020 Zea mays HOM05D004086 ORTHO05D004641 2.2e-10 71.2 141 33.3
Oeu053017.4 Olea europaea HOM05D004086 ORTHO05D004641 3.7e-10 70.5 106 40.6
SHI06749 Sapria himalayana HOM05D004086 ORTHO05D004641 3.7e-10 70.5 84 46.4
SEGI_29880 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 4.9e-10 70.1 81 44.4
SHI06750 Sapria himalayana HOM05D004086 ORTHO05D004641 1.9e-09 68.2 111 37.8
MELO3C034917.2 Cucumis melo HOM05D004086 ORTHO05D004641 3.2e-09 67.4 103 37.9
Glyma.01G232951 Glycine max HOM05D001514 ORTHO05D002956 7.0e-09 66.2 194 26.8
Gohir.A11G236200 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.1e-06 58.9 84 41.7
Cre10.g454650 Chlamydomonas reinhardtii HOM05D004086 ORTHO05D004641 2.5e-06 57.8 119 31.9


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