Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 4.3e-180 634.8 386 100.0
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 8.5e-168 594.0 390 92.1
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 2.3e-157 559.3 392 88.0
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 2.3e-141 506.1 394 82.5
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 8.2e-139 497.7 394 73.6
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 2.7e-134 482.6 393 77.1
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 2.8e-131 472.6 394 70.1
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 6.5e-128 461.5 394 71.8
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 7.2e-127 458.0 394 72.3
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 9.5e-119 431.0 379 71.0
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 6.1e-118 428.3 390 65.6
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 6.1e-118 428.3 390 65.6
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 1.8e-117 426.8 390 65.4
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 2.0e-116 423.3 390 64.9
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 7.8e-113 411.4 361 70.4
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 7.1e-98 361.7 422 57.3
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 6.2e-86 322.0 393 55.2
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 4.2e-82 309.3 300 68.7
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 1.1e-74 284.6 395 49.1
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 2.4e-37 160.6 360 38.1
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 3.1e-37 160.2 400 34.8
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 9.1e-37 158.7 401 35.7
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 1.5e-36 157.9 341 36.7
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 5.9e-36 156.0 421 34.9
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 5.0e-35 152.9 334 36.2
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 3.2e-34 150.2 343 37.0
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 5.5e-34 149.4 378 34.9
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 9.4e-34 148.7 439 32.1
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 6.1e-33 146.0 378 34.1
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 2.3e-32 144.1 387 34.6
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 3.0e-32 143.7 353 33.7
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 3.0e-32 143.7 316 36.4
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 3.0e-32 143.7 385 32.7
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 2.6e-31 140.6 386 34.2
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 4.4e-31 139.8 331 36.3
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 7.4e-31 139.0 344 33.4
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 1.7e-30 137.9 372 33.9
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 1.4e-29 134.8 335 34.9
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 1.8e-29 134.4 458 30.8
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 2.4e-29 134.0 421 30.2
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 5.3e-29 132.9 441 31.1
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 5.3e-29 132.9 265 37.0
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 7.0e-29 132.5 321 35.8
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 2.0e-28 131.0 414 34.8
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 2.6e-28 130.6 417 36.5
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 1.5e-26 124.8 386 33.7
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 6.1e-25 119.4 428 34.8
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 3.0e-24 117.1 455 27.7
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 4.0e-24 116.7 279 34.4
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 2.0e-23 114.4 448 27.9
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 9.7e-23 112.1 409 30.8
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 1.3e-22 111.7 422 31.8
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 3.7e-22 110.2 429 29.4
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 4.8e-22 109.8 421 30.6
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 6.3e-22 109.4 400 30.2
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 3.1e-21 107.1 297 33.7
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 4.1e-21 106.7 345 32.8
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 4.1e-21 106.7 351 32.5
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 9.1e-21 105.5 320 34.1
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 3.5e-20 103.6 386 29.0
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 1.0e-19 102.1 487 27.7
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 5.0e-19 99.8 368 28.8
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 5.0e-19 99.8 400 29.5
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 8.5e-19 99.0 403 30.3
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 3.2e-18 97.1 389 28.5
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 4.2e-18 96.7 483 27.7
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 3.6e-17 93.6 365 29.6
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 4.7e-17 93.2 175 37.7
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 4.7e-17 93.2 175 36.6
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 8.0e-17 92.4 464 28.7
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 1.4e-16 91.7 493 26.8
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 1.8e-16 91.3 373 29.5
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 3.0e-16 90.5 419 27.0
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 6.8e-16 89.4 221 33.9
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 9.8e-15 85.5 378 28.6
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 4.8e-14 83.2 357 28.9
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 4.8e-14 83.2 298 28.9
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 1.1e-13 82.0 429 25.6
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 1.1e-13 82.0 355 30.1
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 1.1e-13 82.0 387 25.6
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 3.1e-13 80.5 247 33.6
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 5.4e-13 79.7 362 29.6
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 7.0e-13 79.3 307 27.0
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 9.1e-13 79.0 180 36.1
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 5.9e-12 76.3 554 24.7
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 5.9e-12 76.3 435 29.4
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 7.7e-12 75.9 293 30.7
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 1.7e-11 74.7 154 40.3
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 2.3e-11 74.3 169 39.1
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 3.8e-11 73.6 432 26.4
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 6.6e-11 72.8 175 34.9
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 8.6e-11 72.4 333 27.9
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 8.6e-11 72.4 350 28.6
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 1.5e-10 71.6 338 26.0
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 2.5e-10 70.9 387 26.9
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 4.2e-10 70.1 352 28.4
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 5.5e-10 69.7 221 30.8
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 7.2e-10 69.3 170 35.3
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.6e-09 68.2 221 29.4
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 2.1e-09 67.8 165 38.2
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 2.8e-09 67.4 104 37.5
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 4.7e-09 66.6 165 37.6
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 4.7e-09 66.6 164 40.2
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 3.0e-08 63.9 456 23.7
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 4.0e-08 63.5 510 24.9
FAN16G1466 Fragaria x ananassa HOM05D006297 ORTHO05D007873 8.9e-08 62.4 433 24.0
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 8.9e-08 62.4 100 40.0
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 1.2e-07 62.0 136 33.8
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 1.5e-07 61.6 368 24.5
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 2.0e-07 61.2 123 33.3
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 3.4e-07 60.5 119 39.5
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 5.7e-07 59.7 108 35.2
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.3e-06 58.5 129 32.6
HPP92_015541 Vanilla planifolia HOM05D043147 ORTHO05D007873 2.2e-06 57.8 302 25.8
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 2.8e-06 57.4 135 35.6
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 6.3e-06 56.2 121 33.1
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 8.3e-06 55.8 125 36.8
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 8.3e-06 55.8 125 36.8


User provided reference genes

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