Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G23820 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 3.6e-61 238.0 118 100.0
AT3G45243 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 2.9e-50 201.8 118 83.9
AL5G23830 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 7.3e-38 160.6 116 65.5
Carub.0005s1104 Capsella rubella HOM05D008416 ORTHO05D010671 4.0e-36 154.8 119 64.7
AT3G45245 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 3.4e-35 151.8 116 60.3
Carub.0005s1105 Capsella rubella HOM05D008416 ORTHO05D010671 1.2e-32 143.3 117 57.3
Thhalv10003095m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 2.1e-32 142.5 117 56.4
CARHR150670 Cardamine hirsuta HOM05D008416 ORTHO05D010671 8.4e-26 120.6 89 60.7
Carub.0005s1109 Capsella rubella HOM05D008416 ORTHO05D010671 3.5e-24 115.2 116 50.0
AT3G45248 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 4.3e-22 108.2 114 48.2
Carub.0005s1108 Capsella rubella HOM05D008416 ORTHO05D010671 1.6e-21 106.3 118 45.8
AT3G45275 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 2.8e-21 105.5 114 47.4
BraA06t23586Z Brassica rapa HOM05D008416 ORTHO05D010671 1.4e-20 103.2 113 43.4
AT2G25312 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.8e-20 102.8 114 46.5
AT3G45285 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.8e-20 102.8 114 47.4
AL7G52470 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 3.1e-20 102.1 114 43.0
BolC6t35553H Brassica oleracea HOM05D008416 ORTHO05D010671 3.1e-20 102.1 113 42.5
BolC6t35554H Brassica oleracea HOM05D008416 ORTHO05D010671 3.1e-20 102.1 113 42.5
Sp2g01720 Schrenkiella parvula HOM05D008416 ORTHO05D010671 5.3e-20 101.3 113 45.1
C06p04270 Brassica napus HOM05D008416 ORTHO05D010671 6.9e-20 100.9 113 42.5
BolC6t35555H Brassica oleracea HOM05D008416 ORTHO05D010671 6.9e-20 100.9 113 42.5
BolC6t35556H Brassica oleracea HOM05D008416 ORTHO05D010671 6.9e-20 100.9 113 42.5
BolC6t35558H Brassica oleracea HOM05D008416 ORTHO05D010671 6.9e-20 100.9 113 42.5
AL5G23840 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 9.0e-20 100.5 104 50.0
BolC6t35552H Brassica oleracea HOM05D008416 ORTHO05D010671 1.2e-19 100.1 113 43.4
BolC6t35557H Brassica oleracea HOM05D008416 ORTHO05D010671 2.0e-19 99.4 112 42.9
BraA06t23587Z Brassica rapa HOM05D008416 ORTHO05D010671 2.6e-19 99.0 106 44.3
C06p04280 Brassica napus HOM05D008416 ORTHO05D010671 3.4e-19 98.6 113 41.6
BolC6t35559H Brassica oleracea HOM05D008416 ORTHO05D010671 3.4e-19 98.6 113 41.6
CARHR150660 Cardamine hirsuta HOM05D008416 ORTHO05D010671 4.5e-19 98.2 90 57.8
C09p35150 Brassica napus HOM05D008416 ORTHO05D010671 7.6e-19 97.4 108 43.5
BolC9t56361H Brassica oleracea HOM05D008416 ORTHO05D010671 7.6e-19 97.4 108 43.5
BraA06t23588Z Brassica rapa HOM05D008416 ORTHO05D010671 9.9e-19 97.1 113 40.7
AT3G44428 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.7e-18 96.3 114 44.7
CARHR150620 Cardamine hirsuta HOM05D008416 ORTHO05D010671 1.7e-18 96.3 107 44.9
A09p27720 Brassica napus HOM05D008416 ORTHO05D010671 2.2e-18 95.9 111 40.5
BraA09t38342Z Brassica rapa HOM05D008416 ORTHO05D010671 2.2e-18 95.9 111 40.5
Thhalv10003106m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 2.9e-18 95.5 113 38.1
BolC3t14966H Brassica oleracea HOM05D008416 ORTHO05D010671 6.4e-18 94.4 113 38.9
BolC3t14967H Brassica oleracea HOM05D008416 ORTHO05D010671 8.4e-18 94.0 113 38.9
Aa31LG4G14590 Aethionema arabicum HOM05D008416 ORTHO05D010671 1.1e-17 93.6 84 50.0
BcaC02g10145 Brassica carinata HOM05D008416 ORTHO05D010671 1.1e-17 93.6 106 43.4
Aa31LG4G14580 Aethionema arabicum HOM05D008416 ORTHO05D010671 5.4e-17 91.3 89 46.1
A06p03810 Brassica napus HOM05D008416 ORTHO05D010671 5.4e-17 91.3 113 38.9
AL5G23850 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 2.7e-16 89.0 110 46.4
AT3G45252 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 6.0e-16 87.8 111 44.1
CARHR179970 Cardamine hirsuta HOM05D008416 ORTHO05D010671 3.9e-15 85.1 110 39.1
Carub.0005s1110 Capsella rubella HOM05D008416 ORTHO05D010671 9.6e-14 80.5 90 43.3
Carub.0005s1185 Capsella rubella HOM05D008416 ORTHO05D010671 1.6e-13 79.7 119 37.8
Carub.0005s1111 Capsella rubella HOM05D008416 ORTHO05D010671 4.0e-12 75.1 60 51.7
THA.LOC104816129 Tarenaya hassleriana HOM05D008416 ORTHO05D010671 5.5e-09 64.7 107 30.8
THA.LOC104817591 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 2.7e-08 62.4 105 31.4
THA.LOC104817592 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 2.7e-08 62.4 105 31.4
THA.LOC104817594 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 3.0e-07 58.9 105 28.6


User provided reference genes

Program Settings