Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G22950 Arabidopsis lyrata HOM05D003212 ORTHO05D003959 8.0e-20 99.4 47 100.0
Thhalv10010334m.g Eutrema salsugineum HOM05D003212 ORTHO05D003959 1.8e-08 61.6 42 76.2
Sp5g07950 Schrenkiella parvula HOM05D003212 ORTHO05D003959 1.8e-08 61.6 42 76.2
Aa31LG1G5360 Aethionema arabicum HOM05D003212 ORTHO05D003959 5.4e-08 60.1 43 72.1
AT3G54470 Arabidopsis thaliana HOM05D003212 ORTHO05D003959 7.0e-08 59.7 31 90.3
BcaB02g07736 Brassica carinata HOM05D003212 ORTHO05D003959 7.0e-08 59.7 31 90.3
A07p22130 Brassica napus HOM05D003212 ORTHO05D003959 7.0e-08 59.7 31 90.3
BraA07t29896Z Brassica rapa HOM05D003212 ORTHO05D003959 7.0e-08 59.7 31 90.3
Carub.0005s2109 Capsella rubella HOM05D003212 ORTHO05D003959 7.0e-08 59.7 31 90.3
CARHR164370 Cardamine hirsuta HOM05D003212 ORTHO05D003959 7.0e-08 59.7 31 90.3
AL5G35520 Arabidopsis lyrata HOM05D003212 ORTHO05D003959 2.0e-07 58.2 31 87.1
BcaC02g09067 Brassica carinata HOM05D003212 ORTHO05D003959 2.7e-07 57.8 31 87.1
BcaC08g44683 Brassica carinata HOM05D003212 ORTHO05D003959 2.7e-07 57.8 31 87.1
A04p05360 Brassica napus HOM05D003212 ORTHO05D003959 2.7e-07 57.8 31 87.1
C04p38050 Brassica napus HOM05D003212 ORTHO05D003959 2.7e-07 57.8 31 87.1
C06p22180 Brassica napus HOM05D003212 ORTHO05D003959 2.7e-07 57.8 31 87.1
BolC4t25379H Brassica oleracea HOM05D003212 ORTHO05D003959 2.7e-07 57.8 31 87.1
BolC6t37404H Brassica oleracea HOM05D003212 ORTHO05D003959 2.7e-07 57.8 31 87.1
BraA04t16236Z Brassica rapa HOM05D003212 ORTHO05D003959 2.7e-07 57.8 31 87.1
MSTRG.16992 Avicennia marina HOM05D003212 ORTHO05D003959 4.5e-07 57.0 42 71.4
SGA_v2.0_scaffold124G33627 Striga asiatica HOM05D003212 ORTHO05D003959 4.5e-07 57.0 31 87.1
SalBow5G4847 Salvia bowleyana HOM05D003212 ORTHO05D003959 5.9e-07 56.6 31 80.6
Oeu003925.2 Olea europaea HOM05D003212 ORTHO05D003959 1.0e-06 55.8 31 83.9
HanXRQChr13g0406671 Helianthus annuus HOM05D003212 ORTHO05D003959 1.3e-06 55.5 31 80.6
THA.LOC104824191 Tarenaya hassleriana HOM05D003212 ORTHO05D003959 1.7e-06 55.1 31 80.6
CSS0010475 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 2.2e-06 54.7 31 80.6
CSS0011806 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 2.2e-06 54.7 31 80.6
Os01g0951200 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 2.2e-06 54.7 31 80.6
Oeu056551.1 Olea europaea HOM05D003212 ORTHO05D003959 3.8e-06 53.9 30 83.3
Actinidia21523 Actinidia chinensis HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
Cpa.g.sc223.10 Carica papaya HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
COL.COLO4_09453 Corchorus olitorius HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
Dinv32034 Davidia involucrata HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
Duzib213G0398 Durio zibethinus HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
Duzib268G1229 Durio zibethinus HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
Gohir.A04G028000 Gossypium hirsutum HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
Gohir.D05G360100 Gossypium hirsutum HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
Gorai.009G432600 Gossypium raimondii HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
Lsat_1_v5_gn_5_157360 Lactuca sativa HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
Thecc.07G075400 Theobroma cacao HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
TWI38G0920 Tripterygium wilfordii HOM05D003212 ORTHO05D003959 5.0e-06 53.5 31 80.6
Atru.chr12.1386 Acer truncatum HOM05D003212 ORTHO05D003959 6.5e-06 53.1 31 80.6
Atru.chr12.1389 Acer truncatum HOM05D003212 ORTHO05D003959 6.5e-06 53.1 31 80.6
HanXRQChr01g0008251 Helianthus annuus HOM05D003212 ORTHO05D003959 6.5e-06 53.1 31 80.6
Peaxi162Scf00010g03311 Petunia axillaris HOM05D003212 ORTHO05D003959 6.5e-06 53.1 31 77.4
Peaxi162Scf01010g00217 Petunia axillaris HOM05D003212 ORTHO05D003959 6.5e-06 53.1 31 77.4
CAN.G745.39 Capsicum annuum HOM05D003212 ORTHO05D003959 8.5e-06 52.8 31 77.4
CAN.G919.25 Capsicum annuum HOM05D003212 ORTHO05D003959 8.5e-06 52.8 31 77.4
AUR62026849 Chenopodium quinoa HOM05D003212 ORTHO05D003959 8.5e-06 52.8 31 77.4
AUR62037200 Chenopodium quinoa HOM05D003212 ORTHO05D003959 8.5e-06 52.8 31 77.4
PGSC0003DMG400019620 Solanum tuberosum HOM05D003212 ORTHO05D003959 8.5e-06 52.8 31 77.4


User provided reference genes

Program Settings