Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G22540 Arabidopsis lyrata HOM05D006357 ORTHO05D007925 1.3e-97 359.8 187 100.0
Carub.0005s1011 Capsella rubella HOM05D006357 ORTHO05D007925 7.1e-96 354.0 187 97.9
AT3G44380 Arabidopsis thaliana HOM05D006357 ORTHO05D007925 3.5e-95 351.7 187 97.3
CARHR104480 Cardamine hirsuta HOM05D006357 ORTHO05D007925 2.8e-92 342.0 187 94.7
BcaB01g01165 Brassica carinata HOM05D006357 ORTHO05D007925 5.8e-90 334.3 187 91.4
Sp5g16810 Schrenkiella parvula HOM05D006357 ORTHO05D007925 1.3e-89 333.2 187 90.9
A06p22010 Brassica napus HOM05D006357 ORTHO05D007925 1.7e-89 332.8 187 92.0
BraA06t25289Z Brassica rapa HOM05D006357 ORTHO05D007925 1.7e-89 332.8 187 92.0
BcaC01g02047 Brassica carinata HOM05D006357 ORTHO05D007925 3.8e-89 331.6 187 91.4
C03p69190 Brassica napus HOM05D006357 ORTHO05D007925 3.8e-89 331.6 187 91.4
BolC3t19173H Brassica oleracea HOM05D006357 ORTHO05D007925 3.8e-89 331.6 187 91.4
Thhalv10010749m.g Eutrema salsugineum HOM05D006357 ORTHO05D007925 3.9e-86 321.6 187 88.2
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 8.5e-81 303.9 185 83.8
THA.LOC104814785 Tarenaya hassleriana HOM05D006357 ORTHO05D007925 2.0e-77 292.7 180 80.6
Thecc.09G281200 Theobroma cacao HOM05D006357 ORTHO05D007925 1.9e-72 276.2 182 75.3
Manes.11G162800 Manihot esculenta HOM05D006357 ORTHO05D007925 9.4e-72 273.9 182 74.2
Duzib150G0376 Durio zibethinus HOM05D006357 ORTHO05D007925 1.2e-71 273.5 179 76.0
Phvul.011G095000 Phaseolus vulgaris HOM05D006357 ORTHO05D007925 5.1e-70 268.1 181 72.4
Gohir.A08G005700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.1e-69 266.9 182 72.0
Dinv22833 Davidia involucrata HOM05D006357 ORTHO05D007925 1.5e-69 266.5 183 69.9
Prupe.6G132700 Prunus persica HOM05D006357 ORTHO05D007925 1.5e-69 266.5 182 71.4
Gohir.D08G016000 Gossypium hirsutum HOM05D006357 ORTHO05D007925 2.0e-69 266.2 180 71.7
Atru.chr3.3206 Acer truncatum HOM05D006357 ORTHO05D007925 5.7e-69 264.6 182 71.4
Gorai.004G010300 Gossypium raimondii HOM05D006357 ORTHO05D007925 5.7e-69 264.6 180 71.1
arahy.Tifrunner.gnm1.ann1.5186VC Arachis hypogaea HOM05D006357 ORTHO05D007925 7.4e-69 264.2 181 73.5
PGR119G0351 Punica granatum HOM05D006357 ORTHO05D007925 7.4e-69 264.2 181 72.9
VMungo1127G1055 Vigna mungo HOM05D006357 ORTHO05D007925 9.7e-69 263.8 181 70.7
Ciclev10029363m.g Citrus clementina HOM05D006357 ORTHO05D007925 2.2e-68 262.7 180 71.7
Atru.chr3.3208 Acer truncatum HOM05D006357 ORTHO05D007925 3.7e-68 261.9 182 70.9
arahy.Tifrunner.gnm1.ann1.JXBE2X Arachis hypogaea HOM05D006357 ORTHO05D007925 3.7e-68 261.9 181 72.9
Glyma.11G182400 Glycine max HOM05D006357 ORTHO05D007925 3.7e-68 261.9 180 71.1
Gohir.D07G114400 Gossypium hirsutum HOM05D006357 ORTHO05D007925 3.7e-68 261.9 180 71.7
FvH4_3g25140 Fragaria vesca HOM05D006357 ORTHO05D007925 1.1e-67 260.4 177 72.9
CANSAT54G2809 Cannabis sativa HOM05D006357 ORTHO05D007925 1.4e-67 260.0 179 70.4
Lalb_Chr01g0004891 Lupinus albus HOM05D006357 ORTHO05D007925 1.8e-67 259.6 180 69.4
CiPaw.13G134700 Carya illinoinensis HOM05D006357 ORTHO05D007925 2.4e-67 259.2 179 70.4
Eucgr.J00502 Eucalyptus grandis HOM05D006357 ORTHO05D007925 3.1e-67 258.8 178 72.5
Lj2P966T16 Lonicera japonica HOM05D006357 ORTHO05D007925 4.1e-67 258.5 182 69.8
MD03G1147800 Malus domestica HOM05D006357 ORTHO05D007925 4.1e-67 258.5 182 70.3
Gorai.001G122700 Gossypium raimondii HOM05D006357 ORTHO05D007925 5.3e-67 258.1 180 70.6
Gohir.A07G110700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 9.1e-67 257.3 179 70.9
Rhsim01G0204700 Rhododendron simsii HOM05D006357 ORTHO05D007925 2.6e-66 255.8 178 69.1
ClCG02G022220 Citrullus lanatus HOM05D006357 ORTHO05D007925 3.5e-66 255.4 182 69.8
Cfa010003 Carpinus fangiana HOM05D006357 ORTHO05D007925 4.5e-66 255.0 185 68.1
Lj3g0017887 Lotus japonicus HOM05D006357 ORTHO05D007925 4.5e-66 255.0 176 71.0
RcHm_v2.0_Chr5g0046241 Rosa chinensis HOM05D006357 ORTHO05D007925 4.5e-66 255.0 187 69.5
FAN21G3578 Fragaria x ananassa HOM05D006357 ORTHO05D007925 5.9e-66 254.6 177 71.2
QL01p012073 Quercus lobata HOM05D006357 ORTHO05D007925 5.9e-66 254.6 181 71.3
Solyc11g068550.1 Solanum lycopersicum HOM05D006357 ORTHO05D007925 1.0e-65 253.8 184 69.0
Sopen11g027270 Solanum pennellii HOM05D006357 ORTHO05D007925 1.0e-65 253.8 184 69.0
GSVIVG01036107001 Vitis vinifera HOM05D006357 ORTHO05D007925 1.0e-65 253.8 181 70.2
MELO3C014499.2 Cucumis melo HOM05D006357 ORTHO05D007925 2.2e-65 252.7 182 68.7
QL01p012091 Quercus lobata HOM05D006357 ORTHO05D007925 2.2e-65 252.7 181 70.7
TWI79G0514 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 2.9e-65 252.3 182 68.1
Nitab4.5_0006120g0030 Nicotiana tabacum HOM05D006357 ORTHO05D007925 3.8e-65 251.9 184 69.0
Aqoxy2G01095 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 5.0e-65 251.5 181 68.5
Cc01_g08980 Coffea canephora HOM05D006357 ORTHO05D007925 6.5e-65 251.1 178 68.5
Nitab4.5_0005641g0010 Nicotiana tabacum HOM05D006357 ORTHO05D007925 8.5e-65 250.8 184 69.0
Ah.08g215640 Amaranthus hybridus HOM05D006357 ORTHO05D007925 2.5e-64 249.2 180 68.3
Hma1.2p1_0587F.1_g184180 Hydrangea macrophylla HOM05D006357 ORTHO05D007925 2.5e-64 249.2 181 65.7
Potri.001G218400 Populus trichocarpa HOM05D006357 ORTHO05D007925 2.5e-64 249.2 183 67.2
TWI75G1708 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 2.5e-64 249.2 182 68.1
CsaV3_6G038350 Cucumis sativus L. HOM05D006357 ORTHO05D007925 4.2e-64 248.4 182 67.0
Medtr4g052840 Medicago truncatula HOM05D006357 ORTHO05D007925 4.2e-64 248.4 179 68.7
Psat7g187640 Pisum sativum HOM05D006357 ORTHO05D007925 4.2e-64 248.4 177 70.6
TPR.G17225 Trifolium pratense HOM05D006357 ORTHO05D007925 4.2e-64 248.4 181 68.5
Ca_19414_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 5.5e-64 248.1 179 67.6
CSS0003287 Camellia sinensis var. sinensis HOM05D006357 ORTHO05D007925 9.4e-64 247.3 181 67.4
Ca_26666_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 1.6e-63 246.5 181 66.3
Sabra16G0125700 Salix brachista HOM05D006357 ORTHO05D007925 3.6e-63 245.4 183 66.1
Prupe.6G132600 Prunus persica HOM05D006357 ORTHO05D007925 6.1e-63 244.6 180 66.1
EL10Ac7g15835 Beta vulgaris HOM05D006357 ORTHO05D007925 1.0e-62 243.8 180 66.1
Actinidia37077 Actinidia chinensis HOM05D006357 ORTHO05D007925 2.3e-62 242.7 180 66.7
PSO801G0234 Papaver somniferum HOM05D006357 ORTHO05D007925 3.0e-62 242.3 178 66.3
Migut.N02483 Erythranthe guttata HOM05D006357 ORTHO05D007925 4.0e-62 241.9 177 65.0
Lsat_1_v5_gn_1_59200 Lactuca sativa HOM05D006357 ORTHO05D007925 4.0e-62 241.9 180 65.6
SalBow3G2384 Salvia bowleyana HOM05D006357 ORTHO05D007925 6.7e-62 241.1 179 64.2
PSO339G3266 Papaver somniferum HOM05D006357 ORTHO05D007925 1.1e-61 240.4 178 66.3
MSTRG.12374 Avicennia marina HOM05D006357 ORTHO05D007925 2.6e-61 239.2 176 65.9
MD11G1166600 Malus domestica HOM05D006357 ORTHO05D007925 2.6e-61 239.2 181 64.1
Haze_23361 Corylus avellana HOM05D006357 ORTHO05D007925 1.3e-60 236.9 164 72.0
TAR633G1946 Trochodendron aralioides HOM05D006357 ORTHO05D007925 4.8e-60 235.0 176 63.6
MBI01_g14623_MAGBIO Magnolia biondii HOM05D006357 ORTHO05D007925 1.1e-59 233.8 177 65.5
Sc06g0008780 Simmondsia chinensis HOM05D006357 ORTHO05D007925 1.1e-59 233.8 179 62.6
unitig_699.g19178 Utricularia gibba HOM05D006357 ORTHO05D007925 2.4e-59 232.6 185 62.7
FvH4_3g25160 Fragaria vesca HOM05D006357 ORTHO05D007925 7.0e-59 231.1 178 64.6
Sed0020794 Sechium edule HOM05D006357 ORTHO05D007925 7.0e-59 231.1 182 64.3
FAN25G2095 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.2e-58 230.3 178 64.6
SGA_v2.0_scaffold177G39425 Striga asiatica HOM05D006357 ORTHO05D007925 3.5e-58 228.8 183 62.8
PGR102G0344 Punica granatum HOM05D006357 ORTHO05D007925 5.9e-58 228.0 178 62.4
Dinv42541 Davidia involucrata HOM05D006357 ORTHO05D007925 2.2e-57 226.1 166 65.7
HanXRQChr01g0024501 Helianthus annuus HOM05D006357 ORTHO05D007925 2.2e-57 226.1 185 60.0
FAN11G2870 Fragaria x ananassa HOM05D006357 ORTHO05D007925 2.5e-56 222.6 171 64.9
Aqoxy4G02740 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 3.2e-56 222.2 180 61.1
Lalb_Chr03g0028161 Lupinus albus HOM05D006357 ORTHO05D007925 2.1e-55 219.5 180 61.1
Nn6g34850 Nelumbo nucifera HOM05D006357 ORTHO05D007925 8.0e-55 217.6 176 58.0
Sc21g0007020 Simmondsia chinensis HOM05D006357 ORTHO05D007925 6.8e-54 214.5 191 58.6
DCAR_006168 Daucus carota HOM05D006357 ORTHO05D007925 8.3e-52 207.6 178 57.9
Nn6g34849 Nelumbo nucifera HOM05D006357 ORTHO05D007925 3.2e-48 195.7 179 53.6
AUR62009745 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.1e-47 193.0 200 51.0
AUR62036192 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.3e-46 189.5 199 50.3
Ah.15g095880 Amaranthus hybridus HOM05D006357 ORTHO05D007925 4.0e-46 188.7 192 52.1
AUR62036201 Chenopodium quinoa HOM05D006357 ORTHO05D007925 4.0e-46 188.7 142 64.8
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 1.7e-44 183.3 137 65.7
Os08g0558300 Oryza sativa ssp. japonica HOM05D006357 ORTHO05D007925 5.4e-43 178.3 175 53.7
RcHm_v2.0_Chr5g0046191 Rosa chinensis HOM05D006357 ORTHO05D007925 1.3e-41 173.7 121 75.2
PSO384G0917 Papaver somniferum HOM05D006357 ORTHO05D007925 3.8e-41 172.2 158 58.2
PSO339G1489 Papaver somniferum HOM05D006357 ORTHO05D007925 3.3e-40 169.1 158 56.3
Cpa.g.sc195.8 Carica papaya HOM05D006357 ORTHO05D007925 1.2e-37 160.6 102 79.4
AagrBONN_evm.TU.Sc2ySwM_117.3687 Anthoceros agrestis HOM05D006357 ORTHO05D007925 6.4e-36 154.8 169 46.2
PGSC0003DMG400026335 Solanum tuberosum HOM05D006357 ORTHO05D007925 2.4e-35 152.9 106 68.9
Mapoly0079s0020 Marchantia polymorpha HOM05D006357 ORTHO05D007925 1.2e-34 150.6 178 44.9
Pp3c21_10640 Physcomitrium patens HOM05D006357 ORTHO05D007925 3.0e-33 146.0 181 42.5
SMO347G0335 Selaginella moellendorffii HOM05D006357 ORTHO05D007925 6.6e-33 144.8 173 46.2
ATR0820G064 Amborella trichopoda HOM05D006357 ORTHO05D007925 4.7e-31 138.7 183 42.6
Pp3c2_16750 Physcomitrium patens HOM05D006357 ORTHO05D007925 1.0e-30 137.5 192 41.7
SEGI_40876 Sequoiadendron giganteum HOM05D006357 ORTHO05D007925 1.2e-29 134.0 175 41.1
Pp3c9_9450 Physcomitrium patens HOM05D006357 ORTHO05D007925 2.7e-26 122.9 170 38.8
Actinidia35469 Actinidia chinensis HOM05D006357 ORTHO05D007925 1.7e-25 120.2 93 61.3
ATR0820G202 Amborella trichopoda HOM05D006357 ORTHO05D007925 2.8e-23 112.8 132 46.2
AUR62036200 Chenopodium quinoa HOM05D006357 ORTHO05D007925 7.5e-21 104.8 95 53.7
AUR62044742 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.4e-19 99.8 76 60.5
ATR0820G128 Amborella trichopoda HOM05D006357 ORTHO05D007925 1.0e-17 94.4 93 51.6
Glyma.12G090400 Glycine max HOM05D006357 ORTHO05D007925 6.6e-09 65.1 69 42.0
Os05g0482501 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D000273 8.6e-09 64.7 135 33.3
CBR_g44534 Chara braunii HOM05D006357 ORTHO05D007925 3.6e-07 59.3 186 25.3
Pp3c18_21320 Physcomitrium patens HOM05D003111 ORTHO05D003502 8.1e-07 58.2 113 31.0
Thecc.04G170100 Theobroma cacao HOM05D000172 ORTHO05D000273 5.2e-06 55.5 146 31.5


User provided reference genes

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