Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G22320 Arabidopsis lyrata HOM05D007886 ORTHO05D038549 7.9e-118 427.2 222 100.0
AT3G44235 Arabidopsis thaliana HOM05D007886 ORTHO05D038549 8.5e-80 300.8 222 69.8
Carub.0006s1983 Capsella rubella HOM05D007886 ORTHO05D017386 2.4e-21 106.7 214 33.2
AL6G33180 Arabidopsis lyrata HOM05D007886 ORTHO05D017386 4.0e-21 105.9 198 34.3
CARHR191360 Cardamine hirsuta HOM05D007886 ORTHO05D017386 8.9e-21 104.8 201 34.8
Thhalv10016045m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 8.9e-21 104.8 199 36.7
BcaB01g04738 Brassica carinata HOM05D007886 ORTHO05D010538 2.6e-20 103.2 207 33.8
BcaC01g06599 Brassica carinata HOM05D007886 ORTHO05D010538 5.8e-20 102.1 214 35.5
Thhalv10015608m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 5.8e-20 102.1 161 38.5
BcaC04g19554 Brassica carinata HOM05D007886 ORTHO05D010538 2.2e-19 100.1 189 36.5
BraA10t43942Z Brassica rapa HOM05D007886 ORTHO05D010538 8.4e-19 98.2 192 35.9
A10p18630 Brassica napus HOM05D007886 ORTHO05D010538 3.2e-18 96.3 192 35.4
AL6G33140 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 4.2e-18 95.9 182 34.1
BcaB01g04722 Brassica carinata HOM05D007886 ORTHO05D010538 4.2e-18 95.9 209 32.1
BcaB08g36450 Brassica carinata HOM05D007886 ORTHO05D010538 4.2e-18 95.9 185 33.0
Carub.0006s1987 Capsella rubella HOM05D007886 ORTHO05D010538 5.4e-18 95.5 159 36.5
Carub.0006s1981 Capsella rubella HOM05D007886 ORTHO05D010538 7.1e-18 95.1 172 32.6
BcaB01g04725 Brassica carinata HOM05D007886 ORTHO05D010538 1.6e-17 94.0 209 33.0
AT5G22150 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 6.0e-17 92.0 160 36.2
Carub.0006s1985 Capsella rubella HOM05D007886 ORTHO05D010538 6.0e-17 92.0 192 32.8
BcaB04g20726 Brassica carinata HOM05D007886 ORTHO05D010538 2.3e-16 90.1 164 34.1
BcaC04g19546 Brassica carinata HOM05D007886 ORTHO05D010538 1.5e-15 87.4 194 33.0
C09p54520 Brassica napus HOM05D007886 ORTHO05D010538 1.5e-15 87.4 192 33.9
BcaB01g04729 Brassica carinata HOM05D007886 ORTHO05D010538 2.5e-15 86.7 187 32.1
BcaB01g04735 Brassica carinata HOM05D007886 ORTHO05D010538 2.5e-15 86.7 187 32.1
Carub.0006s1992 Capsella rubella HOM05D007886 ORTHO05D017386 2.5e-15 86.7 199 28.6
BolC9t58314H Brassica oleracea HOM05D007886 ORTHO05D010538 5.6e-15 85.5 179 35.8
BcaB01g04728 Brassica carinata HOM05D007886 ORTHO05D010538 1.6e-14 84.0 158 32.3
Carub.0006s1990 Capsella rubella HOM05D007886 ORTHO05D010538 1.6e-14 84.0 153 34.6
BcaB01g04732 Brassica carinata HOM05D007886 ORTHO05D010538 2.8e-14 83.2 194 33.0
A10p18650 Brassica napus HOM05D007886 ORTHO05D010538 2.8e-14 83.2 161 34.8
AL6G33190 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 8.1e-14 81.6 156 31.4
BolC9t58319H Brassica oleracea HOM05D007886 ORTHO05D010538 1.4e-13 80.9 159 35.2
BraA10t43940Z Brassica rapa HOM05D007886 ORTHO05D017386 2.4e-13 80.1 150 33.3
A10p18610 Brassica napus HOM05D007886 ORTHO05D017386 5.3e-13 79.0 150 32.7
AL6G33160 Arabidopsis lyrata HOM05D007886 ORTHO05D017386 2.7e-09 66.6 190 29.5
AT5G22170 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 7.9e-09 65.1 167 31.1
AT5G22190 Arabidopsis thaliana HOM05D007886 ORTHO05D017386 2.3e-08 63.5 120 30.8
BcaC04g19556 Brassica carinata HOM05D007886 ORTHO05D017386 3.0e-08 63.2 113 31.0
BraA10t43943Z Brassica rapa HOM05D007886 ORTHO05D010538 7.4e-07 58.5 140 31.4
C09p54450 Brassica napus HOM05D007886 ORTHO05D010538 1.3e-06 57.8 174 31.6


User provided reference genes

Program Settings