Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G22310 Arabidopsis lyrata HOM05D007886 ORTHO05D031309 4.9e-114 414.5 206 100.0
AT3G44230 Arabidopsis thaliana HOM05D007886 ORTHO05D031309 1.3e-90 336.7 204 82.4
Sp5g17090 Schrenkiella parvula HOM05D007886 ORTHO05D031309 1.1e-62 243.8 204 63.2
AL6G33130 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 2.9e-21 106.3 180 41.1
AT5G22160 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 9.2e-20 101.3 181 38.7
Thhalv10015632m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 9.2e-20 101.3 179 40.2
Carub.0006s1988 Capsella rubella HOM05D007886 ORTHO05D010538 1.2e-19 100.9 187 38.0
Carub.0006s1984 Capsella rubella HOM05D007886 ORTHO05D010538 3.9e-18 95.9 181 37.6
Carub.0006s1979 Capsella rubella HOM05D007886 ORTHO05D010538 1.5e-17 94.0 183 37.2
BraA10t43941Z Brassica rapa HOM05D007886 ORTHO05D017383 4.7e-16 89.0 180 36.7
A10p18620 Brassica napus HOM05D007886 ORTHO05D017383 1.4e-15 87.4 180 36.7
Carub.0006s1990 Capsella rubella HOM05D007886 ORTHO05D010538 5.2e-15 85.5 178 36.0
CARHR191380 Cardamine hirsuta HOM05D007886 ORTHO05D010538 6.8e-15 85.1 179 35.2
AL6G33190 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 1.2e-14 84.3 148 39.2
A03p10620 Brassica napus HOM05D007886 ORTHO05D010538 2.6e-14 83.2 175 35.4
BraA03t10374Z Brassica rapa HOM05D007886 ORTHO05D010538 2.6e-14 83.2 175 35.4
Carub.0006s1987 Capsella rubella HOM05D007886 ORTHO05D010538 3.4e-14 82.8 192 33.3
AT5G22150 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 5.8e-14 82.0 149 38.9
C03p12210 Brassica napus HOM05D007886 ORTHO05D010538 6.4e-13 78.6 175 33.7
BcaB01g04726 Brassica carinata HOM05D007886 ORTHO05D010538 1.1e-12 77.8 175 33.1
BcaC01g06600 Brassica carinata HOM05D007886 ORTHO05D010538 1.1e-12 77.8 175 33.7
BolC3t13694H Brassica oleracea HOM05D007886 ORTHO05D010538 1.1e-12 77.8 175 33.7
Carub.0006s1982 Capsella rubella HOM05D007886 ORTHO05D017383 1.1e-12 77.8 170 32.4
Thhalv10015608m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 2.4e-12 76.6 121 38.0
BcaB01g04737 Brassica carinata HOM05D007886 ORTHO05D010538 4.1e-12 75.9 165 35.2
Carub.0006s1991 Capsella rubella HOM05D007886 ORTHO05D017383 1.3e-10 70.9 170 32.4
A10p18630 Brassica napus HOM05D007886 ORTHO05D010538 7.3e-09 65.1 142 36.6
BcaC04g19545 Brassica carinata HOM05D007886 ORTHO05D010538 9.5e-09 64.7 178 29.2
A10p18650 Brassica napus HOM05D007886 ORTHO05D010538 3.6e-08 62.8 178 28.7
BraA10t43944Z Brassica rapa HOM05D007886 ORTHO05D010538 3.6e-08 62.8 178 28.7
BcaB04g20724 Brassica carinata HOM05D007886 ORTHO05D010538 4.0e-07 59.3 175 30.9
BraA10t43942Z Brassica rapa HOM05D007886 ORTHO05D010538 1.2e-06 57.8 142 35.2


User provided reference genes

Program Settings