Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G22200 Arabidopsis lyrata HOM05D011096 ORTHO05D013679 2.1e-60 235.3 107 100.0
AT3G44170 Arabidopsis thaliana HOM05D011096 ORTHO05D013679 8.9e-59 229.9 104 99.0
Carub.0005s0989 Capsella rubella HOM05D011096 ORTHO05D013679 5.0e-54 214.2 107 90.7
CARHR152950 Cardamine hirsuta HOM05D011096 ORTHO05D013679 1.1e-51 206.5 104 86.5
Thhalv10011134m.g Eutrema salsugineum HOM05D011096 ORTHO05D013679 1.3e-46 189.5 107 79.4
Sp5g17170 Schrenkiella parvula HOM05D011096 ORTHO05D013679 1.2e-44 183.0 107 76.6
BcaC01g02072 Brassica carinata HOM05D011096 ORTHO05D013679 6.2e-44 180.6 107 76.6
BolC3t19143H Brassica oleracea HOM05D011096 ORTHO05D013679 6.2e-44 180.6 107 76.6
BraA06t25305Z Brassica rapa HOM05D011096 ORTHO05D013679 1.4e-43 179.5 107 76.6
Aa31LG4G13400 Aethionema arabicum HOM05D011096 ORTHO05D013679 3.3e-37 158.3 103 63.1
BcaB04g19750 Brassica carinata HOM05D011096 ORTHO05D013679 7.3e-37 157.1 103 65.0
BcaC04g23601 Brassica carinata HOM05D011096 ORTHO05D013679 2.8e-36 155.2 103 62.1
AL5G44710 Arabidopsis lyrata HOM05D011096 ORTHO05D013679 1.1e-32 143.3 104 56.7
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 2.1e-31 139.0 104 58.7
CARHR187370 Cardamine hirsuta HOM05D011096 ORTHO05D013679 4.6e-31 137.9 108 54.6
C03p68880 Brassica napus HOM05D011096 ORTHO05D013679 4.6e-23 111.3 68 76.5
A06p22140 Brassica napus HOM05D011096 ORTHO05D013679 1.0e-22 110.2 68 76.5
THA.LOC104811312 Tarenaya hassleriana HOM05D012138 ORTHO05D014405 1.1e-11 73.6 100 39.0
CARHR187380 Cardamine hirsuta HOM05D012138 ORTHO05D014405 3.1e-11 72.0 102 33.3
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 1.2e-10 70.1 51 58.8
AT5G26100 Arabidopsis thaliana HOM05D012138 ORTHO05D014405 2.0e-10 69.3 100 36.0
Thhalv10005510m.g Eutrema salsugineum HOM05D012138 ORTHO05D014405 2.6e-10 68.9 100 35.0
Sp2g21630 Schrenkiella parvula HOM05D012138 ORTHO05D014405 2.6e-10 68.9 100 36.0
AL5G44720 Arabidopsis lyrata HOM05D012138 ORTHO05D014405 3.4e-10 68.6 100 35.0
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 1.3e-09 66.6 43 65.1
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 1.7e-09 66.2 43 67.4
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 3.8e-09 65.1 43 62.8
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 6.5e-09 64.3 43 65.1
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 2.5e-08 62.4 66 43.9
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 4.2e-08 61.6 44 54.5


User provided reference genes

Program Settings