Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G22030 Arabidopsis lyrata HOM05D000161 ORTHO05D038640 2.3e-114 415.6 220 100.0
Carub.0005s1009 Capsella rubella HOM05D000161 ORTHO05D038640 1.7e-48 196.8 220 55.9
AL2G14050 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.8e-26 123.6 247 39.7
Carub.0002s0311 Capsella rubella HOM05D000161 ORTHO05D000111 1.8e-26 123.6 258 37.6
AL2G14070 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 5.4e-26 122.1 255 38.8
CARHR050330 Cardamine hirsuta HOM05D000161 ORTHO05D000111 7.0e-26 121.7 257 38.9
BcaC04g22764 Brassica carinata HOM05D000161 ORTHO05D000111 5.9e-25 118.6 242 37.6
C09p15550 Brassica napus HOM05D000161 ORTHO05D000111 5.9e-25 118.6 242 37.6
BraA09t36957Z Brassica rapa HOM05D000161 ORTHO05D000111 1.3e-24 117.5 243 37.9
AT1G62120 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.3e-24 116.7 259 38.6
BcaC06g31903 Brassica carinata HOM05D000161 ORTHO05D000111 2.9e-24 116.3 251 37.5
A09p16570 Brassica napus HOM05D000161 ORTHO05D000111 3.8e-24 115.9 260 35.8
C03p71120 Brassica napus HOM05D000161 ORTHO05D000111 5.0e-24 115.5 245 38.8
CARHR050000 Cardamine hirsuta HOM05D000161 ORTHO05D000111 5.0e-24 115.5 252 38.1
BraA06t25140Z Brassica rapa HOM05D000161 ORTHO05D000111 8.6e-24 114.8 245 38.0
BraA09t37293Z Brassica rapa HOM05D000161 ORTHO05D000111 1.1e-23 114.4 260 35.0
BcaB07g31296 Brassica carinata HOM05D000161 ORTHO05D000111 1.9e-23 113.6 247 37.2
BolC3t19397H Brassica oleracea HOM05D000161 ORTHO05D000111 3.3e-23 112.8 245 38.4
CARHR050060 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.3e-23 112.8 256 37.5
A09p13110 Brassica napus HOM05D000161 ORTHO05D000111 4.3e-23 112.5 242 36.8
Sp2g02110 Schrenkiella parvula HOM05D000161 ORTHO05D000111 7.3e-23 111.7 262 34.7
A03p67410 Brassica napus HOM05D000161 ORTHO05D000111 9.5e-23 111.3 246 38.2
BraA01t02734Z Brassica rapa HOM05D000161 ORTHO05D000111 9.5e-23 111.3 246 38.2
Thhalv10023457m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 9.5e-23 111.3 257 37.7
Sp7g03520 Schrenkiella parvula HOM05D000161 ORTHO05D000111 9.5e-23 111.3 253 37.9
BcaB08g34472 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-22 110.9 258 35.3
Sp2g02100 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.2e-22 110.9 258 36.8
BolC3t17768H Brassica oleracea HOM05D000161 ORTHO05D000111 1.6e-22 110.5 248 35.9
CARHR050020 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.6e-22 110.5 236 38.1
BcaB04g20384 Brassica carinata HOM05D000161 ORTHO05D000111 2.8e-22 109.8 255 34.1
Thhalv10023461m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.8e-22 109.8 254 35.8
CARHR049980 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.6e-22 109.4 252 38.9
Thhalv10023838m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 6.1e-22 108.6 262 34.0
Sp5g14790 Schrenkiella parvula HOM05D000161 ORTHO05D000111 6.1e-22 108.6 247 37.2
Sp2g23340 Schrenkiella parvula HOM05D000161 ORTHO05D000111 8.0e-22 108.2 253 36.4
AT1G62085 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.0e-21 107.8 258 35.7
A06p20610 Brassica napus HOM05D000161 ORTHO05D000111 1.0e-21 107.8 246 37.4
AT1G61990 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.4e-21 107.5 247 38.1
Thhalv10024090m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.8e-21 107.1 258 34.5
Thhalv10023445m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.0e-21 106.3 256 34.4
A09p16580 Brassica napus HOM05D000161 ORTHO05D000111 4.0e-21 105.9 250 35.6
CARHR050220 Cardamine hirsuta HOM05D000161 ORTHO05D000111 4.0e-21 105.9 251 35.1
CARHR050320 Cardamine hirsuta HOM05D000161 ORTHO05D000111 4.0e-21 105.9 251 33.9
BcaC04g22370 Brassica carinata HOM05D000161 ORTHO05D000111 5.2e-21 105.5 252 38.1
C09p20080 Brassica napus HOM05D000161 ORTHO05D000111 5.2e-21 105.5 252 38.1
BolC9t54916H Brassica oleracea HOM05D000161 ORTHO05D000111 5.2e-21 105.5 252 38.1
Carub.0002s0308 Capsella rubella HOM05D000161 ORTHO05D000111 5.2e-21 105.5 249 34.9
Carub.0002s0310 Capsella rubella HOM05D000161 ORTHO05D000111 5.2e-21 105.5 258 33.7
AL2G13840 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 6.8e-21 105.1 248 37.5
Thhalv10024167m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 6.8e-21 105.1 263 33.8
BcaB07g31302 Brassica carinata HOM05D000161 ORTHO05D000111 8.9e-21 104.8 252 37.7
Carub.0002s0309 Capsella rubella HOM05D000161 ORTHO05D000111 8.9e-21 104.8 263 34.6
Thhalv10023447m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.9e-21 104.8 257 36.2
A01p30840 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-20 104.4 256 34.0
AL2G13820 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.5e-20 104.0 258 35.7
AL2G14080 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.5e-20 104.0 255 35.3
BcaB04g20385 Brassica carinata HOM05D000161 ORTHO05D000111 1.5e-20 104.0 246 36.2
BcaC06g31879 Brassica carinata HOM05D000161 ORTHO05D000111 1.5e-20 104.0 272 34.9
Carub.0006s2165 Capsella rubella HOM05D000161 ORTHO05D000111 1.5e-20 104.0 263 35.4
CARHR049990 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.5e-20 104.0 257 35.4
BraA01t03211Z Brassica rapa HOM05D000161 ORTHO05D000111 2.0e-20 103.6 257 32.7
BraA01t03212Z Brassica rapa HOM05D000161 ORTHO05D000111 2.0e-20 103.6 256 33.2
BraA09t36958Z Brassica rapa HOM05D000161 ORTHO05D000111 2.0e-20 103.6 249 34.5
Sp2g02600 Schrenkiella parvula HOM05D000161 ORTHO05D000111 2.0e-20 103.6 213 39.0
AL2G14090 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.6e-20 103.2 244 35.2
AT3G46950 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.6e-20 103.2 244 35.2
Thhalv10023470m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.6e-20 103.2 262 32.8
AL6G35250 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.4e-20 102.8 255 35.3
A01p30830 Brassica napus HOM05D000161 ORTHO05D000111 3.4e-20 102.8 257 32.7
CARHR155600 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.4e-20 102.8 253 33.2
Thhalv10023467m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.4e-20 102.8 260 36.5
AL5G26170 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 4.4e-20 102.4 249 34.5
Carub.0002s0249 Capsella rubella HOM05D000161 ORTHO05D000111 4.4e-20 102.4 257 32.3
A01p30850 Brassica napus HOM05D000161 ORTHO05D000111 5.7e-20 102.1 247 35.2
Carub.0002s0305 Capsella rubella HOM05D000161 ORTHO05D000111 5.7e-20 102.1 252 35.3
Sp2g02550 Schrenkiella parvula HOM05D000161 ORTHO05D000111 7.5e-20 101.7 260 34.2
Sp2g02560 Schrenkiella parvula HOM05D000161 ORTHO05D000111 9.8e-20 101.3 258 34.1
C01p39190 Brassica napus HOM05D000161 ORTHO05D000111 1.3e-19 100.9 256 32.4
BolC1t03869H Brassica oleracea HOM05D000161 ORTHO05D000111 1.3e-19 100.9 256 32.4
BcaC02g10522 Brassica carinata HOM05D000161 ORTHO05D000111 1.7e-19 100.5 248 35.9
BcaC05g30156 Brassica carinata HOM05D000161 ORTHO05D000111 1.7e-19 100.5 239 34.3
A09p13120 Brassica napus HOM05D000161 ORTHO05D000111 1.7e-19 100.5 249 34.1
C04p27930 Brassica napus HOM05D000161 ORTHO05D000111 1.7e-19 100.5 248 35.9
BolC4t24337H Brassica oleracea HOM05D000161 ORTHO05D000111 1.7e-19 100.5 248 35.9
Carub.0002s0295 Capsella rubella HOM05D000161 ORTHO05D000111 1.7e-19 100.5 246 35.4
AT1G61960 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.2e-19 100.1 255 34.5
BcaC06g31876 Brassica carinata HOM05D000161 ORTHO05D000111 2.2e-19 100.1 245 35.9
BcaB07g31298 Brassica carinata HOM05D000161 ORTHO05D000111 2.9e-19 99.8 261 33.3
C01p39210 Brassica napus HOM05D000161 ORTHO05D000111 2.9e-19 99.8 240 34.2
Thhalv10004187m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.9e-19 99.8 253 34.0
Thhalv10023505m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.7e-19 99.4 247 34.4
AT1G61980 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 4.9e-19 99.0 253 33.6
AL2G13790 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 6.4e-19 98.6 252 35.3
Thhalv10019750m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 6.4e-19 98.6 255 32.5
AT1G62150 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 8.3e-19 98.2 264 34.5
Carub.0002s0291 Capsella rubella HOM05D000161 ORTHO05D000111 1.1e-18 97.8 260 31.5
AT1G61970 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.4e-18 97.4 252 31.0
Thhalv10024124m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.8e-18 97.1 257 32.3
BcaC06g31880 Brassica carinata HOM05D000161 ORTHO05D000111 2.4e-18 96.7 227 33.9
CARHR050280 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.4e-18 96.7 251 35.5
BcaC04g22364 Brassica carinata HOM05D000161 ORTHO05D000111 3.2e-18 96.3 251 31.5
A03p44330 Brassica napus HOM05D000161 ORTHO05D000111 3.2e-18 96.3 252 33.3
C09p20140 Brassica napus HOM05D000161 ORTHO05D000111 3.2e-18 96.3 251 31.5
Thhalv10028140m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.2e-18 96.3 213 35.7
AL2G13770 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 5.4e-18 95.5 263 35.0
AL2G13900 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 5.4e-18 95.5 207 37.7
A09p16550 Brassica napus HOM05D000161 ORTHO05D000111 7.0e-18 95.1 266 34.6
BraA03t13562Z Brassica rapa HOM05D000161 ORTHO05D000111 9.2e-18 94.7 252 32.9
Carub.0002s0294 Capsella rubella HOM05D000161 ORTHO05D000111 9.2e-18 94.7 248 33.9
AT1G62110 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.2e-17 94.4 256 34.4
AT5G23930 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.2e-17 94.4 255 34.1
BcaC01g03302 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-17 94.4 251 32.3
BcaC04g22407 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-17 94.4 204 37.3
BcaC04g22763 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-17 94.4 246 32.9
BcaC06g31881 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-17 94.4 253 33.2
C01p39170 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-17 94.4 204 34.8
C09p15560 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-17 94.4 246 32.9
C09p19700 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-17 94.4 204 37.3
BolC3t17658H Brassica oleracea HOM05D000161 ORTHO05D000111 1.2e-17 94.4 251 32.3
BolC9t54461H Brassica oleracea HOM05D000161 ORTHO05D000111 1.2e-17 94.4 246 32.9
Thhalv10024133m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.2e-17 94.4 252 29.8
BcaC02g10507 Brassica carinata HOM05D000161 ORTHO05D000111 1.6e-17 94.0 253 32.8
BcaC04g22366 Brassica carinata HOM05D000161 ORTHO05D000111 1.6e-17 94.0 240 35.0
C04p28130 Brassica napus HOM05D000161 ORTHO05D000111 1.6e-17 94.0 253 32.8
BolC4t24356H Brassica oleracea HOM05D000161 ORTHO05D000111 1.6e-17 94.0 253 32.8
Carub.0002s0300 Capsella rubella HOM05D000161 ORTHO05D000111 1.6e-17 94.0 255 31.8
BolC9t54872H Brassica oleracea HOM05D000161 ORTHO05D000111 2.0e-17 93.6 204 37.3
AL2G14110 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.5e-17 92.8 258 34.1
BolC9t54920H Brassica oleracea HOM05D000161 ORTHO05D000111 4.6e-17 92.4 257 31.5
CARHR050290 Cardamine hirsuta HOM05D000161 ORTHO05D000111 5.9e-17 92.0 251 33.9
Aa31LG2G8900 Aethionema arabicum HOM05D000316 ORTHO05D000111 1.0e-16 91.3 258 35.3
A09p16240 Brassica napus HOM05D000161 ORTHO05D000111 1.0e-16 91.3 243 35.0
Thhalv10023801m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.0e-16 91.3 229 34.1
AL2G14100 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.3e-16 90.9 231 33.3
A06p34730 Brassica napus HOM05D000161 ORTHO05D000111 1.3e-16 90.9 252 32.9
BolC5t34823H Brassica oleracea HOM05D000161 ORTHO05D000111 1.3e-16 90.9 243 33.3
BcaC05g30109 Brassica carinata HOM05D000161 ORTHO05D000111 1.7e-16 90.5 243 32.9
A03p67460 Brassica napus HOM05D000161 ORTHO05D000111 1.7e-16 90.5 254 31.1
BraA01t02725Z Brassica rapa HOM05D000161 ORTHO05D000111 1.7e-16 90.5 254 31.1
BraA06t26401Z Brassica rapa HOM05D000161 ORTHO05D000111 1.7e-16 90.5 251 33.1
AL2G13930 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.0e-16 89.7 254 34.3
BcaB07g31330 Brassica carinata HOM05D000161 ORTHO05D000111 3.0e-16 89.7 201 36.8
C05p61650 Brassica napus HOM05D000161 ORTHO05D000111 3.9e-16 89.4 243 32.5
Sp3g04430 Schrenkiella parvula HOM05D000161 ORTHO05D000111 3.9e-16 89.4 252 34.9
BcaC02g10512 Brassica carinata HOM05D000161 ORTHO05D000111 6.6e-16 88.6 271 31.4
C04p28060 Brassica napus HOM05D000161 ORTHO05D000111 6.6e-16 88.6 271 31.4
BolC4t24350H Brassica oleracea HOM05D000161 ORTHO05D000111 6.6e-16 88.6 271 31.4
Carub.0002s0306 Capsella rubella HOM05D000161 ORTHO05D000111 6.6e-16 88.6 260 31.2
AL2G13990 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 8.6e-16 88.2 159 39.0
AT1G62490 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.1e-15 87.8 236 31.8
BcaB07g31299 Brassica carinata HOM05D000161 ORTHO05D000111 1.1e-15 87.8 249 32.9
BraA09t37261Z Brassica rapa HOM05D000161 ORTHO05D000111 1.1e-15 87.8 211 35.5
CARHR189630 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.1e-15 87.8 259 31.3
Thhalv10023472m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.5e-15 87.4 253 31.2
C03p54760 Brassica napus HOM05D000161 ORTHO05D000111 1.9e-15 87.0 249 30.9
C07p43750 Brassica napus HOM05D000161 ORTHO05D000111 1.9e-15 87.0 251 32.3
BolC7t44904H Brassica oleracea HOM05D000161 ORTHO05D000111 1.9e-15 87.0 251 32.3
BcaNung01835 Brassica carinata HOM05D000161 ORTHO05D000111 2.5e-15 86.7 251 32.3
CARHR050160 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.5e-15 86.7 245 33.5
AL2G13390 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 4.3e-15 85.9 256 32.0
BcaC04g22367 Brassica carinata HOM05D000161 ORTHO05D000111 5.6e-15 85.5 217 34.1
BcaNung01197 Brassica carinata HOM05D000161 ORTHO05D000111 5.6e-15 85.5 249 33.3
C09p20110 Brassica napus HOM05D000161 ORTHO05D000111 5.6e-15 85.5 217 34.1
BraA05t22959Z Brassica rapa HOM05D000161 ORTHO05D000111 1.2e-14 84.3 243 32.1
CARHR049970 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.4e-13 80.9 141 41.8
CARHR050310 Cardamine hirsuta HOM05D000161 ORTHO05D000111 5.2e-13 79.0 205 36.1
BolC1t03868H Brassica oleracea HOM05D000161 ORTHO05D000111 6.8e-13 78.6 230 30.0
AL2G13950 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.4e-12 76.3 249 30.9
C01p39160 Brassica napus HOM05D000161 ORTHO05D000111 3.4e-12 76.3 120 38.3
Sp2g02580 Schrenkiella parvula HOM05D000161 ORTHO05D000111 4.4e-12 75.9 146 38.4
Sp2g02610 Schrenkiella parvula HOM05D000161 ORTHO05D000111 4.4e-12 75.9 102 41.2
AT1G62010 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 5.8e-12 75.5 248 28.6
BcaB07g31297 Brassica carinata HOM05D000161 ORTHO05D000111 2.4e-10 70.1 227 29.5
Thhalv10022427m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 5.4e-10 68.9 261 31.4
Thhalv10024039m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 7.0e-10 68.6 210 30.5
Sp2g02590 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.0e-08 64.7 101 38.6
AL2G21920 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.3e-08 64.3 235 32.3
Carub.0005s1597 Capsella rubella HOM05D000161 ORTHO05D000111 2.3e-08 63.5 99 36.4
Sp2g02570 Schrenkiella parvula HOM05D000161 ORTHO05D000111 3.9e-08 62.8 241 28.2
Sp3g28660 Schrenkiella parvula HOM05D000161 ORTHO05D000111 3.9e-08 62.8 70 48.6
Carub.0005s1317 Capsella rubella HOM05D000161 ORTHO05D000111 1.9e-07 60.5 73 41.1
BcaC01g03202 Brassica carinata HOM05D000161 ORTHO05D000111 4.3e-07 59.3 132 39.4
C04p28840 Brassica napus HOM05D000161 ORTHO05D000111 4.3e-07 59.3 145 35.2
AL5G44270 Arabidopsis lyrata HOM05D000144 ORTHO05D000111 2.8e-06 56.6 114 29.8
AL2G14060 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.6e-06 56.2 132 37.9
BcaC02g10446 Brassica carinata HOM05D000161 ORTHO05D000111 3.6e-06 56.2 145 33.8
Thhalv10023911m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.6e-06 56.2 81 32.1


User provided reference genes

Program Settings