Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G21320 Arabidopsis lyrata HOM05D004832 ORTHO05D005821 2.1e-86 322.4 169 100.0
AL3G27790 Arabidopsis lyrata HOM05D004832 ORTHO05D005821 2.2e-80 302.4 163 96.3
Carub.0003s1502 Capsella rubella HOM05D004832 ORTHO05D005821 8.5e-80 300.4 168 93.5
Carub.0008s1260 Capsella rubella HOM05D004832 ORTHO05D005821 2.7e-78 295.4 167 92.2
Aa31LG8G2560 Aethionema arabicum HOM05D004832 ORTHO05D005821 3.9e-69 265.0 157 84.7
C01p49120 Brassica napus HOM05D004832 ORTHO05D005821 4.4e-68 261.5 169 78.1
BolC1t04876H Brassica oleracea HOM05D004832 ORTHO05D005821 9.7e-68 260.4 169 77.5
A01p38670 Brassica napus HOM05D004832 ORTHO05D005821 1.3e-67 260.0 169 76.9
BraA01t03917Z Brassica rapa HOM05D004832 ORTHO05D005821 1.3e-67 260.0 169 76.9
AT3G15351 Arabidopsis thaliana HOM05D004832 ORTHO05D005821 2.4e-66 255.8 137 95.6
BcaC09g48497 Brassica carinata HOM05D004832 ORTHO05D005821 2.4e-66 255.8 167 77.2
Thhalv10021656m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 7.7e-65 250.8 168 77.4
Sp7g07030 Schrenkiella parvula HOM05D004832 ORTHO05D005821 1.3e-64 250.0 165 75.2
Thhalv10023724m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 3.8e-64 248.4 168 76.2
BcaB07g33539 Brassica carinata HOM05D004832 ORTHO05D005821 1.9e-63 246.1 165 77.0
Thhalv10009807m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 2.1e-62 242.7 168 73.8
BcaC01g05853 Brassica carinata HOM05D004832 ORTHO05D005821 6.7e-61 237.7 158 75.3
Thhalv10009904m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 8.8e-61 237.3 168 72.6
C03p21760 Brassica napus HOM05D004832 ORTHO05D005821 8.5e-56 220.7 141 77.3
Phvul.010G055900 Phaseolus vulgaris HOM05D004832 ORTHO05D005821 7.2e-55 217.6 165 65.5
arahy.Tifrunner.gnm1.ann1.YIL91U Arachis hypogaea HOM05D004832 ORTHO05D005821 1.6e-54 216.5 163 68.1
Glyma.16G097600 Glycine max HOM05D004832 ORTHO05D005821 2.7e-54 215.7 165 65.5
arahy.Tifrunner.gnm1.ann1.W023QS Arachis hypogaea HOM05D004832 ORTHO05D005821 3.6e-54 215.3 164 67.1
arahy.Tifrunner.gnm1.ann1.32ME5N Arachis hypogaea HOM05D004832 ORTHO05D005821 1.0e-53 213.8 164 66.5
arahy.Tifrunner.gnm1.ann1.88IY7S Arachis hypogaea HOM05D004832 ORTHO05D005821 1.0e-53 213.8 164 66.5
arahy.Tifrunner.gnm1.ann1.A6AVFI Arachis hypogaea HOM05D004832 ORTHO05D005821 1.0e-53 213.8 164 66.5
Sabra02G0110600 Salix brachista HOM05D004832 ORTHO05D005821 1.0e-53 213.8 167 64.7
Eucgr.D02506 Eucalyptus grandis HOM05D004832 ORTHO05D005821 1.8e-53 213.0 164 64.0
Gohir.A11G077700 Gossypium hirsutum HOM05D004832 ORTHO05D005821 3.0e-53 212.2 165 64.8
Gorai.007G087800 Gossypium raimondii HOM05D004832 ORTHO05D005821 4.0e-53 211.8 165 64.8
Manes.01G270800 Manihot esculenta HOM05D004832 ORTHO05D005821 4.0e-53 211.8 165 63.6
Potri.002G142000 Populus trichocarpa HOM05D004832 ORTHO05D005821 5.2e-53 211.5 167 64.7
COL.COLO4_11958 Corchorus olitorius HOM05D004832 ORTHO05D005821 8.8e-53 210.7 165 66.7
DCAR_029781 Daucus carota HOM05D004832 ORTHO05D005821 8.8e-53 210.7 159 66.0
Gohir.D11G082100 Gossypium hirsutum HOM05D004832 ORTHO05D005821 8.8e-53 210.7 165 64.8
Potri.002G142100 Populus trichocarpa HOM05D004832 ORTHO05D005821 8.8e-53 210.7 167 64.1
Hund06868 Selenicereus undatus HOM05D004832 ORTHO05D005821 8.8e-53 210.7 164 63.4
CiPaw.13G030400 Carya illinoinensis HOM05D004832 ORTHO05D005821 1.2e-52 210.3 165 63.6
Lsat_1_v5_gn_4_43780 Lactuca sativa HOM05D004832 ORTHO05D005821 1.5e-52 209.9 160 65.6
Ciclev10022588m.g Citrus clementina HOM05D004832 ORTHO05D005821 2.0e-52 209.5 164 66.5
Lj3g0007809 Lotus japonicus HOM05D004832 ORTHO05D005821 2.0e-52 209.5 164 64.0
THA.LOC104813152 Tarenaya hassleriana HOM05D004832 ORTHO05D005821 2.6e-52 209.1 138 75.4
Thecc.01G386800 Theobroma cacao HOM05D004832 ORTHO05D005821 4.4e-52 208.4 165 64.2
Atru.chr5.207 Acer truncatum HOM05D004832 ORTHO05D005821 5.7e-52 208.0 165 64.2
COL.COLO4_12459 Corchorus olitorius HOM05D004832 ORTHO05D005821 5.7e-52 208.0 165 65.5
ClCG05G000300 Citrullus lanatus HOM05D004832 ORTHO05D005821 1.3e-51 206.8 160 61.9
MBI04_g11708_MAGBIO Magnolia biondii HOM05D004832 ORTHO05D005821 1.3e-51 206.8 164 63.4
CSS0038442 Camellia sinensis var. sinensis HOM05D004832 ORTHO05D005821 2.2e-51 206.1 165 63.6
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 4.8e-51 204.9 154 68.2
CsaV3_3G007460 Cucumis sativus L. HOM05D001289 ORTHO05D002298 4.8e-51 204.9 160 60.6
FAN01G1609 Fragaria x ananassa HOM05D004832 ORTHO05D005821 6.3e-51 204.5 165 60.6
GSVIVG01018202001 Vitis vinifera HOM05D004832 ORTHO05D005821 6.3e-51 204.5 154 65.6
Lalb_Chr07g0195651 Lupinus albus HOM05D004832 ORTHO05D005821 8.3e-51 204.1 159 63.5
ECA234G0521 Erigeron canadensis HOM05D004832 ORTHO05D005821 1.1e-50 203.8 160 63.8
FvH4_7g10630 Fragaria vesca HOM05D004832 ORTHO05D005821 1.1e-50 203.8 165 60.6
FAN06G0284 Fragaria x ananassa HOM05D004832 ORTHO05D005821 1.1e-50 203.8 165 60.6
FAN06G1644 Fragaria x ananassa HOM05D004832 ORTHO05D005821 1.1e-50 203.8 165 60.6
RcHm_v2.0_Chr1g0348571 Rosa chinensis HOM05D004832 ORTHO05D005821 1.1e-50 203.8 165 60.6
MELO3C005967.2 Cucumis melo HOM05D004832 ORTHO05D005821 1.4e-50 203.4 160 60.6
Lj9A562G31 Lonicera japonica HOM05D004832 ORTHO05D005821 1.4e-50 203.4 166 61.4
Sed0016485 Sechium edule HOM05D004832 ORTHO05D005821 1.4e-50 203.4 154 63.0
Medtr4g093680 Medicago truncatula HOM05D004832 ORTHO05D005821 2.4e-50 202.6 165 62.4
CANSAT64G0775 Cannabis sativa HOM05D004832 ORTHO05D005821 3.1e-50 202.2 161 64.0
Prupe.2G134800 Prunus persica HOM05D004832 ORTHO05D005821 3.1e-50 202.2 154 64.3
PSO063G5716 Papaver somniferum HOM05D004832 ORTHO05D005821 4.1e-50 201.8 163 62.0
Dinv43651 Davidia involucrata HOM05D004832 ORTHO05D005821 7.0e-50 201.1 160 61.9
Peaxi162Scf00377g00611 Petunia axillaris HOM05D004832 ORTHO05D005821 1.2e-49 200.3 165 61.8
Sc08g0005120 Simmondsia chinensis HOM05D004832 ORTHO05D005821 1.2e-49 200.3 165 60.6
TPR.G2894 Trifolium pratense HOM05D004832 ORTHO05D005821 1.2e-49 200.3 159 62.3
ATR0317G035 Amborella trichopoda HOM05D004832 ORTHO05D005821 2.0e-49 199.5 159 62.9
MSTRG.17149 Avicennia marina HOM05D004832 ORTHO05D005821 2.0e-49 199.5 165 63.0
MD07G1111400 Malus domestica HOM05D004832 ORTHO05D005821 2.7e-49 199.1 165 60.6
MD10G1232800 Malus domestica HOM05D004832 ORTHO05D005821 2.7e-49 199.1 165 60.6
Nitab4.5_0000706g0140 Nicotiana tabacum HOM05D004832 ORTHO05D005821 2.7e-49 199.1 165 60.0
Cfa011129 Carpinus fangiana HOM05D004832 ORTHO05D005821 3.5e-49 198.7 165 60.0
Psat2g165520 Pisum sativum HOM05D004832 ORTHO05D005821 3.5e-49 198.7 160 63.1
Oeu061515.1 Olea europaea HOM05D004832 ORTHO05D005821 7.7e-49 197.6 162 61.7
PSO017G2958 Papaver somniferum HOM05D004832 ORTHO05D005821 7.7e-49 197.6 150 65.3
Ca_18388_v3 Cicer arietinum L. HOM05D004832 ORTHO05D005821 1.0e-48 197.2 165 60.0
Solyc01g090720.3 Solanum lycopersicum HOM05D004832 ORTHO05D005821 1.0e-48 197.2 165 58.2
CAN.G899.18 Capsicum annuum HOM05D004832 ORTHO05D005821 1.3e-48 196.8 165 59.4
Nitab4.5_0001823g0010 Nicotiana tabacum HOM05D004832 ORTHO05D005821 1.3e-48 196.8 165 60.0
VMungo0331G1454 Vigna mungo HOM05D004832 ORTHO05D005821 2.2e-48 196.1 137 70.1
Cc02_g24530 Coffea canephora HOM05D004832 ORTHO05D005821 2.9e-48 195.7 159 61.0
Lj5g0022701 Lotus japonicus HOM05D004832 ORTHO05D005821 5.0e-48 194.9 165 60.6
Hma1.2p1_0341F.1_g130370 Hydrangea macrophylla HOM05D004832 ORTHO05D005821 6.5e-48 194.5 163 60.7
SGA_v2.0_scaffold52G19196 Striga asiatica HOM05D004832 ORTHO05D005821 6.5e-48 194.5 162 63.0
HanXRQChr16g0519281 Helianthus annuus HOM05D004832 ORTHO05D005821 8.5e-48 194.1 160 60.6
Duzib138G0601 Durio zibethinus HOM05D004832 ORTHO05D005821 1.5e-47 193.4 138 69.6
Migut.B01571 Erythranthe guttata HOM05D004832 ORTHO05D005821 1.5e-47 193.4 164 61.0
SGA_v2.0_scaffold153G36948 Striga asiatica HOM05D004832 ORTHO05D005821 1.5e-47 193.4 159 62.9
Sopen01g036450 Solanum pennellii HOM05D004832 ORTHO05D005821 1.9e-47 193.0 165 57.0
BcaB04g20935 Brassica carinata HOM05D002732 ORTHO05D006371 3.2e-47 192.2 122 79.5
Aqoxy7G02831 Aquilegia oxysepala HOM05D004832 ORTHO05D005821 4.2e-47 191.8 153 61.4
vmacro00550 Vaccinium macrocarpon HOM05D004832 ORTHO05D005821 5.5e-47 191.4 186 55.9
HanXRQChr05g0138431 Helianthus annuus HOM05D004832 ORTHO05D005821 9.4e-47 190.7 160 60.0
Nn6g33924 Nelumbo nucifera HOM05D004832 ORTHO05D005821 9.4e-47 190.7 153 61.4
HPP92_023799 Vanilla planifolia HOM05D004832 ORTHO05D005821 1.2e-46 190.3 164 56.1
Glyma.07G109700 Glycine max HOM05D004832 ORTHO05D005821 1.6e-46 189.9 148 64.9
Haze_02734 Corylus avellana HOM05D004832 ORTHO05D005821 8.0e-46 187.6 187 53.5
Thhalv10009921m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 1.8e-45 186.4 168 62.5
FAN03G2909 Fragaria x ananassa HOM05D004832 ORTHO05D005821 3.0e-45 185.7 189 51.9
Ah.03g133100 Amaranthus hybridus HOM05D004832 ORTHO05D005821 6.8e-45 184.5 137 65.0
Rhsim07G0033000 Rhododendron simsii HOM05D004832 ORTHO05D005821 2.0e-44 183.0 197 50.8
PGR119G1038 Punica granatum HOM05D004832 ORTHO05D005821 7.5e-44 181.0 160 58.8
Zm00001eb272690 Zea mays HOM05D004832 ORTHO05D005821 3.7e-43 178.7 163 54.0
SEGI_17839 Sequoiadendron giganteum HOM05D004832 ORTHO05D005821 1.2e-41 173.7 163 54.0
AUR62024291 Chenopodium quinoa HOM05D004832 ORTHO05D005821 5.9e-41 171.4 129 64.3
CDE06G2810 Ceratophyllum demersum HOM05D004832 ORTHO05D005821 1.7e-40 169.9 139 59.0
AUR62035275 Chenopodium quinoa HOM05D004832 ORTHO05D005821 2.9e-40 169.1 134 61.2
Glyma.02G101600 Glycine max HOM05D004832 ORTHO05D005821 5.0e-40 168.3 126 65.9
Os07g0485600 Oryza sativa ssp. japonica HOM05D004832 ORTHO05D005821 5.0e-40 168.3 125 62.4
Sp1g41650 Schrenkiella parvula HOM05D004832 ORTHO05D005821 6.6e-40 167.9 118 70.3
MBI03_g13774_MAGBIO Magnolia biondii HOM05D004832 ORTHO05D005821 1.8e-37 159.8 172 50.0
DCAR_022632 Daucus carota HOM05D004832 ORTHO05D005821 2.2e-35 152.9 113 68.1
arahy.Tifrunner.gnm1.ann1.W1G7Z9 Arachis hypogaea HOM05D004832 ORTHO05D005821 6.3e-35 151.4 111 68.5
BcaC08g43270 Brassica carinata HOM05D004832 ORTHO05D005821 1.8e-34 149.8 167 56.3
CSS0042819 Camellia sinensis var. sinensis HOM05D004832 ORTHO05D005821 7.0e-34 147.9 117 64.1
Thhalv10002901m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 9.2e-34 147.5 164 55.5
TAR629G1420 Trochodendron aralioides HOM05D004832 ORTHO05D005821 9.2e-34 147.5 111 64.0
QL04p035586 Quercus lobata HOM05D004832 ORTHO05D005821 1.6e-33 146.7 116 63.8
QL04p020302 Quercus lobata HOM05D004832 ORTHO05D005821 5.6e-31 138.3 116 61.2
Psat5g158760 Pisum sativum HOM05D004832 ORTHO05D005821 7.3e-31 137.9 132 56.8
Thhalv10009561m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 4.7e-30 135.2 99 73.7
Mapoly0002s0300 Marchantia polymorpha HOM05D004832 ORTHO05D005821 1.4e-29 133.7 164 43.9
C06p06180 Brassica napus HOM05D004832 ORTHO05D005821 3.1e-29 132.5 75 86.7
BolC6t35729H Brassica oleracea HOM05D004832 ORTHO05D005821 3.1e-29 132.5 75 86.7
QL04p046167 Quercus lobata HOM05D004832 ORTHO05D005821 8.9e-29 131.0 116 59.5
CARHR215320 Cardamine hirsuta HOM05D004832 ORTHO05D005821 3.4e-28 129.0 71 90.1
CARHR090340 Cardamine hirsuta HOM05D004832 ORTHO05D005821 7.5e-28 127.9 79 87.3
SMO141G0160 Selaginella moellendorffii HOM05D004832 ORTHO05D005821 9.8e-28 127.5 146 45.2
Pp3c10_24560 Physcomitrium patens HOM05D004832 ORTHO05D005821 2.9e-27 125.9 150 42.7
SEGI_40532 Sequoiadendron giganteum HOM05D004832 ORTHO05D005821 4.9e-27 125.2 123 51.2
HPP92_023759 Vanilla planifolia HOM05D004832 ORTHO05D005821 8.3e-27 124.4 120 51.7
QL04p046254 Quercus lobata HOM05D003594 ORTHO05D004268 2.4e-26 122.9 88 67.0
AagrBONN_evm.TU.Sc2ySwM_368.2344 Anthoceros agrestis HOM05D004832 ORTHO05D005821 5.4e-26 121.7 152 44.1
AUR62005450 Chenopodium quinoa HOM05D004832 ORTHO05D005821 2.3e-24 116.3 147 47.6
HanXRQChr13g0390291 Helianthus annuus HOM05D004832 ORTHO05D005821 4.3e-23 112.1 91 54.9
Psat6g056000 Pisum sativum HOM05D004832 ORTHO05D005821 8.9e-21 104.4 110 53.6
Atru.chr5.209 Acer truncatum HOM05D004832 ORTHO05D005821 1.2e-20 104.0 72 68.1
HPP92_023760 Vanilla planifolia HOM05D004832 ORTHO05D005821 1.2e-20 104.0 100 51.0
Glyma.03G117400 Glycine max HOM05D004832 ORTHO05D005821 1.7e-19 100.1 71 66.2
Potri.014G057550 Populus trichocarpa HOM05D004832 ORTHO05D005821 2.1e-17 93.2 137 41.6
EL10Ac6g13797 Beta vulgaris HOM05D004832 ORTHO05D005821 4.6e-17 92.0 84 57.1
QL12p027350 Quercus lobata HOM05D004832 ORTHO05D005821 8.9e-13 77.8 52 61.5
Os06g0535333 Oryza sativa ssp. japonica HOM05D004832 ORTHO05D005821 8.3e-11 71.2 59 59.3
arahy.Tifrunner.gnm1.ann1.T8JHIW Arachis hypogaea HOM05D004832 ORTHO05D005821 2.4e-10 69.7 67 53.7
Oeu063212.2 Olea europaea HOM05D004832 ORTHO05D005821 3.0e-08 62.8 52 59.6
Sabra14G0041800 Salix brachista HOM05D004832 ORTHO05D005821 3.0e-08 62.8 75 50.7
Atru.chr5.565 Acer truncatum HOM05D004832 ORTHO05D005821 6.6e-08 61.6 48 64.6
Atru.chr5.584 Acer truncatum HOM05D004832 ORTHO05D005821 6.6e-08 61.6 48 64.6
Nn1g00967 Nelumbo nucifera HOM05D004832 ORTHO05D005821 3.3e-07 59.3 57 43.9
vmacro05238 Vaccinium macrocarpon HOM05D004832 ORTHO05D005821 2.8e-06 56.2 39 71.8


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