Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G20110 Arabidopsis lyrata HOM05D004198 ORTHO05D080677 2.9e-15 84.0 40 100.0
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 5.4e-09 63.2 38 76.3
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 5.4e-09 63.2 38 76.3
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 5.4e-09 63.2 38 76.3
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 7.0e-09 62.8 38 76.3
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 9.2e-09 62.4 38 78.9
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 1.2e-08 62.0 38 76.3
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 2.0e-08 61.2 38 73.7
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 3.5e-08 60.5 38 76.3
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 5.9e-08 59.7 38 71.1
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 1.0e-07 58.9 38 71.1
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 1.7e-07 58.2 38 71.1
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.7e-07 58.2 38 71.1
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.7e-07 58.2 38 71.1
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.7e-07 58.2 38 71.1
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 3.0e-07 57.4 38 71.1
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 5.0e-07 56.6 36 72.2
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 6.6e-07 56.2 38 65.8
Zm00001eb257190 Zea mays HOM05D004198 ORTHO05D030652 8.6e-07 55.8 38 68.4
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 1.1e-06 55.5 36 69.4
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 1.1e-06 55.5 36 69.4
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 1.1e-06 55.5 36 69.4
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 1.1e-06 55.5 38 68.4
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 1.1e-06 55.5 38 65.8
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 3.3e-06 53.9 36 66.7
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 3.3e-06 53.9 36 66.7
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 3.3e-06 53.9 36 66.7
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 3.3e-06 53.9 36 69.4
Zm00001eb192910 Zea mays HOM05D004198 ORTHO05D006470 3.3e-06 53.9 38 65.8
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 7.3e-06 52.8 36 66.7
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 7.3e-06 52.8 36 63.9
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 9.5e-06 52.4 36 63.9
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 9.5e-06 52.4 36 63.9
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 9.5e-06 52.4 36 66.7
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 9.5e-06 52.4 36 66.7


User provided reference genes

Program Settings