Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G18500 Arabidopsis lyrata HOM05D011893 ORTHO05D013967 0.0e+00 1256.9 1974 100.0
AT3G28770 Arabidopsis thaliana HOM05D011893 ORTHO05D013967 2.0e-108 399.1 2120 66.0
SpUn0298_0010 Schrenkiella parvula HOM05D011893 ORTHO05D013967 1.6e-76 293.1 284 72.9
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 8.1e-73 280.8 199 82.4
BcaC03g17528 Brassica carinata HOM05D011893 ORTHO05D013967 4.4e-71 275.0 278 65.8
BolC2t11550H Brassica oleracea HOM05D011893 ORTHO05D013967 8.4e-70 270.8 364 55.5
BcaB07g30118 Brassica carinata HOM05D011893 ORTHO05D013967 3.2e-69 268.9 268 62.7
A02p36060 Brassica napus HOM05D011893 ORTHO05D013967 1.2e-68 266.9 196 82.7
BraA02t08605Z Brassica rapa HOM05D011893 ORTHO05D013967 1.2e-68 266.9 196 82.7
C02p54900 Brassica napus HOM05D011893 ORTHO05D013967 4.6e-68 265.0 197 81.7
Aa31LG2G4440 Aethionema arabicum HOM05D011893 ORTHO05D013967 4.2e-45 188.7 196 57.7
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 9.3e-45 187.6 170 61.8
Sp2g17420 Schrenkiella parvula HOM05D011893 ORTHO05D013967 1.0e-38 167.5 432 47.5
Thhalv10005404m.g Eutrema salsugineum HOM05D011893 ORTHO05D013967 4.2e-29 135.6 123 72.4
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.1e-26 127.5 151 48.3
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 5.0e-22 112.1 158 41.1
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 5.0e-22 112.1 158 41.1
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 5.0e-22 112.1 158 41.1
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 4.7e-20 105.5 160 42.5
Carub.0005s0735 Capsella rubella HOM05D008352 ORTHO05D011361 1.4e-19 104.0 160 41.9
Aa31LG2G4400 Aethionema arabicum HOM05D008352 ORTHO05D011361 1.8e-19 103.6 149 43.6
Aa31LG2G4450 Aethionema arabicum HOM05D011893 ORTHO05D013967 2.3e-19 103.2 127 55.9
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 3.0e-19 102.8 146 45.2
AT3G28810 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 6.7e-19 101.7 160 41.2
AT3G28820 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 8.8e-19 101.3 160 41.2
Sp1g26250 Schrenkiella parvula HOM05D008352 ORTHO05D011361 1.5e-18 100.5 148 41.9
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 7.4e-18 98.2 158 39.9
AL5G18840 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 3.7e-17 95.9 148 41.9
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 1.1e-16 94.4 148 41.2
AT3G28980 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 1.8e-16 93.6 148 41.2
Carub.0005s0757 Capsella rubella HOM05D008352 ORTHO05D011361 1.8e-16 93.6 150 41.3
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 2.4e-16 93.2 169 37.9
BraA09t39127Z Brassica rapa HOM05D008352 ORTHO05D011361 4.1e-16 92.4 148 38.5
A09p36020 Brassica napus HOM05D008352 ORTHO05D011361 9.1e-16 91.3 148 37.8
Carub.0007s3585 Capsella rubella HOM05D008352 ORTHO05D014403 9.1e-16 91.3 168 38.7
CARHR152080 Cardamine hirsuta HOM05D008352 ORTHO05D011361 1.6e-15 90.5 153 38.6
BcaB07g32652 Brassica carinata HOM05D008352 ORTHO05D011361 4.5e-15 89.0 163 34.4
THA.LOC104823935 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 5.9e-15 88.6 143 39.9
AT5G39870 Arabidopsis thaliana HOM05D008352 ORTHO05D014403 1.0e-14 87.8 169 37.3
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 2.2e-14 86.7 168 38.1
C07p38160 Brassica napus HOM05D008352 ORTHO05D011361 5.0e-14 85.5 148 39.2
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 5.0e-14 85.5 143 39.9
Sp7g02170 Schrenkiella parvula HOM05D008352 ORTHO05D014403 6.5e-14 85.1 148 39.9
A06p40010 Brassica napus HOM05D008352 ORTHO05D011361 8.5e-14 84.7 148 39.2
BolC7t44338H Brassica oleracea HOM05D008352 ORTHO05D011361 8.5e-14 84.7 148 39.2
BraA06t26916Z Brassica rapa HOM05D008352 ORTHO05D011361 8.5e-14 84.7 148 39.2
AL5G18530 Arabidopsis lyrata HOM05D008352 ORTHO05D011250 1.1e-13 84.3 137 40.9
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 1.5e-13 84.0 146 38.4
BcaB07g32675 Brassica carinata HOM05D008352 ORTHO05D011361 2.5e-13 83.2 148 35.8
C03p76750 Brassica napus HOM05D008352 ORTHO05D011361 2.5e-13 83.2 159 35.2
C05p29370 Brassica napus HOM05D008352 ORTHO05D011361 2.5e-13 83.2 148 35.8
BolC5t31669H Brassica oleracea HOM05D008352 ORTHO05D011361 2.5e-13 83.2 148 35.8
THA.LOC104823938 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 3.2e-13 82.8 143 39.2
A08p24470 Brassica napus HOM05D008352 ORTHO05D011361 4.2e-13 82.4 148 35.1
BraA08t34403Z Brassica rapa HOM05D008352 ORTHO05D011361 4.2e-13 82.4 148 35.1
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 1.2e-12 80.9 143 39.2
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.6e-12 80.5 146 34.2
BcaC01g00190 Brassica carinata HOM05D008352 ORTHO05D011361 2.7e-12 79.7 148 35.8
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 6.1e-12 78.6 141 36.2
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 8.0e-12 78.2 141 36.2
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 8.0e-12 78.2 141 36.2
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 1.8e-11 77.0 146 36.3
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 2.3e-11 76.6 152 34.9
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 3.0e-11 76.3 141 35.5
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 3.0e-11 76.3 141 35.5
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 5.2e-11 75.5 144 36.8
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 6.8e-11 75.1 147 36.1
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 8.8e-11 74.7 152 35.5
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 1.2e-10 74.3 143 35.7
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 1.2e-10 74.3 145 35.9
A04p12630 Brassica napus HOM05D008352 ORTHO05D014403 1.2e-10 74.3 162 35.8
BraA04t16920Z Brassica rapa HOM05D008352 ORTHO05D014403 1.2e-10 74.3 162 35.8
THA.LOC104823936 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 1.2e-10 74.3 139 38.1
C04p46350 Brassica napus HOM05D008352 ORTHO05D014403 1.5e-10 73.9 147 36.7
BolC4t26221H Brassica oleracea HOM05D008352 ORTHO05D014403 1.5e-10 73.9 147 36.7
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 2.0e-10 73.6 143 35.7
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 3.4e-10 72.8 140 35.0
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 8.3e-09 68.2 143 37.1
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 8.3e-09 68.2 143 37.1
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 3.1e-08 66.2 137 34.3
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 3.1e-08 66.2 137 34.3
BcaB06g27386 Brassica carinata HOM05D008352 ORTHO05D014403 4.1e-08 65.9 153 33.3
BcaB06g27388 Brassica carinata HOM05D008352 ORTHO05D014403 5.3e-08 65.5 159 34.6
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 5.3e-08 65.5 139 36.7
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 5.3e-08 65.5 139 36.7
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 7.0e-08 65.1 110 38.2
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.2e-07 64.3 154 32.5
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 5.9e-07 62.0 156 28.8


User provided reference genes

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