Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 3.7e-146 521.5 268 100.0
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 3.8e-143 511.5 268 97.8
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 9.1e-137 490.3 268 93.3
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 2.8e-130 468.8 268 91.4
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 4.1e-129 464.9 269 90.0
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 2.3e-127 459.1 267 89.5
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 5.0e-127 458.0 267 89.5
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 1.6e-125 453.0 269 88.5
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.6e-125 453.0 271 89.7
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 4.7e-125 451.4 269 88.5
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 4.7e-125 451.4 269 88.5
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 3.0e-124 448.7 272 87.9
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 3.4e-123 445.3 269 85.5
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 3.7e-122 441.8 268 87.7
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 2.4e-113 412.5 271 80.8
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 4.1e-105 385.2 230 87.8
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.2e-101 373.6 268 73.5
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 4.7e-101 371.7 272 74.6
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 5.6e-86 321.6 274 66.4
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 2.8e-85 319.3 284 63.7
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.8e-85 318.5 256 68.8
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 4.8e-85 318.5 243 70.8
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 6.2e-85 318.2 267 67.4
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 6.2e-85 318.2 254 67.7
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 8.1e-85 317.8 267 65.2
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 1.1e-84 317.4 271 66.1
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.8e-84 316.6 277 66.1
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.0e-84 315.5 271 65.7
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 4.0e-84 315.5 268 65.3
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 5.3e-84 315.1 269 65.4
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 6.9e-84 314.7 201 81.1
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 6.9e-84 314.7 267 65.5
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 6.9e-84 314.7 268 65.7
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.5e-83 313.5 256 67.6
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.5e-83 313.5 205 79.5
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.5e-83 313.5 268 67.2
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 1.5e-83 313.5 232 73.3
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.0e-83 313.2 270 63.3
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.6e-83 312.8 256 67.6
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 2.6e-83 312.8 253 66.0
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 4.5e-83 312.0 216 75.9
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 4.5e-83 312.0 216 75.9
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 5.8e-83 311.6 198 81.8
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 5.8e-83 311.6 216 76.4
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 7.6e-83 311.2 265 65.3
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 9.9e-83 310.8 216 75.5
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 9.9e-83 310.8 269 65.8
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 9.9e-83 310.8 270 65.6
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 1.7e-82 310.1 198 81.3
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.7e-82 310.1 213 74.6
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.7e-82 310.1 276 64.5
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 2.2e-82 309.7 273 64.8
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 2.9e-82 309.3 231 71.0
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 2.9e-82 309.3 201 78.6
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 2.9e-82 309.3 241 68.0
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 2.9e-82 309.3 207 79.2
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 2.9e-82 309.3 214 75.7
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 3.8e-82 308.9 211 76.8
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 8.4e-82 307.8 215 75.3
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 1.1e-81 307.4 214 75.2
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.1e-81 307.4 273 61.9
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.1e-81 307.4 271 64.9
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 1.4e-81 307.0 197 79.7
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 1.4e-81 307.0 214 76.2
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 1.4e-81 307.0 252 67.9
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 1.4e-81 307.0 275 64.4
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 1.9e-81 306.6 270 64.1
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 1.9e-81 306.6 217 73.7
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 1.9e-81 306.6 226 71.7
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 1.9e-81 306.6 215 72.6
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 2.4e-81 306.2 274 64.2
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 2.4e-81 306.2 269 63.6
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 5.4e-81 305.1 275 61.8
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 9.3e-81 304.3 235 69.4
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.2e-80 303.9 185 84.3
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 2.1e-80 303.1 283 64.0
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 2.7e-80 302.8 247 65.2
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 2.7e-80 302.8 204 77.5
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 4.6e-80 302.0 266 63.9
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 6.0e-80 301.6 186 82.8
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 1.3e-79 300.4 185 81.6
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 1.3e-79 300.4 274 61.7
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 2.3e-79 299.7 185 81.6
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 2.3e-79 299.7 197 78.2
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 2.3e-79 299.7 268 66.0
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 3.0e-79 299.3 266 62.4
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 6.7e-79 298.1 241 67.2
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 1.5e-78 297.0 262 64.9
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 2.5e-78 296.2 270 63.3
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 3.3e-78 295.8 195 78.5
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 3.3e-78 295.8 195 77.9
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 4.3e-78 295.4 266 61.3
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 1.5e-75 287.0 269 61.3
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 2.0e-75 286.6 188 78.2
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 9.9e-75 284.3 201 75.6
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 1.3e-74 283.9 219 71.2
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 3.8e-74 282.3 185 77.3
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 4.9e-74 282.0 255 62.4
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 1.1e-73 280.8 185 76.2
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 1.8e-68 263.5 235 62.1
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 2.4e-68 263.1 267 58.8
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 1.7e-66 256.9 189 68.3
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.5e-65 253.1 199 70.4
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 9.7e-62 241.1 192 64.1
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 1.4e-60 237.3 234 53.8
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.7e-58 230.3 197 58.9
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 4.6e-56 222.2 195 64.6
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 2.2e-53 213.4 140 78.6
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 5.9e-51 205.3 272 48.5
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 2.5e-49 199.9 126 81.7
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 2.4e-44 183.3 192 51.0
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 2.0e-43 180.3 129 72.1
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.7e-42 177.2 184 50.5
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 1.7e-42 177.2 108 81.5
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 2.2e-42 176.8 179 55.9
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 9.1e-36 154.8 108 66.7
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 1.0e-31 141.4 255 37.3
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.3e-29 134.4 155 56.8
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.3e-21 107.8 82 65.9
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 1.7e-21 107.5 71 80.3
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 5.0e-18 95.9 93 61.3
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 2.0e-14 84.0 45 95.6
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 1.3e-13 81.3 47 78.7
BcaB01g05146 Brassica carinata HOM05D039718 ORTHO05D031954 4.1e-12 76.3 105 47.6
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.6e-11 74.3 65 64.6


User provided reference genes

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