Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 5.4e-162 574.3 300 100.0
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 1.1e-141 506.9 304 89.8
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 6.8e-141 504.2 304 87.5
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 4.9e-139 498.0 306 87.6
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 7.6e-132 474.2 308 82.5
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 4.3e-127 458.4 261 93.1
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 2.4e-125 452.6 296 82.1
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 3.1e-125 452.2 304 80.9
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 4.5e-124 448.4 305 81.3
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 7.6e-124 447.6 293 81.2
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.3e-123 446.8 304 80.9
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 2.1e-118 429.5 283 81.3
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 2.5e-111 406.0 281 79.0
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 3.7e-94 349.0 312 61.9
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 1.8e-85 320.1 330 61.2
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 5.5e-82 308.5 294 55.8
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 1.2e-81 307.4 274 59.1
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 5.2e-80 302.0 264 59.1
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 6.7e-80 301.6 308 53.2
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 3.3e-79 299.3 277 57.0
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 2.8e-78 296.2 262 57.3
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 4.8e-78 295.4 258 59.7
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 6.3e-78 295.0 257 58.8
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 6.3e-78 295.0 259 59.8
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.2e-76 290.8 296 54.1
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 1.6e-76 290.4 259 58.3
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 2.0e-76 290.0 260 58.5
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 2.7e-76 289.7 255 60.4
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 2.7e-76 289.7 265 56.6
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 3.5e-76 289.3 262 56.5
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 3.5e-76 289.3 252 59.9
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 4.5e-76 288.9 254 59.4
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 7.7e-76 288.1 260 58.5
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 7.7e-76 288.1 291 51.9
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 7.7e-76 288.1 253 59.3
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 5.0e-75 285.4 289 52.9
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 8.5e-75 284.6 263 56.7
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.1e-74 284.3 258 55.4
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 2.5e-74 283.1 190 71.1
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 2.5e-74 283.1 248 61.3
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 2.5e-74 283.1 257 54.9
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 3.2e-74 282.7 271 54.6
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 4.2e-74 282.3 258 54.7
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 5.5e-74 282.0 248 59.3
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 7.2e-74 281.6 258 54.7
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 9.4e-74 281.2 247 60.7
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 9.4e-74 281.2 190 71.1
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 4.7e-73 278.9 251 58.2
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 6.1e-73 278.5 251 59.4
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 2.3e-72 276.6 252 57.5
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 2.3e-72 276.6 256 55.1
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 5.2e-72 275.4 195 68.7
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 6.8e-72 275.0 195 68.2
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 7.5e-71 271.6 269 55.0
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 7.5e-71 271.6 278 52.2
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 1.7e-70 270.4 261 56.3
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 1.4e-69 267.3 281 52.0
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 1.8e-69 266.9 246 54.1
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 1.8e-69 266.9 250 57.2
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 5.4e-69 265.4 200 67.5
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 2.7e-68 263.1 189 65.1
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 4.5e-68 262.3 308 51.6
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 5.9e-68 261.9 252 53.6
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 1.7e-67 260.4 303 49.8
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 8.5e-67 258.1 264 55.7
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.5e-66 257.3 307 47.9
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.9e-66 256.9 267 52.1
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 2.5e-66 256.5 303 48.2
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 3.6e-65 252.7 244 52.9
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 2.2e-62 243.4 246 53.3
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 4.9e-62 242.3 265 50.2
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 3.1e-61 239.6 308 46.4
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 1.0e-59 234.6 212 54.2
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.5e-58 230.7 267 48.7
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 1.9e-58 230.3 256 49.2
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 3.3e-58 229.6 405 38.0
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 5.6e-58 228.8 272 48.9
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 9.5e-58 228.0 267 49.4
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 2.1e-57 226.9 190 61.1
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 2.8e-57 226.5 283 45.9
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 1.2e-55 221.1 250 50.8
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 5.7e-55 218.8 285 48.4
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 5.7e-55 218.8 221 51.1
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 5.7e-55 218.8 142 69.7
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 2.7e-52 209.9 251 49.8
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 1.5e-50 204.1 241 42.7
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 2.5e-50 203.4 227 49.3
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 2.8e-49 199.9 193 47.2
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.0e-48 198.0 189 51.9
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 1.7e-43 180.6 251 43.0
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.6e-31 140.2 94 64.9
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 5.8e-31 139.0 164 52.4
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 7.8e-28 128.6 179 38.5
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 3.9e-27 126.3 109 56.9
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 6.6e-27 125.6 214 33.6
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 5.6e-26 122.5 102 58.8
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 1.4e-24 117.9 219 32.4
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 1.8e-24 117.5 166 43.4
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 2.4e-21 107.1 117 43.6
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 1.0e-19 101.7 202 37.1
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 3.6e-17 93.2 62 66.1
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 3.6e-17 93.2 162 38.3
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 2.4e-16 90.5 124 49.2
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.7e-14 84.3 90 47.8


User provided reference genes

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