Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G14400 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.3e-143 513.1 268 100.0
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 9.7e-46 188.0 271 45.0
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.7e-45 187.2 271 44.6
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 2.8e-45 186.4 272 43.0
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 8.2e-45 184.9 272 44.5
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 3.1e-44 183.0 271 44.6
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 2.6e-43 179.9 272 43.4
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 7.7e-43 178.3 273 42.9
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 7.7e-43 178.3 273 42.9
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 1.0e-42 177.9 273 42.9
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 5.0e-42 175.6 271 42.8
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 4.2e-41 172.6 283 40.6
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 5.5e-41 172.2 272 42.6
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 1.4e-39 167.5 266 42.5
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 8.8e-39 164.9 273 41.4
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 2.0e-38 163.7 273 41.0
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 3.3e-38 162.9 275 42.2
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 1.8e-31 140.6 281 37.0
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 2.5e-25 120.2 284 32.7
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 1.5e-22 110.9 284 32.0
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 4.4e-22 109.4 270 31.9
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 2.2e-21 107.1 272 28.7
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 2.8e-21 106.7 260 30.8
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 2.8e-21 106.7 277 30.0
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 2.8e-21 106.7 272 30.9
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 2.8e-21 106.7 271 30.3
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 6.3e-21 105.5 284 29.9
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 3.1e-20 103.2 272 29.0
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 4.1e-20 102.8 293 30.4
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 7.0e-20 102.1 255 31.0
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 7.0e-20 102.1 285 29.8
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 9.1e-20 101.7 255 31.0
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 1.2e-19 101.3 282 28.7
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 1.6e-19 100.9 284 29.2
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 1.6e-19 100.9 254 32.7
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 1.6e-19 100.9 248 32.7
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 2.0e-19 100.5 284 28.9
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 2.7e-19 100.1 284 29.6
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 2.7e-19 100.1 286 28.7
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 3.5e-19 99.8 283 30.0
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 3.5e-19 99.8 284 28.9
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 3.5e-19 99.8 247 32.0
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 7.7e-19 98.6 272 28.3
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 1.0e-18 98.2 241 30.3
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.3e-18 97.8 283 28.3
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 1.7e-18 97.4 280 28.6
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 2.3e-18 97.1 281 29.5
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 2.3e-18 97.1 252 30.6
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 3.8e-18 96.3 264 29.2
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 6.6e-18 95.5 232 31.0
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 8.6e-18 95.1 231 31.2
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 8.6e-18 95.1 281 29.5
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 8.6e-18 95.1 236 32.2
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 1.9e-17 94.0 248 31.9
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 2.5e-17 93.6 285 28.4
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 3.3e-17 93.2 251 32.3
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 4.2e-17 92.8 241 33.2
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 7.2e-17 92.0 241 33.2
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 9.5e-17 91.7 282 27.7
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 1.2e-16 91.3 295 27.8
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 1.6e-16 90.9 286 26.2
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 2.1e-16 90.5 279 27.6
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 3.6e-16 89.7 277 28.2
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 3.6e-16 89.7 217 30.4
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 3.6e-16 89.7 285 27.4
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 4.7e-16 89.4 283 29.0
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 4.7e-16 89.4 285 25.6
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.7e-16 89.4 247 28.7
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 6.1e-16 89.0 280 27.1
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 6.1e-16 89.0 280 27.1
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 6.1e-16 89.0 279 28.7
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 6.1e-16 89.0 278 28.1
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 8.0e-16 88.6 231 29.4
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 8.0e-16 88.6 300 26.3
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 1.0e-15 88.2 281 27.4
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 1.0e-15 88.2 260 28.1
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 1.4e-15 87.8 247 28.7
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 1.8e-15 87.4 280 27.5
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 4.0e-15 86.3 265 28.7
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 4.0e-15 86.3 258 27.5
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 5.2e-15 85.9 247 28.7
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 6.8e-15 85.5 271 25.8
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 6.8e-15 85.5 247 28.7
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 8.9e-15 85.1 247 28.7
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 1.5e-14 84.3 209 32.1
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 2.6e-14 83.6 251 27.1
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 3.4e-14 83.2 212 31.1
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 3.4e-14 83.2 218 28.4
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 4.4e-14 82.8 246 27.2
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 4.4e-14 82.8 218 28.4
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 4.4e-14 82.8 289 26.6
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 7.5e-14 82.0 266 27.1
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 9.8e-14 81.6 254 28.0
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 9.8e-14 81.6 209 31.6
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.3e-13 81.3 259 28.2
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 1.3e-13 81.3 278 27.0
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 1.7e-13 80.9 254 28.7
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 2.2e-13 80.5 250 29.2
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 8.3e-13 78.6 257 28.0
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 8.3e-13 78.6 248 27.8
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 8.3e-13 78.6 278 27.7
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 8.3e-13 78.6 282 25.9
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 1.8e-12 77.4 277 26.4
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 2.4e-12 77.0 216 27.3
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 4.1e-12 76.3 251 27.9
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 9.2e-12 75.1 290 23.8
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 1.6e-11 74.3 210 29.5
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 2.0e-11 73.9 261 28.4
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 7.8e-11 72.0 284 23.9
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 1.9e-09 67.4 284 26.1
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 2.5e-09 67.0 210 28.1
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 2.1e-08 63.9 261 26.1
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 6.1e-08 62.4 255 24.7
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 3.4e-06 56.6 265 24.9
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 3.4e-06 56.6 212 27.4
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 4.4e-06 56.2 292 24.0


User provided reference genes

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