Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G12880 Arabidopsis lyrata HOM05D020304 ORTHO05D021442 1.8e-67 259.2 141 100.0
AT2G03230 Arabidopsis thaliana HOM05D020304 ORTHO05D021442 9.0e-51 203.8 136 77.9
Carub.0005s0215 Capsella rubella HOM05D020304 ORTHO05D021442 2.8e-36 155.6 99 78.8
CARHR145560 Cardamine hirsuta HOM05D020304 ORTHO05D021442 6.3e-20 101.3 95 51.6
Thhalv10005267m.g Eutrema salsugineum HOM05D020304 ORTHO05D021442 6.3e-20 101.3 128 45.3
Sp2g14160 Schrenkiella parvula HOM05D020304 ORTHO05D021442 2.0e-10 69.7 133 38.3
BcaC04g19944 Brassica carinata HOM05D015339 ORTHO05D003858 3.8e-09 65.5 118 33.9
A10p15050 Brassica napus HOM05D015339 ORTHO05D003858 3.8e-09 65.5 118 35.6
BolC9t57805H Brassica oleracea HOM05D015339 ORTHO05D003858 3.8e-09 65.5 118 33.9
AT5G57570 Arabidopsis thaliana HOM05D003879 ORTHO05D003858 5.0e-09 65.1 116 39.7
BraA10t43587Z Brassica rapa HOM05D015339 ORTHO05D003858 5.0e-09 65.1 118 35.6
C09p49520 Brassica napus HOM05D015339 ORTHO05D003858 1.9e-08 63.2 118 33.1
BcaB08g36120 Brassica carinata HOM05D015339 ORTHO05D003858 3.2e-08 62.4 106 33.0
Carub.0008s1815 Capsella rubella HOM05D003879 ORTHO05D003858 4.2e-08 62.0 102 37.3
Aa31LG1G980 Aethionema arabicum HOM05D003879 ORTHO05D003858 1.2e-07 60.5 132 32.6
Manes.01G033400 Manihot esculenta HOM05D003879 ORTHO05D003858 2.7e-07 59.3 76 42.1
AT5G57640 Arabidopsis thaliana HOM05D003879 ORTHO05D003858 3.6e-07 58.9 83 37.3
Lalb_Chr09g0329191 Lupinus albus HOM05D003879 ORTHO05D003858 6.1e-07 58.2 92 35.9
Lsat_1_v5_gn_4_10781 Lactuca sativa HOM05D003879 ORTHO05D003858 1.8e-06 56.6 130 33.1
Thhalv10014953m.g Eutrema salsugineum HOM05D015339 ORTHO05D003858 3.0e-06 55.8 110 31.8
Ciclev10033434m.g Citrus clementina HOM05D003879 ORTHO05D003858 4.0e-06 55.5 116 32.8
CAN.G964.6 Capsicum annuum HOM05D003879 ORTHO05D003858 5.2e-06 55.1 86 37.2
ECA234G2637 Erigeron canadensis HOM05D003879 ORTHO05D003858 5.2e-06 55.1 93 40.9
HanXRQChr12g0361951 Helianthus annuus HOM05D003879 ORTHO05D003858 5.2e-06 55.1 98 33.7
PGR119G2196 Punica granatum HOM05D003879 ORTHO05D003858 6.7e-06 54.7 76 38.2
vmacro16344 Vaccinium macrocarpon HOM05D003879 ORTHO05D003858 8.8e-06 54.3 135 31.1


User provided reference genes

Program Settings