Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 3.2e-170 601.7 306 100.0
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 3.4e-156 555.1 306 92.5
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 2.8e-150 535.4 313 90.4
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 3.7e-150 535.0 314 90.1
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 6.3e-150 534.3 310 90.6
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 1.2e-148 530.0 313 90.1
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 1.2e-148 530.0 313 90.1
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 1.2e-148 530.0 313 90.1
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 2.8e-134 482.3 306 84.0
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 4.9e-126 454.9 256 87.5
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 2.9e-123 445.7 263 87.1
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 1.9e-122 443.0 223 99.6
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 9.8e-119 430.6 277 76.9
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 3.2e-117 425.6 261 79.3
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 1.6e-116 423.3 282 75.5
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 3.5e-116 422.2 265 76.6
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 1.0e-115 420.6 268 78.0
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.0e-115 420.6 282 75.2
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 8.6e-115 417.5 266 76.7
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 8.6e-115 417.5 278 73.7
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.1e-114 417.2 294 72.1
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 2.5e-114 416.0 280 74.3
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 3.3e-114 415.6 285 73.3
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 5.6e-114 414.8 269 75.8
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 5.6e-114 414.8 274 75.2
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 2.1e-113 412.9 271 74.5
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 3.6e-113 412.1 296 72.0
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 8.0e-113 411.0 281 73.0
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 1.1e-112 410.6 264 76.1
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 1.4e-112 410.2 306 69.6
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.4e-112 410.2 284 72.5
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.8e-112 409.8 271 73.8
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 1.8e-112 409.8 283 74.6
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 6.8e-112 407.9 281 73.0
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.2e-111 407.1 263 77.6
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 2.0e-111 406.4 252 79.0
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 2.0e-111 406.4 287 72.8
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 4.4e-111 405.2 275 74.2
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 5.8e-111 404.8 281 73.7
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 7.5e-111 404.4 267 75.3
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.2e-110 402.9 246 80.9
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 6.4e-110 401.4 246 80.5
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 6.4e-110 401.4 244 81.1
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 8.3e-110 401.0 267 74.9
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 1.1e-109 400.6 263 76.4
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 1.1e-109 400.6 267 74.9
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.1e-109 400.6 254 78.0
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 1.1e-109 400.6 252 78.6
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.4e-109 400.2 259 74.5
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.4e-109 400.2 265 75.1
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 1.9e-109 399.8 277 73.3
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 2.4e-109 399.4 273 73.3
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 5.4e-109 398.3 268 75.0
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 5.4e-109 398.3 267 74.2
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 7.0e-109 397.9 285 68.8
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 6.0e-108 394.8 269 74.0
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 6.0e-108 394.8 287 70.0
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 7.8e-108 394.4 244 83.6
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.3e-107 393.7 278 69.8
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 3.9e-107 392.1 282 69.1
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 6.6e-107 391.3 249 76.7
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 8.6e-107 391.0 256 73.8
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.1e-106 390.6 246 76.0
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 7.3e-106 387.9 266 73.3
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 4.7e-105 385.2 250 75.2
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 2.9e-102 375.9 292 67.1
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.1e-100 369.8 249 74.3
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 6.0e-100 368.2 264 71.6
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 1.1e-98 364.0 229 76.9
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 2.8e-97 359.4 252 70.2
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 5.2e-96 355.1 233 75.1
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 1.9e-93 346.7 217 84.8
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 2.7e-92 342.8 219 77.6
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 2.7e-92 342.8 267 66.3
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 3.5e-92 342.4 334 54.2
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 6.0e-92 341.7 221 74.2
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 2.5e-90 336.3 244 67.6
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 8.1e-89 331.3 254 62.6
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 8.1e-89 331.3 219 73.5
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.7e-86 323.6 208 74.5
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 1.7e-86 323.6 205 74.6
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 6.4e-86 321.6 213 72.3
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 2.5e-82 309.7 260 60.0
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 9.6e-82 307.8 275 59.3
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 4.8e-81 305.4 196 74.5
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 5.8e-79 298.5 254 60.2
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 3.2e-77 292.7 309 54.4
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 3.5e-76 289.3 280 52.1
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 4.6e-76 288.9 167 80.2
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 4.6e-76 288.9 276 54.7
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 3.0e-75 286.2 208 70.2
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 5.5e-69 265.4 191 67.5
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.1e-68 263.5 246 53.7
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 3.9e-67 259.2 209 64.1
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 2.5e-66 256.5 228 57.0
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 2.0e-63 246.9 226 56.2
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.7e-62 243.8 181 66.3
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.3e-59 234.2 262 47.3
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 1.7e-49 200.7 157 65.0
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 5.0e-46 189.1 128 71.1
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 6.5e-46 188.7 259 45.2
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.7e-44 183.3 94 98.9
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 8.8e-35 151.8 92 82.6
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 6.5e-30 135.6 107 61.7
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 3.7e-25 119.8 98 53.1
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.2e-22 110.5 131 46.6
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 6.5e-22 109.0 142 43.7
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 6.1e-20 102.4 77 66.2
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 2.6e-18 97.1 60 80.0
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 4.4e-18 96.3 98 48.0
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 5.7e-18 95.9 56 78.6
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 2.1e-12 77.4 218 28.9
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 8.9e-11 72.0 51 68.6
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 3.7e-09 66.6 47 63.8
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 3.7e-09 66.6 41 73.2
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 5.4e-08 62.8 201 26.4
Ciclev10003790m.g Citrus clementina HOM05D006925 ORTHO05D008830 7.0e-08 62.4 35 88.6
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 7.8e-07 58.9 54 53.7


User provided reference genes

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