Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G46550 Arabidopsis lyrata HOM05D008602 ORTHO05D012039 2.3e-122 442.2 217 100.0
AT2G47050 Arabidopsis thaliana HOM05D008602 ORTHO05D012039 2.2e-120 435.6 217 98.2
Carub.0004s2979 Capsella rubella HOM05D008602 ORTHO05D012039 8.8e-114 413.7 217 92.2
CARHR142410 Cardamine hirsuta HOM05D008602 ORTHO05D012039 8.8e-114 413.7 217 94.0
Sp4g29040 Schrenkiella parvula HOM05D008602 ORTHO05D012039 4.8e-112 407.9 217 92.6
Thhalv10001629m.g Eutrema salsugineum HOM05D008602 ORTHO05D012039 1.1e-111 406.8 217 92.6
BcaB06g29463 Brassica carinata HOM05D008602 ORTHO05D012039 1.4e-103 379.8 217 85.3
BraA05t19079Z Brassica rapa HOM05D008602 ORTHO05D012039 1.8e-103 379.4 217 85.3
A05p00750 Brassica napus HOM05D008602 ORTHO05D012039 2.4e-103 379.0 217 85.3
A04p34790 Brassica napus HOM05D008602 ORTHO05D012039 3.1e-103 378.6 215 84.7
BraA04t18934Z Brassica rapa HOM05D008602 ORTHO05D012039 3.1e-103 378.6 215 84.7
BcaC01g05047 Brassica carinata HOM05D008602 ORTHO05D012039 9.1e-103 377.1 215 85.1
C03p30770 Brassica napus HOM05D008602 ORTHO05D012039 9.1e-103 377.1 215 85.1
BolC3t15427H Brassica oleracea HOM05D008602 ORTHO05D012039 9.1e-103 377.1 215 85.1
BraA03t11797Z Brassica rapa HOM05D008602 ORTHO05D012039 2.0e-102 375.9 215 84.7
A03p25830 Brassica napus HOM05D008602 ORTHO05D012039 4.5e-102 374.8 215 84.2
BcaC02g09027 Brassica carinata HOM05D008602 ORTHO05D012039 5.9e-102 374.4 217 83.9
C04p00910 Brassica napus HOM05D008602 ORTHO05D012039 5.9e-102 374.4 217 83.9
C04p72560 Brassica napus HOM05D008602 ORTHO05D012039 5.9e-102 374.4 215 84.2
BolC4t21729H Brassica oleracea HOM05D008602 ORTHO05D012039 5.9e-102 374.4 217 83.9
BolC4t28744H Brassica oleracea HOM05D008602 ORTHO05D012039 5.9e-102 374.4 215 84.2
Aa31LG1G28390 Aethionema arabicum HOM05D008602 ORTHO05D012039 2.1e-91 339.3 217 76.0
THA.LOC104817438 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 2.8e-67 259.2 226 59.7
THA.LOC104802122 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 8.1e-67 257.7 227 59.0
THA.LOC104827651 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 1.8e-66 256.5 228 60.1
BraA07t30237Z Brassica rapa HOM05D008602 ORTHO05D013475 4.4e-65 251.9 219 60.3
A07p25900 Brassica napus HOM05D008602 ORTHO05D013475 7.6e-65 251.1 219 59.8
C06p28150 Brassica napus HOM05D008602 ORTHO05D013475 1.6e-62 243.4 219 58.4
BolC6t37981H Brassica oleracea HOM05D008602 ORTHO05D013475 1.6e-62 243.4 219 58.4
Thhalv10006384m.g Eutrema salsugineum HOM05D008602 ORTHO05D013475 2.1e-62 243.0 218 57.8
AL5G44930 Arabidopsis lyrata HOM05D008602 ORTHO05D013475 4.3e-60 235.3 218 56.4
Sp5g01200 Schrenkiella parvula HOM05D008602 ORTHO05D013475 5.6e-60 235.0 220 57.3
AT3G62180 Arabidopsis thaliana HOM05D008602 ORTHO05D013475 6.2e-59 231.5 218 55.5
CARHR172520 Cardamine hirsuta HOM05D008602 ORTHO05D013475 6.2e-59 231.5 219 57.1
BolC8t51290H Brassica oleracea HOM05D008602 ORTHO05D013475 2.6e-57 226.1 218 55.0
BcaC07g40710 Brassica carinata HOM05D008602 ORTHO05D013475 3.4e-57 225.7 218 55.0
A09p54250 Brassica napus HOM05D008602 ORTHO05D013475 4.4e-57 225.3 218 54.6
BraA09t40837Z Brassica rapa HOM05D008602 ORTHO05D013475 4.4e-57 225.3 218 54.6
C08p37120 Brassica napus HOM05D008602 ORTHO05D013475 7.6e-57 224.6 218 54.6
Carub.0005s2891 Capsella rubella HOM05D008602 ORTHO05D013475 4.9e-56 221.9 196 57.1
BcaC07g40708 Brassica carinata HOM05D008602 ORTHO05D013475 9.3e-55 217.6 220 52.7
BraA04t15789Z Brassica rapa HOM05D008602 ORTHO05D024467 3.5e-54 215.7 212 53.8
A04p00700 Brassica napus HOM05D008602 ORTHO05D024467 1.0e-53 214.2 212 53.3
BcaC02g10283 Brassica carinata HOM05D008602 ORTHO05D024467 1.1e-52 210.7 203 53.7
C04p30790 Brassica napus HOM05D008602 ORTHO05D024467 1.1e-52 210.7 203 53.7
BcaB02g07346 Brassica carinata HOM05D008602 ORTHO05D013475 4.3e-52 208.8 219 52.5
BolC4t24598H Brassica oleracea HOM05D008602 ORTHO05D024467 5.6e-52 208.4 203 53.2
Aa31LG10G16140 Aethionema arabicum HOM05D000036 ORTHO05D000441 1.3e-51 207.2 198 55.1
BcaB02g08120 Brassica carinata HOM05D000703 ORTHO05D000633 1.1e-26 124.4 145 47.6
A09p54240 Brassica napus HOM05D000036 ORTHO05D000441 9.1e-18 94.7 185 29.7
BraA09t40836Z Brassica rapa HOM05D000036 ORTHO05D000441 9.1e-18 94.7 185 29.7
BcaC07g40707 Brassica carinata HOM05D000036 ORTHO05D000441 4.5e-17 92.4 170 30.6
C08p37110 Brassica napus HOM05D000036 ORTHO05D000441 4.5e-17 92.4 170 30.6
BolC8t51289H Brassica oleracea HOM05D000036 ORTHO05D000441 5.9e-17 92.0 170 30.0
BcaB02g07347 Brassica carinata HOM05D000036 ORTHO05D000441 3.8e-16 89.4 171 30.4
C06p28140 Brassica napus HOM05D000036 ORTHO05D000441 8.5e-16 88.2 171 30.4
BolC6t37980H Brassica oleracea HOM05D000036 ORTHO05D000441 8.5e-16 88.2 171 30.4
A07p25890 Brassica napus HOM05D000036 ORTHO05D000441 1.1e-15 87.8 171 29.8
BraA07t30236Z Brassica rapa HOM05D000036 ORTHO05D000441 1.1e-15 87.8 171 29.8
Thhalv10005855m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 1.9e-15 87.0 191 28.3
Carub.0005s2890 Capsella rubella HOM05D000036 ORTHO05D000441 5.5e-15 85.5 165 29.7
AL5G44920 Arabidopsis lyrata HOM05D000036 ORTHO05D000441 9.4e-15 84.7 152 32.2
BcaC02g10282 Brassica carinata HOM05D000036 ORTHO05D000441 9.4e-15 84.7 165 28.5
A04p00710 Brassica napus HOM05D000036 ORTHO05D000441 9.4e-15 84.7 165 28.5
C04p30810 Brassica napus HOM05D000036 ORTHO05D000441 9.4e-15 84.7 165 28.5
BolC4t24601H Brassica oleracea HOM05D000036 ORTHO05D000441 9.4e-15 84.7 165 28.5
Carub.0004s2978 Capsella rubella HOM05D000036 ORTHO05D000441 9.4e-15 84.7 206 27.2
BcaB02g08121 Brassica carinata HOM05D000036 ORTHO05D000441 1.2e-14 84.3 165 29.1
A05p00770 Brassica napus HOM05D000036 ORTHO05D000441 1.2e-14 84.3 179 29.1
BraA05t19080Z Brassica rapa HOM05D000036 ORTHO05D000441 1.2e-14 84.3 179 29.1
A04p34780 Brassica napus HOM05D000036 ORTHO05D000441 2.1e-14 83.6 189 28.0
C04p72550 Brassica napus HOM05D000036 ORTHO05D000441 2.1e-14 83.6 189 28.0
BolC4t28743H Brassica oleracea HOM05D000036 ORTHO05D000441 2.1e-14 83.6 189 28.0
BraA04t15791Z Brassica rapa HOM05D000036 ORTHO05D000441 2.1e-14 83.6 165 27.9
BraA04t18933Z Brassica rapa HOM05D000036 ORTHO05D000441 2.1e-14 83.6 189 28.0
Sp5g01210 Schrenkiella parvula HOM05D000036 ORTHO05D000441 2.7e-14 83.2 165 28.5
AT3G62170 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 3.6e-14 82.8 152 31.6
AT2G47040 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 6.1e-14 82.0 208 26.4
Sp4g29030 Schrenkiella parvula HOM05D000036 ORTHO05D000441 6.1e-14 82.0 206 25.7
Carub.0004s2977 Capsella rubella HOM05D000036 ORTHO05D000441 1.0e-13 81.3 179 29.1
CARHR172510 Cardamine hirsuta HOM05D000036 ORTHO05D000441 1.0e-13 81.3 152 29.6
Thhalv10001369m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 1.0e-13 81.3 192 27.1
BcaB06g29464 Brassica carinata HOM05D000036 ORTHO05D000441 1.4e-13 80.9 163 28.8
BcaB01g03192 Brassica carinata HOM05D000036 ORTHO05D000441 5.1e-13 79.0 200 26.5
C04p00930 Brassica napus HOM05D000036 ORTHO05D000441 3.3e-12 76.3 179 27.9
BolC4t21731H Brassica oleracea HOM05D000036 ORTHO05D000441 3.3e-12 76.3 179 27.9
CARHR142400 Cardamine hirsuta HOM05D000036 ORTHO05D000441 4.4e-12 75.9 202 26.2
AL4G46540 Arabidopsis lyrata HOM05D008602 ORTHO05D000441 5.7e-12 75.5 198 27.3
AT2G47030 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 9.7e-12 74.7 188 27.7
Cpa.g.sc41.94 Carica papaya HOM05D000036 ORTHO05D000441 1.3e-11 74.3 170 23.5
BcaC01g05049 Brassica carinata HOM05D000036 ORTHO05D000441 6.3e-11 72.0 194 25.8
C03p30760 Brassica napus HOM05D000036 ORTHO05D000441 6.3e-11 72.0 194 25.8
A03p25820 Brassica napus HOM05D000036 ORTHO05D000441 1.1e-10 71.2 194 25.8
BolC3t15426H Brassica oleracea HOM05D000036 ORTHO05D000441 1.1e-10 71.2 194 25.8
BraA03t11796Z Brassica rapa HOM05D000036 ORTHO05D000441 1.1e-10 71.2 194 25.8
THA.LOC104817436 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 2.4e-10 70.1 152 28.3
THA.LOC104802121 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 7.7e-09 65.1 178 24.7
Aa31LG1G28380 Aethionema arabicum HOM05D002601 ORTHO05D002884 2.5e-07 60.1 175 24.0
Peaxi162Scf00750g00057 Petunia axillaris HOM05D000036 ORTHO05D000441 7.2e-07 58.5 202 22.8
Lj5g0002768 Lotus japonicus HOM05D000036 ORTHO05D000441 4.7e-06 55.8 222 23.0
Phvul.001G217400 Phaseolus vulgaris HOM05D000036 ORTHO05D000441 4.7e-06 55.8 200 22.5


User provided reference genes

Program Settings