Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 0.0e+00 1173.7 635 100.0
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 8.1e-309 1063.1 636 89.9
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 4.0e-300 1034.2 636 88.7
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 3.6e-272 941.4 639 79.0
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 4.8e-269 931.0 644 80.6
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 4.4e-254 881.3 647 76.0
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 1.6e-251 872.8 634 76.8
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 1.1e-228 797.0 644 71.7
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 5.0e-226 788.1 643 71.9
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 1.7e-221 773.1 650 65.7
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 3.7e-221 771.9 626 72.7
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 7.5e-206 721.1 637 63.0
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 9.9e-206 720.7 643 62.4
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 1.7e-205 719.9 638 61.4
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 3.0e-202 709.1 645 61.9
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 9.5e-201 704.1 644 68.3
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.5e-198 696.8 643 60.7
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 4.9e-197 691.8 643 60.0
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 4.1e-196 688.7 643 60.2
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.2e-195 687.2 631 60.1
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 3.0e-194 682.6 595 62.0
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 3.9e-194 682.2 648 59.7
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 5.6e-193 678.3 624 61.1
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 9.0e-191 671.0 630 60.0
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 5.8e-190 668.3 588 60.0
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.1e-188 664.1 630 59.2
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 9.3e-188 661.0 642 55.6
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 2.7e-187 659.4 646 57.3
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.7e-186 656.8 595 59.2
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 5.1e-186 655.2 646 57.0
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 1.2e-182 644.0 627 57.4
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 2.0e-182 643.3 644 56.4
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 7.6e-182 641.3 650 55.8
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 8.4e-181 637.9 639 57.4
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.1e-180 637.5 618 56.8
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.9e-180 636.7 674 54.7
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 2.4e-180 636.3 651 55.1
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 3.2e-180 636.0 637 56.2
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.6e-179 633.6 630 59.2
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 6.0e-179 631.7 654 54.6
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 3.0e-178 629.4 674 54.3
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 8.7e-178 627.9 638 56.0
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 1.1e-177 627.5 639 53.8
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.1e-177 627.5 639 53.8
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 5.6e-177 625.2 639 55.4
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.6e-176 623.6 630 56.2
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.1e-176 623.2 634 54.7
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.1e-175 620.9 644 56.7
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 5.3e-175 618.6 634 55.0
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 6.9e-175 618.2 633 55.5
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-174 617.5 634 55.0
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 1.5e-174 617.1 636 53.9
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 2.0e-174 616.7 656 52.6
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 4.5e-174 615.5 638 55.0
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.6e-174 614.8 643 53.8
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 7.6e-174 614.8 648 53.5
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.2e-173 613.2 646 56.0
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.2e-173 613.2 646 56.0
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.4e-172 610.5 634 54.1
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 1.9e-172 610.1 642 54.0
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 2.4e-172 609.8 644 53.3
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 9.3e-172 607.8 651 54.2
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.6e-171 607.1 640 53.1
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.6e-171 607.1 639 52.9
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 1.6e-171 607.1 656 52.7
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 2.1e-171 606.7 646 52.5
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 4.6e-171 605.5 636 54.1
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 4.6e-171 605.5 693 51.2
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.9e-171 604.7 635 54.0
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.3e-170 604.0 643 54.4
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 2.3e-170 603.2 653 54.2
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.9e-170 602.4 638 52.5
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.9e-170 602.4 638 52.5
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 6.7e-170 601.7 653 50.8
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 8.7e-170 601.3 640 52.0
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.5e-169 600.5 649 51.3
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 1.6e-168 597.0 641 54.0
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 2.1e-168 596.7 654 50.8
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 4.0e-167 592.4 518 56.6
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 1.5e-166 590.5 644 50.9
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 2.0e-166 590.1 491 60.1
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 2.6e-166 589.7 639 51.8
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 1.3e-165 587.4 617 51.5
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 2.5e-164 583.2 646 51.9
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 4.2e-164 582.4 658 49.2
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 5.5e-164 582.0 654 50.6
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 9.3e-164 581.3 674 48.5
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 4.1e-159 565.8 637 49.6
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.2e-158 564.3 578 53.1
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 1.0e-157 561.2 593 50.4
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 2.9e-157 559.7 419 64.9
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-155 554.3 464 58.6
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 7.9e-155 551.6 644 49.4
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 3.9e-154 549.3 627 48.5
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 3.8e-149 532.7 629 49.9
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 7.9e-147 525.0 550 55.1
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 5.7e-145 518.8 624 48.4
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 3.2e-140 503.1 630 46.0
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 7.2e-140 501.9 391 59.6
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 1.0e-138 498.0 344 68.6
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.3e-117 427.9 341 58.9
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 5.7e-113 412.5 529 42.9
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 6.3e-112 409.1 503 44.3
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 4.1e-111 406.4 498 44.8
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 1.1e-108 398.3 532 43.2
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 5.4e-103 379.4 587 39.4
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 1.1e-100 371.7 507 41.6
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 3.1e-74 283.9 523 35.0
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 5.3e-74 283.1 680 29.1
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 2.0e-57 228.0 458 32.8
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 6.9e-50 203.0 537 27.7
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 7.2e-39 166.4 432 27.8
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 5.3e-34 150.2 100 74.0
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 5.3e-34 150.2 100 74.0
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.4e-31 142.1 98 72.4
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.2e-17 95.9 499 22.0


User provided reference genes

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