Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G45210 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 7.9e-149 530.4 266 100.0
Carub.0004s2868 Capsella rubella HOM05D001925 ORTHO05D004257 6.7e-132 474.2 266 88.7
AT2G45980 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 7.4e-131 470.7 261 92.3
Sp4g28050 Schrenkiella parvula HOM05D001925 ORTHO05D004257 1.2e-117 426.8 271 79.0
Thhalv10001583m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 1.4e-116 423.3 275 79.6
CARHR141250 Cardamine hirsuta HOM05D001925 ORTHO05D004257 4.5e-112 408.3 268 79.5
BraA05t19560Z Brassica rapa HOM05D001925 ORTHO05D004257 3.3e-94 349.0 267 71.5
A05p05970 Brassica napus HOM05D001925 ORTHO05D004257 7.3e-94 347.8 267 71.2
C04p06900 Brassica napus HOM05D001925 ORTHO05D004257 4.7e-85 318.5 279 67.0
BolC4t22311H Brassica oleracea HOM05D001925 ORTHO05D004257 4.7e-85 318.5 279 67.0
A04p34180 Brassica napus HOM05D001925 ORTHO05D004257 1.4e-84 317.0 263 66.5
BraA04t18879Z Brassica rapa HOM05D001925 ORTHO05D004257 1.4e-84 317.0 263 66.5
C04p71970 Brassica napus HOM05D001925 ORTHO05D004257 5.8e-83 311.6 263 66.2
Aa31LG1G27390 Aethionema arabicum HOM05D001925 ORTHO05D004257 2.9e-82 309.3 272 62.5
BolC4t28695H Brassica oleracea HOM05D001925 ORTHO05D004257 3.4e-75 285.8 268 61.9
THA.LOC104817300 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 3.2e-73 279.3 275 55.6
THA.LOC104802035 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 2.8e-61 239.6 265 49.4
Cpa.g.sc11.19 Carica papaya HOM05D001925 ORTHO05D004257 1.4e-57 227.3 292 47.3
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 3.2e-57 226.1 311 44.7
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 7.9e-56 221.5 291 47.8
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 2.3e-55 219.9 277 44.0
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.9e-54 216.9 294 45.2
THA.LOC104825845 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 2.5e-54 216.5 290 44.8
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 4.3e-54 215.7 304 45.1
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 1.3e-53 214.2 305 43.9
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 2.8e-53 213.0 314 43.3
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 6.2e-53 211.8 290 48.3
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 6.2e-53 211.8 316 41.1
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 1.8e-52 210.3 311 44.4
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 3.1e-52 209.5 313 46.3
Aa31LG5G590 Aethionema arabicum HOM05D001925 ORTHO05D004257 5.3e-52 208.8 297 42.8
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 6.9e-52 208.4 303 43.9
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 9.0e-52 208.0 309 43.4
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 1.2e-51 207.6 315 42.5
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 1.2e-51 207.6 312 43.3
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 1.2e-51 207.6 316 44.9
Potri.014G086000 Populus trichocarpa HOM05D001925 ORTHO05D004257 4.5e-51 205.7 307 42.7
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 7.6e-51 204.9 303 43.9
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.7e-50 203.8 286 43.7
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 1.7e-50 203.8 311 40.5
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 6.4e-50 201.8 315 43.8
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 1.1e-49 201.1 318 42.1
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 2.4e-49 199.9 318 41.5
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 2.4e-49 199.9 313 42.2
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 2.4e-49 199.9 314 42.7
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 2.4e-49 199.9 305 43.3
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 3.2e-49 199.5 316 43.7
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 5.5e-49 198.7 313 42.2
Sp6g00430 Schrenkiella parvula HOM05D001925 ORTHO05D004257 5.5e-49 198.7 296 43.2
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 7.1e-49 198.4 292 43.2
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 1.6e-48 197.2 320 41.9
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 2.1e-48 196.8 308 41.6
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 4.6e-48 195.7 316 41.5
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 4.6e-48 195.7 312 39.7
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 4.6e-48 195.7 318 40.6
Thhalv10029186m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 6.0e-48 195.3 296 43.6
Sed0006621 Sechium edule HOM05D001925 ORTHO05D004257 7.9e-48 194.9 297 41.8
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 1.0e-47 194.5 314 41.1
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 1.8e-47 193.7 310 38.4
Eucgr.D02304 Eucalyptus grandis HOM05D001925 ORTHO05D004257 3.0e-47 193.0 307 41.4
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 3.9e-47 192.6 311 40.8
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 6.7e-47 191.8 308 40.6
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 6.7e-47 191.8 326 40.2
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 8.7e-47 191.4 314 40.8
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 8.7e-47 191.4 315 40.6
CARHR248450 Cardamine hirsuta HOM05D001925 ORTHO05D004257 1.9e-46 190.3 281 43.4
GSVIVG01026948001 Vitis vinifera HOM05D001925 ORTHO05D004257 1.9e-46 190.3 273 44.3
Potri.002G160700 Populus trichocarpa HOM05D001925 ORTHO05D004257 5.6e-46 188.7 307 40.1
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 7.4e-46 188.3 318 41.8
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 7.4e-46 188.3 318 41.8
MD01G1065100 Malus domestica HOM05D001925 ORTHO05D004257 9.6e-46 188.0 333 40.8
Sabra02G0127500 Salix brachista HOM05D001925 ORTHO05D004257 1.3e-45 187.6 306 39.9
Sc26g0000880 Simmondsia chinensis HOM05D001925 ORTHO05D004257 1.3e-45 187.6 276 42.4
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 1.3e-45 187.6 320 39.1
ClCG05G001470 Citrullus lanatus HOM05D001925 ORTHO05D004257 1.6e-45 187.2 305 40.7
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.1e-45 186.8 315 41.6
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 3.7e-45 186.0 314 42.0
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.7e-45 186.0 318 41.5
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 3.7e-45 186.0 321 40.8
MD07G1135300 Malus domestica HOM05D001925 ORTHO05D004257 4.8e-45 185.7 322 41.6
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 4.8e-45 185.7 276 42.8
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 8.2e-45 184.9 312 41.7
MELO3C006104.2 Cucumis melo HOM05D001925 ORTHO05D004257 8.2e-45 184.9 301 41.5
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 8.2e-45 184.9 318 41.2
CsaV3_3G008850 Cucumis sativus L. HOM05D001925 ORTHO05D004257 1.1e-44 184.5 306 41.8
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.1e-44 184.5 318 41.2
THA.LOC104817027 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 3.1e-44 183.0 254 44.5
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 4.0e-44 182.6 318 41.5
CiPaw.01G062900 Carya illinoinensis HOM05D001925 ORTHO05D004257 5.3e-44 182.2 282 42.2
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 5.3e-44 182.2 321 38.9
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 6.9e-44 181.8 310 40.0
Ah.05g180510 Amaranthus hybridus HOM05D001925 ORTHO05D004257 1.2e-43 181.0 309 39.8
Sed0020685 Sechium edule HOM05D001925 ORTHO05D004257 2.0e-43 180.3 292 41.8
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 4.5e-43 179.1 318 38.7
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 5.8e-43 178.7 318 40.3
AL6G53090 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 1.0e-42 177.9 281 40.2
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 1.3e-42 177.6 308 40.3
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 2.9e-42 176.4 336 37.5
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 2.9e-42 176.4 307 38.8
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 4.9e-42 175.6 241 48.1
AT4G00355 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 6.5e-42 175.3 269 41.6
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 6.5e-42 175.3 267 43.4
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 6.5e-42 175.3 237 43.5
Nitab4.5_0008206g0010 Nicotiana tabacum HOM05D001925 ORTHO05D004257 3.2e-41 172.9 315 36.5
Carub.0006s3688 Capsella rubella HOM05D001925 ORTHO05D004257 4.2e-41 172.6 283 40.3
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 1.6e-40 170.6 279 39.1
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 2.1e-40 170.2 315 36.2
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 2.7e-40 169.9 336 36.6
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 4.6e-40 169.1 283 39.6
PSO478G2649 Papaver somniferum HOM05D001925 ORTHO05D004257 6.0e-40 168.7 295 37.6
PSO782G1204 Papaver somniferum HOM05D001925 ORTHO05D004257 1.3e-39 167.5 285 39.3
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 2.3e-39 166.8 281 39.5
Aqoxy7G00278 Aquilegia oxysepala HOM05D001925 ORTHO05D004257 3.9e-39 166.0 307 40.4
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 3.9e-39 166.0 315 36.8
PGR042G2528 Punica granatum HOM05D001925 ORTHO05D004257 5.1e-39 165.6 325 36.6
PSO017G3573 Papaver somniferum HOM05D001925 ORTHO05D004257 1.5e-38 164.1 288 39.9
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 3.3e-38 162.9 315 36.8
unitig_749.g13536 Utricularia gibba HOM05D001925 ORTHO05D004257 4.3e-38 162.5 288 37.5
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 1.3e-37 161.0 310 35.5
Sc23g0002810 Simmondsia chinensis HOM05D001925 ORTHO05D004257 2.2e-37 160.2 243 44.0
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 3.7e-37 159.5 281 38.4
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 4.8e-37 159.1 319 36.4
PSO063G1799 Papaver somniferum HOM05D001925 ORTHO05D004257 2.4e-36 156.8 283 37.5
Psat3g108000 Pisum sativum HOM05D001925 ORTHO05D004257 2.4e-36 156.8 284 39.1
TAR636G0324 Trochodendron aralioides HOM05D001925 ORTHO05D004257 2.4e-36 156.8 264 38.3
BcaC01g06884 Brassica carinata HOM05D001925 ORTHO05D004257 2.0e-35 153.7 286 37.4
CAN.G116.9 Capsicum annuum HOM05D001925 ORTHO05D004257 2.6e-35 153.3 311 34.7
C03p39260 Brassica napus HOM05D001925 ORTHO05D004257 3.4e-35 152.9 285 37.2
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 4.5e-35 152.5 284 38.0
BcaB01g02169 Brassica carinata HOM05D001925 ORTHO05D004257 1.3e-34 151.0 277 37.9
Lalb_Chr11g0072911 Lupinus albus HOM05D001925 ORTHO05D004257 5.0e-34 149.1 267 39.7
BolC3t16197H Brassica oleracea HOM05D001925 ORTHO05D004257 1.4e-33 147.5 284 36.6
SGA_v2.0_scaffold55G19707 Striga asiatica HOM05D001925 ORTHO05D004257 1.9e-33 147.1 248 39.9
AUR62022581 Chenopodium quinoa HOM05D001925 ORTHO05D004257 2.5e-33 146.7 262 37.8
HPP92_025783 Vanilla planifolia HOM05D001925 ORTHO05D004257 4.2e-33 146.0 263 35.4
ATR0680G064 Amborella trichopoda HOM05D001925 ORTHO05D004257 2.7e-32 143.3 304 35.9
A03p32220 Brassica napus HOM05D001925 ORTHO05D004257 3.6e-32 142.9 287 36.2
BraA03t12392Z Brassica rapa HOM05D001925 ORTHO05D004257 3.6e-32 142.9 287 36.2
HanXRQChr13g0426611 Helianthus annuus HOM05D001925 ORTHO05D004257 3.6e-32 142.9 212 40.1
PGSC0003DMG400006504 Solanum tuberosum HOM05D001925 ORTHO05D004257 7.9e-32 141.7 275 37.1
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 3.9e-31 139.4 283 38.5
Eucgr.E00120 Eucalyptus grandis HOM05D001925 ORTHO05D004257 4.3e-30 136.0 264 36.0
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea HOM05D001925 ORTHO05D004257 2.8e-29 133.3 305 37.4
SalBow3G4075 Salvia bowleyana HOM05D001925 ORTHO05D004257 3.7e-29 132.9 291 32.6
Hund27265 Selenicereus undatus HOM05D001925 ORTHO05D004257 3.7e-29 132.9 265 37.4
ECA236G3632 Erigeron canadensis HOM05D001925 ORTHO05D004257 6.3e-29 132.1 296 33.8
Medtr2g027720 Medicago truncatula HOM05D001925 ORTHO05D004257 1.0e-26 124.8 231 36.8
EL10Ac1g00401 Beta vulgaris HOM05D001925 ORTHO05D004257 8.5e-26 121.7 237 35.0
Os04g0165300 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 7.2e-25 118.6 243 34.6
Lj6A572T61 Lonicera japonica HOM05D001925 ORTHO05D004257 2.7e-24 116.7 190 36.8
AUR62004372 Chenopodium quinoa HOM05D001925 ORTHO05D004257 4.7e-24 115.9 259 35.1
HPP92_014720 Vanilla planifolia HOM05D001925 ORTHO05D004257 6.1e-24 115.5 300 32.0
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 1.0e-23 114.8 289 37.0
Lsat_1_v5_gn_7_4301 Lactuca sativa HOM05D001925 ORTHO05D004257 1.0e-23 114.8 288 31.6
C04p06870 Brassica napus HOM05D001925 ORTHO05D004257 1.4e-23 114.4 69 85.5
BolC4t22309H Brassica oleracea HOM05D001925 ORTHO05D004257 1.4e-23 114.4 69 85.5
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 1.4e-23 114.4 322 30.7
A05p05940 Brassica napus HOM05D001925 ORTHO05D004257 1.5e-22 110.9 65 87.7
BraA05t19557Z Brassica rapa HOM05D001925 ORTHO05D004257 1.5e-22 110.9 65 87.7
Zm00001eb318800 Zea mays HOM05D001925 ORTHO05D004257 2.6e-22 110.2 236 32.6
MBI17_g35262_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 5.7e-22 109.0 109 46.8
Zm00001eb103050 Zea mays HOM05D001925 ORTHO05D004257 2.8e-21 106.7 223 35.4
CDE08G0634 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 4.8e-21 105.9 325 30.5
unitig_8.g3798 Utricularia gibba HOM05D001925 ORTHO05D004257 1.1e-20 104.8 274 30.7
CDE05G2831 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 4.1e-20 102.8 102 51.0
Os02g0821900 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 5.3e-20 102.4 280 29.6
MBI17_g42624_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 6.9e-20 102.1 151 40.4
Migut.B01767 Erythranthe guttata HOM05D001925 ORTHO05D004257 3.4e-19 99.8 301 31.6
Zm00001eb191080 Zea mays HOM05D001925 ORTHO05D004257 3.4e-19 99.8 258 32.2
Zm00001eb305930 Zea mays HOM05D001925 ORTHO05D004257 5.5e-17 92.4 252 29.4
SGA_v2.0_scaffold4G02300 Striga asiatica HOM05D001925 ORTHO05D004257 1.6e-16 90.9 264 30.3
BcaC02g12160 Brassica carinata HOM05D001925 ORTHO05D004257 6.1e-16 89.0 102 52.9
HanXRQChr04g0121161 Helianthus annuus HOM05D001925 ORTHO05D004257 1.4e-15 87.8 222 27.9
Os07g0418200 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 5.2e-15 85.9 245 29.8
SGA_v2.0_scaffold95G28831 Striga asiatica HOM05D001925 ORTHO05D004257 8.8e-15 85.1 234 32.5
SEGI_07880 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 5.7e-14 82.4 350 23.4
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 9.7e-14 81.6 184 36.4
Zm00001eb415260 Zea mays HOM05D001925 ORTHO05D004257 1.7e-13 80.9 207 31.9
Zm00001eb087910 Zea mays HOM05D001925 ORTHO05D004257 2.2e-13 80.5 204 31.4
Mapoly0022s0094 Marchantia polymorpha HOM05D001925 ORTHO05D004257 6.3e-13 79.0 91 45.1
SMO364G0089 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 4.7e-08 62.8 141 30.5
SMO112G0035 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 1.4e-07 61.2 152 30.9
Pp3c15_17300 Physcomitrium patens HOM05D001925 ORTHO05D004257 1.2e-06 58.2 119 34.5
Pp3c9_18340 Physcomitrium patens HOM05D001925 ORTHO05D004257 2.6e-06 57.0 119 33.6
SEGI_37364 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 3.3e-06 56.6 190 28.9


User provided reference genes

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