Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 8.0e-65 250.4 134 100.0
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 2.7e-57 225.3 134 91.8
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 8.3e-54 213.8 132 87.9
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 9.1e-53 210.3 132 86.4
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 2.0e-52 209.1 134 85.1
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 4.2e-50 201.4 119 89.9
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 2.1e-49 199.1 130 83.8
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 2.1e-49 199.1 130 83.8
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 2.1e-49 199.1 130 83.8
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 5.2e-48 194.5 118 87.3
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 5.7e-47 191.0 132 77.3
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 5.7e-47 191.0 132 77.3
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 7.0e-45 184.1 127 76.4
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 2.0e-44 182.6 116 83.6
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 2.0e-44 182.6 127 75.6
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 3.5e-44 181.8 118 80.5
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 5.9e-44 181.0 117 82.1
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 7.7e-44 180.6 118 79.7
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 6.6e-43 177.6 125 77.6
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 1.9e-42 176.0 113 82.3
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 3.3e-42 175.3 116 79.3
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 5.6e-42 174.5 127 74.8
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 7.2e-42 174.1 116 79.3
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 7.2e-42 174.1 127 74.8
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 9.5e-42 173.7 127 73.2
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 2.1e-41 172.6 106 85.8
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 4.7e-41 171.4 117 76.9
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 8.0e-41 170.6 117 76.9
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 8.0e-41 170.6 119 75.6
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 2.3e-40 169.1 123 71.5
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 3.0e-40 168.7 117 76.9
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 3.0e-40 168.7 129 70.5
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 4.0e-40 168.3 141 68.8
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 4.0e-40 168.3 116 75.0
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 4.0e-40 168.3 116 75.0
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 8.9e-40 167.2 126 72.2
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 8.9e-40 167.2 119 73.9
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.2e-39 166.8 118 75.4
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 1.5e-39 166.4 117 74.4
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 1.5e-39 166.4 122 73.0
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 2.6e-39 165.6 127 72.4
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 2.6e-39 165.6 117 76.1
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.4e-39 164.9 127 71.7
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 5.7e-39 164.5 123 70.7
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 5.7e-39 164.5 118 75.4
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 9.8e-39 163.7 119 72.3
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 9.8e-39 163.7 118 73.7
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 9.8e-39 163.7 108 81.5
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 9.8e-39 163.7 116 74.1
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 9.8e-39 163.7 116 74.1
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.3e-38 163.3 100 86.0
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 1.7e-38 162.9 118 74.6
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 1.7e-38 162.9 118 72.9
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 2.9e-38 162.2 130 70.8
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 4.9e-38 161.4 118 72.0
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.1e-37 160.2 107 79.4
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 1.1e-37 160.2 127 70.9
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 4.1e-37 158.3 116 73.3
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 5.4e-37 157.9 128 68.0
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 5.4e-37 157.9 128 68.0
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 5.4e-37 157.9 116 73.3
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 9.2e-37 157.1 113 71.7
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 9.2e-37 157.1 113 71.7
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 9.2e-37 157.1 119 70.6
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 1.2e-36 156.8 146 61.6
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.2e-36 156.8 118 71.2
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 1.6e-36 156.4 124 71.0
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 1.6e-36 156.4 119 70.6
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 2.0e-36 156.0 120 68.3
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 2.7e-36 155.6 127 67.7
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 5.9e-36 154.5 120 70.0
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 1.0e-35 153.7 113 71.7
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 2.3e-35 152.5 122 71.3
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 2.3e-35 152.5 114 71.9
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 5.0e-35 151.4 116 69.0
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 6.6e-35 151.0 119 70.6
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 6.6e-35 151.0 119 70.6
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 1.1e-34 150.2 118 69.5
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 1.5e-34 149.8 122 65.6
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 7.3e-34 147.5 101 78.2
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 9.5e-34 147.1 102 78.4
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 9.5e-34 147.1 114 69.3
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 3.6e-33 145.2 111 73.0
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 4.7e-33 144.8 119 64.7
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 8.0e-33 144.1 118 65.3
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.0e-32 143.7 113 69.0
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 5.2e-32 141.4 120 67.5
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 1.5e-31 139.8 120 59.2
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 1.6e-28 129.8 132 56.8
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 2.0e-28 129.4 114 64.9
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 1.0e-27 127.1 98 67.3
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.0e-27 124.8 113 61.9
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 4.3e-26 121.7 127 58.3
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 1.6e-25 119.8 111 59.5
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 1.4e-24 116.7 115 59.1
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 2.3e-24 115.9 115 61.7
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 5.8e-23 111.3 112 57.1
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 7.5e-23 110.9 112 57.1
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 4.9e-22 108.2 85 68.2
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.3e-19 99.4 109 54.1
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 8.6e-19 97.4 114 46.5
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 4.7e-17 91.7 68 67.6
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 1.4e-16 90.1 95 56.8
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-14 83.2 102 41.2
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 4.9e-14 81.6 65 61.5
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 2.4e-13 79.3 100 46.0
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 4.1e-13 78.6 51 80.4
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 4.7e-09 65.1 51 70.6
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 8.1e-09 64.3 54 61.1


User provided reference genes

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