Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 0.0e+00 1176.0 628 100.0
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 4.3e-312 1074.3 633 90.0
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 1.8e-284 982.2 632 83.2
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 4.9e-250 867.8 641 77.2
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 2.4e-249 865.5 645 75.7
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 3.0e-223 778.9 642 72.0
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 3.3e-161 572.8 621 62.2
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 1.7e-157 560.5 630 60.5
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 4.3e-153 545.8 625 60.6
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 1.9e-148 530.4 626 60.1
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 9.6e-137 491.5 685 48.5
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 2.5e-132 476.9 626 57.0
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 7.6e-126 455.3 685 47.0
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 7.3e-68 262.7 702 33.5
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 2.0e-65 254.6 699 33.0
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 2.2e-64 251.1 711 33.2
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 1.1e-63 248.8 688 33.9
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 7.0e-63 246.1 699 34.6
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 2.3e-61 241.1 640 34.8
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 6.6e-61 239.6 710 33.8
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 8.6e-61 239.2 710 32.5
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 7.3e-60 236.1 541 36.4
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 2.8e-59 234.2 640 35.0
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 3.6e-59 233.8 676 33.6
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 4.7e-59 233.4 687 32.9
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 4.0e-58 230.3 618 34.1
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 7.5e-57 226.1 649 33.4
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 7.5e-57 226.1 649 33.4
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 9.8e-57 225.7 720 32.5
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 9.8e-57 225.7 677 32.9
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 7.1e-55 219.5 597 33.8
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.6e-54 218.4 699 32.3
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 3.5e-54 217.2 652 32.4
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 3.0e-53 214.2 630 32.4
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 1.9e-52 211.5 668 32.6
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 3.3e-52 210.7 687 30.7
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.1e-50 205.7 428 37.4
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 2.3e-50 204.5 633 31.0
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 6.8e-50 203.0 585 33.2
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 1.2e-49 202.2 698 31.9
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 2.0e-49 201.4 431 37.1
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 1.3e-48 198.7 447 36.9
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 4.9e-48 196.8 651 31.8
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 4.1e-47 193.7 666 30.0
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 5.4e-47 193.4 624 31.6
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 1.2e-46 192.2 676 30.5
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 1.2e-46 192.2 622 30.2
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 1.3e-45 188.7 579 30.7
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 2.5e-44 184.5 702 29.5
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 5.6e-44 183.3 646 30.7
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 8.1e-43 179.5 634 30.6
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 1.4e-42 178.7 634 29.7
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 2.4e-42 177.9 650 28.9
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.2e-41 175.6 496 34.5
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 1.2e-41 175.6 702 29.5
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 4.4e-41 173.7 471 34.8
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 9.9e-41 172.6 678 30.7
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 4.9e-40 170.2 653 29.2
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 8.4e-40 169.5 641 29.3
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 3.2e-39 167.5 631 28.5
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 5.4e-39 166.8 618 29.9
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 1.6e-38 165.2 696 29.3
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 7.8e-38 162.9 697 28.3
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 1.7e-37 161.8 590 31.5
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 3.0e-37 161.0 478 33.1
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 6.6e-37 159.8 743 28.3
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 5.6e-36 156.8 639 30.2
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 7.3e-36 156.4 592 29.1
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 2.1e-35 154.8 612 29.4
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 4.8e-35 153.7 450 33.1
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 8.1e-35 152.9 701 29.1
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 9.0e-34 149.4 601 28.5
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 2.0e-33 148.3 675 28.4
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 9.9e-33 146.0 582 30.4
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 6.4e-32 143.3 669 30.0
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 6.4e-32 143.3 590 29.7
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 8.4e-32 142.9 597 30.0
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 1.1e-31 142.5 699 27.3
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 2.4e-31 141.4 588 29.3
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 7.1e-31 139.8 544 28.9
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 1.3e-29 135.6 381 35.2
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 2.3e-29 134.8 488 31.6
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.3e-29 134.8 556 29.1
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.9e-28 131.7 472 32.4
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 4.3e-28 130.6 588 29.3
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 2.4e-26 124.8 459 29.2
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 1.5e-25 122.1 271 37.3
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 3.4e-25 120.9 461 27.3
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 4.5e-25 120.6 466 29.0
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 5.6e-20 103.6 587 27.4
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 1.1e-18 99.4 609 27.6
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 2.4e-18 98.2 530 28.1
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 3.1e-18 97.8 551 29.4
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 3.8e-16 90.9 263 32.7
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 4.9e-16 90.5 492 25.6
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 7.9e-14 83.2 284 32.4
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 2.3e-13 81.6 675 25.3
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 6.2e-11 73.6 505 26.7
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 2.4e-10 71.6 437 25.6
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 4.1e-10 70.9 295 28.8
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 1.5e-09 68.9 159 35.8
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 5.0e-08 63.9 316 30.4
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 6.5e-08 63.5 108 38.0
Duzib093G0367 Durio zibethinus HOM05D007315 ORTHO05D008940 9.3e-07 59.7 508 25.2
Actinidia39246 Actinidia chinensis HOM05D007315 ORTHO05D008940 2.1e-06 58.5 291 26.5
SEGI_20190 Sequoiadendron giganteum HOM05D007315 ORTHO05D008940 7.9e-06 56.6 179 31.8


User provided reference genes

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